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GKL on arm64 build failure
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| [0mI: Running in no-targz mode[0m | |
| [0mI: pbuilder: network access will be disabled during build[0m | |
| [0mI: Current time: Tue Nov 17 18:32:33 CET 2020[0m | |
| [0mI: pbuilder-time-stamp: 1605634353[0m | |
| [0mI: copying local configuration[0m | |
| [1;33mW: --override-config is not set; not updating apt.conf Read the manpage for details.[0m | |
| [0mI: mounting /proc filesystem[0m | |
| [0mI: mounting /sys filesystem[0m | |
| [0mI: creating /{dev,run}/shm[0m | |
| [0mI: mounting /dev/pts filesystem[0m | |
| [0mI: redirecting /dev/ptmx to /dev/pts/ptmx[0m | |
| [0mI: Mounting /home/michael/.ccache/[0m | |
| [0mI: policy-rc.d already exists[0m | |
| [0mI: Obtaining the cached apt archive contents[0m | |
| [0mI: Setting up ccache[0m | |
| [0mI: Copying source file[0m | |
| [0mI: copying [/home/michael/debian/gkl_0.8.6+dfsg-2~rc0.dsc][0m | |
| [0mI: copying [/home/michael/debian/gkl_0.8.6+dfsg.orig.tar.xz][0m | |
| [0mI: copying [/home/michael/debian/gkl_0.8.6+dfsg-2~rc0.debian.tar.xz][0m | |
| [0mI: Extracting source[0m | |
| dpkg-source: warning: extracting unsigned source package (gkl_0.8.6+dfsg-2~rc0.dsc) | |
| dpkg-source: info: extracting gkl in gkl-0.8.6+dfsg | |
| dpkg-source: info: unpacking gkl_0.8.6+dfsg.orig.tar.xz | |
| dpkg-source: info: unpacking gkl_0.8.6+dfsg-2~rc0.debian.tar.xz | |
| dpkg-source: info: using patch list from debian/patches/series | |
| dpkg-source: info: applying fix_debian_build.patch | |
| [0mI: using fakeroot in build.[0m | |
| [0mI: Installing the build-deps[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2145780/tmp/hooks/D05deps starting[0m | |
| + DEPSPATH=/ | |
| + [ -n ] | |
| + set +ex | |
| [0mI: user script /var/cache/pbuilder/build/cow.2145780/tmp/hooks/D05deps finished[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2145780/tmp/hooks/D10-man-db starting[0m | |
| I: Preseed man-db/auto-update to false | |
| [0mI: user script /var/cache/pbuilder/build/cow.2145780/tmp/hooks/D10-man-db finished[0m | |
| [0mI: -> Attempting to satisfy build-dependencies[0m | |
| Note, using file '/build/gkl_0.8.6+dfsg-2~rc0.dsc' to get the build dependencies | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| The following NEW packages will be installed: | |
| ant ant-optional antlr autoconf automake autopoint autotools-dev bnd | |
| bsdextrautils ca-certificates ca-certificates-java cmake cmake-data | |
| dctrl-tools debhelper default-jdk default-jdk-doc default-jdk-headless | |
| default-jre default-jre-headless devscripts dh-autoreconf | |
| dh-strip-nondeterminism dirmngr dwz fakeroot file fontconfig-config | |
| fonts-dejavu-core gettext gettext-base gnupg gnupg-l10n gnupg-utils gpg | |
| gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm gradle | |
| gradle-debian-helper groff-base groovy intltool-debian ivy java-common | |
| java-wrappers javahelper junit4 libactivation-java libantlr-java | |
| libaopalliance-java libapache-pom-java libarchive-zip-perl libarchive13 | |
| libargs4j-java libasm-java libasound2 libasound2-data libassuan0 | |
| libatinject-jsr330-api-java libavahi-client3 libavahi-common-data | |
| libavahi-common3 libb-hooks-op-check-perl libbcel-java libbcpg-java | |
| libbcprov-java libbrotli1 libbsd0 libbsf-java libbsh-java libcdi-api-java | |
| libclass-method-modifiers-perl libcodemodel-java libcommons-cli-java | |
| libcommons-codec-java libcommons-collections3-java libcommons-compress-java | |
| libcommons-io-java libcommons-jexl2-java libcommons-lang-java | |
| libcommons-lang3-java libcommons-logging-java libcommons-parent-java | |
| libcroco3 libcups2 libcurl4 libdbus-1-3 libdd-plist-java libdebhelper-perl | |
| libdevel-callchecker-perl libdom4j-java libdrm-amdgpu1 libdrm-common | |
| libdrm-nouveau2 libdrm-radeon1 libdrm2 libdtd-parser-java | |
| libdynaloader-functions-perl libedit2 libel-api-java libelf1 | |
| libencode-locale-perl libexpat1 libfakeroot libfastinfoset-java | |
| libfelix-framework-java libfelix-gogo-runtime-java libfelix-resolver-java | |
| libfile-homedir-perl libfile-listing-perl libfile-stripnondeterminism-perl | |
| libfile-which-perl libfindbugs-java libfontconfig1 libfreetype6 | |
| libgatk-native-bindings-java libgeronimo-annotation-1.3-spec-java | |
| libgeronimo-interceptor-3.0-spec-java libgif7 libgl1 libgl1-mesa-dri | |
| libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 | |
| libgoogle-gson-java libgradle-core-java libgradle-plugins-java libguava-java | |
| libguice-java libhamcrest-java libhawtjni-runtime-java libhtml-parser-perl | |
| libhtml-tagset-perl libhtml-tree-perl libhtsjdk-java libhttp-cookies-perl | |
| libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl | |
| libhttpclient-java libhttpcore-java libicu67 libimport-into-perl | |
| libio-html-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl | |
| libistack-commons-java libjansi-java libjansi-native-java libjarjar-java | |
| libjatl-java libjavaewah-java libjaxb-api-java libjaxb-java libjaxen-java | |
| libjcifs-java libjcip-annotations-java libjcommander-java | |
| libjformatstring-java libjgit-java libjline2-java libjna-java libjna-jni | |
| libjpeg62-turbo libjs-jquery libjsch-java libjsoncpp1 libjsoup-java | |
| libjsp-api-java libjsr305-java libjzlib-java libkryo-java libksba8 | |
| liblcms2-2 libldap-2.4-2 liblightcouch-java libllvm11 liblog4j2-java | |
| liblogback-java liblwp-mediatypes-perl liblwp-protocol-https-perl | |
| libmagic-mgc libmagic1 libmaven-file-management-java libmaven-parent-java | |
| libmaven-resolver-java libmaven-shared-io-java libmaven-shared-utils-java | |
| libmaven3-core-java libminlog-java libmodule-runtime-perl libmongodb-java | |
| libmoo-perl libnative-platform-java libnative-platform-jni libncurses6 | |
| libnekohtml-java libnet-http-perl libnet-ssleay-perl libnghttp2-14 | |
| libngs-java libngs-sdk-dev libngs-sdk2 libnpth0 libnspr4 libnss3 | |
| libobjenesis-java libosgi-annotation-java libosgi-compendium-java | |
| libosgi-core-java libparams-classify-perl libpcsclite1 libpipeline1 | |
| libplexus-archiver-java libplexus-cipher-java libplexus-classworlds-java | |
| libplexus-component-annotations-java libplexus-container-default-java | |
| libplexus-container-default1.5-java libplexus-interpolation-java | |
| libplexus-io-java libplexus-sec-dispatcher-java libplexus-utils2-java | |
| libpng16-16 libpolyglot-maven-java libprocps8 libpsl5 libpython3-stdlib | |
| libpython3.8-minimal libpython3.8-stdlib libqdox-java libreadline8 | |
| libreflectasm-java librelaxng-datatype-java librhash0 librhino-java | |
| librngom-java librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db | |
| libsensors-config libsensors5 libservlet-api-java libservlet3.1-java | |
| libsigsegv2 libsimple-http-java libsisu-guice-java libsisu-inject-java | |
| libsisu-ioc-java libsisu-plexus-java libslf4j-java libsnappy-java | |
| libsnappy-jni libsnappy1v5 libssh2-1 libstax-ex-java libstreambuffer-java | |
| libstrictures-perl libsub-override-perl libsub-quote-perl libtimedate-perl | |
| libtool libtry-tiny-perl libtxw2-java libuchardet0 liburi-perl libuv1 | |
| libwagon-file-java libwagon-http-java libwagon-provider-api-java | |
| libwebsocket-api-java libwww-perl libwww-robotrules-perl libx11-6 | |
| libx11-data libx11-xcb1 libxau6 libxbean-reflect-java libxcb-dri2-0 | |
| libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb-xfixes0 | |
| libxcb1 libxdamage1 libxdmcp6 libxerces2-java libxext6 libxfixes3 libxi6 | |
| libxml-commons-external-java libxml-commons-resolver1.1-java libxml2 | |
| libxpp3-java libxrender1 libxshmfence1 libxsom-java libxstream-java libxtst6 | |
| libxxf86vm1 libxz-java libyaml-snake-java libz3-4 m4 mailcap man-db | |
| maven-repo-helper media-types mime-support netbase node-jquery | |
| openjdk-11-doc openjdk-11-jdk openjdk-11-jdk-headless openjdk-11-jre | |
| openjdk-11-jre-headless openssl patchutils perl-openssl-defaults | |
| pinentry-curses po-debconf procps python3 python3-minimal python3.8 | |
| python3.8-minimal readline-common sensible-utils testng ucf unzip wdiff | |
| x11-common yasm zlib1g-dev | |
| 0 upgraded, 343 newly installed, 0 to remove and 0 not upgraded. | |
| Need to get 312 MB/436 MB of archives. | |
| After this operation, 1116 MB of additional disk space will be used. | |
| Get:1 http://deb.debian.org/debian sid/main arm64 libreadline8 arm64 8.1~rc2-2 [160 kB] | |
| Get:2 http://incoming.debian.org/debian-buildd buildd-unstable/main arm64 bsdextrautils arm64 2.36.1-1 [136 kB] | |
| Get:3 http://deb.debian.org/debian sid/main arm64 libnspr4 arm64 2:4.29-1 [105 kB] | |
| Get:4 http://deb.debian.org/debian sid/main arm64 libnss3 arm64 2:3.58-1 [1209 kB] | |
| Get:5 http://deb.debian.org/debian sid/main arm64 libdbus-1-3 arm64 1.12.20-1 [207 kB] | |
| Get:6 http://deb.debian.org/debian sid/main arm64 libcups2 arm64 2.3.3-3 [333 kB] | |
| Get:7 http://deb.debian.org/debian sid/main arm64 libasound2 arm64 1.2.3.2-1 [325 kB] | |
| Get:8 http://deb.debian.org/debian sid/main arm64 libpcsclite1 arm64 1.9.0-1 [58.8 kB] | |
| Get:9 http://deb.debian.org/debian sid/main arm64 libxi6 arm64 2:1.7.10-1 [81.7 kB] | |
| Get:10 http://deb.debian.org/debian sid/main arm64 libxtst6 arm64 2:1.2.3-1 [26.7 kB] | |
| Get:11 http://deb.debian.org/debian sid/main arm64 openjdk-11-jre-headless arm64 11.0.9.1+1-1 [36.9 MB] | |
| Get:12 http://incoming.debian.org/debian-buildd buildd-unstable/main arm64 libfakeroot arm64 1.25.3-1.1 [47.9 kB] | |
| Get:13 http://incoming.debian.org/debian-buildd buildd-unstable/main arm64 fakeroot arm64 1.25.3-1.1 [86.8 kB] | |
| Get:14 http://deb.debian.org/debian sid/main arm64 default-jre-headless arm64 2:1.11-72 [10.9 kB] | |
| Get:15 http://deb.debian.org/debian sid/main arm64 junit4 all 4.13.1-1 [346 kB] | |
| Get:16 http://deb.debian.org/debian sid/main arm64 libosgi-annotation-java all 7.0.0-2 [10.1 kB] | |
| Get:17 http://deb.debian.org/debian sid/main arm64 libyaml-snake-java all 1.27+ds-1 [297 kB] | |
| Get:18 http://deb.debian.org/debian sid/main arm64 libldap-2.4-2 arm64 2.4.56+dfsg-1 [221 kB] | |
| Get:19 http://deb.debian.org/debian sid/main arm64 libuv1 arm64 1.40.0-1 [126 kB] | |
| Get:20 http://deb.debian.org/debian sid/main arm64 libelf1 arm64 0.182-1 [165 kB] | |
| Get:21 http://deb.debian.org/debian sid/main arm64 libglvnd0 arm64 1.3.2-1 [44.3 kB] | |
| Get:22 http://deb.debian.org/debian sid/main arm64 libdrm-common all 2.4.103-1 [14.7 kB] | |
| Get:23 http://deb.debian.org/debian sid/main arm64 libdrm2 arm64 2.4.103-1 [41.5 kB] | |
| Get:24 http://deb.debian.org/debian sid/main arm64 libglapi-mesa arm64 20.2.2-1 [80.3 kB] | |
| Get:25 http://deb.debian.org/debian sid/main arm64 libx11-xcb1 arm64 2:1.6.12-1 [203 kB] | |
| Get:26 http://deb.debian.org/debian sid/main arm64 libdrm-amdgpu1 arm64 2.4.103-1 [27.9 kB] | |
| Get:27 http://deb.debian.org/debian sid/main arm64 libdrm-nouveau2 arm64 2.4.103-1 [26.0 kB] | |
| Get:28 http://deb.debian.org/debian sid/main arm64 libdrm-radeon1 arm64 2.4.103-1 [29.2 kB] | |
| Get:29 http://deb.debian.org/debian sid/main arm64 libz3-4 arm64 4.8.9-1 [5989 kB] | |
| Get:30 http://deb.debian.org/debian sid/main arm64 libllvm11 arm64 1:11.0.0-5 [14.7 MB] | |
| Get:31 http://deb.debian.org/debian sid/main arm64 libgl1-mesa-dri arm64 20.2.2-1 [6344 kB] | |
| Get:32 http://deb.debian.org/debian sid/main arm64 libglx-mesa0 arm64 20.2.2-1 [186 kB] | |
| Get:33 http://deb.debian.org/debian sid/main arm64 libglx0 arm64 1.3.2-1 [32.0 kB] | |
| Get:34 http://deb.debian.org/debian sid/main arm64 libgl1 arm64 1.3.2-1 [91.4 kB] | |
| Get:35 http://deb.debian.org/debian sid/main arm64 libgif7 arm64 5.1.9-1 [44.6 kB] | |
| Get:36 http://deb.debian.org/debian sid/main arm64 openjdk-11-jre arm64 11.0.9.1+1-1 [32.8 kB] | |
| Get:37 http://deb.debian.org/debian sid/main arm64 default-jre arm64 2:1.11-72 [1044 B] | |
| Get:38 http://deb.debian.org/debian sid/main arm64 openjdk-11-jdk-headless arm64 11.0.9.1+1-1 [215 MB] | |
| Get:39 http://deb.debian.org/debian sid/main arm64 default-jdk-headless arm64 2:1.11-72 [1100 B] | |
| Get:40 http://deb.debian.org/debian sid/main arm64 openjdk-11-jdk arm64 11.0.9.1+1-1 [6793 kB] | |
| Get:41 http://deb.debian.org/debian sid/main arm64 default-jdk arm64 2:1.11-72 [1056 B] | |
| Get:42 http://deb.debian.org/debian sid/main arm64 openjdk-11-doc all 11.0.9.1+1-1 [13.5 MB] | |
| Get:43 http://deb.debian.org/debian sid/main arm64 default-jdk-doc arm64 2:1.11-72 [11.0 kB] | |
| Get:44 http://deb.debian.org/debian sid/main arm64 libassuan0 arm64 2.5.3-7.1 [48.0 kB] | |
| Get:45 http://deb.debian.org/debian sid/main arm64 gpgconf arm64 2.2.20-1 [524 kB] | |
| Get:46 http://deb.debian.org/debian sid/main arm64 libksba8 arm64 1.4.0-2 [114 kB] | |
| Get:47 http://deb.debian.org/debian sid/main arm64 libnpth0 arm64 1.6-3 [18.6 kB] | |
| Get:48 http://deb.debian.org/debian sid/main arm64 dirmngr arm64 2.2.20-1 [720 kB] | |
| Get:49 http://deb.debian.org/debian sid/main arm64 gnupg-utils arm64 2.2.20-1 [852 kB] | |
| Get:50 http://deb.debian.org/debian sid/main arm64 gpg arm64 2.2.20-1 [853 kB] | |
| Get:51 http://deb.debian.org/debian sid/main arm64 pinentry-curses arm64 1.1.0-4 [63.0 kB] | |
| Get:52 http://deb.debian.org/debian sid/main arm64 gpg-agent arm64 2.2.20-1 [626 kB] | |
| Get:53 http://deb.debian.org/debian sid/main arm64 gpg-wks-client arm64 2.2.20-1 [499 kB] | |
| Get:54 http://deb.debian.org/debian sid/main arm64 gpg-wks-server arm64 2.2.20-1 [494 kB] | |
| Get:55 http://deb.debian.org/debian sid/main arm64 gpgsm arm64 2.2.20-1 [609 kB] | |
| Get:56 http://deb.debian.org/debian sid/main arm64 libio-pty-perl arm64 1:1.15-1+b1 [36.2 kB] | |
| Get:57 http://deb.debian.org/debian sid/main arm64 libb-hooks-op-check-perl arm64 0.22-1+b3 [11.2 kB] | |
| Get:58 http://deb.debian.org/debian sid/main arm64 libdevel-callchecker-perl arm64 0.008-1+b2 [15.8 kB] | |
| Get:59 http://deb.debian.org/debian sid/main arm64 libparams-classify-perl arm64 0.015-1+b3 [25.5 kB] | |
| Get:60 http://deb.debian.org/debian sid/main arm64 liburi-perl all 5.05-1 [90.3 kB] | |
| Get:61 http://deb.debian.org/debian sid/main arm64 libhtml-parser-perl arm64 3.75-1+b1 [103 kB] | |
| Get:62 http://deb.debian.org/debian sid/main arm64 perl-openssl-defaults arm64 5 [7360 B] | |
| Get:63 http://deb.debian.org/debian sid/main arm64 libnet-ssleay-perl arm64 1.88-3+b1 [316 kB] | |
| Get:64 http://deb.debian.org/debian sid/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] | |
| Get:65 http://deb.debian.org/debian sid/main arm64 wdiff arm64 1.2.2-2+b1 [121 kB] | |
| Get:66 http://deb.debian.org/debian sid/main arm64 devscripts arm64 2.20.4 [1060 kB] | |
| Get:67 http://deb.debian.org/debian sid/main arm64 libcommons-io-java all 2.8.0-1 [279 kB] | |
| Get:68 http://deb.debian.org/debian sid/main arm64 libjna-jni arm64 5.5.0-1.1 [58.1 kB] | |
| Get:69 http://deb.debian.org/debian sid/main arm64 libnative-platform-jni arm64 0.14-5 [13.0 kB] | |
| Get:70 http://deb.debian.org/debian sid/main arm64 libsnappy-jni arm64 1.1.7.7-1 [7048 B] | |
| Get:71 http://deb.debian.org/debian sid/main arm64 libngs-sdk2 arm64 2.10.5-1 [45.3 kB] | |
| Get:72 http://deb.debian.org/debian sid/main arm64 libngs-sdk-dev arm64 2.10.5-1 [92.1 kB] | |
| Get:73 http://deb.debian.org/debian sid/main arm64 libngs-java arm64 2.10.5-1 [80.2 kB] | |
| Get:74 http://deb.debian.org/debian sid/main arm64 yasm arm64 1.3.0-2+b1 [352 kB] | |
| debconf: delaying package configuration, since apt-utils is not installed | |
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| Setting up libmoo-perl (2.004000-1) ... | |
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| Setting up liblog4j2-java (2.11.2-1) ... | |
| Setting up libsisu-inject-java (0.3.3-1) ... | |
| Setting up libsisu-plexus-java (0.3.3-3) ... | |
| Setting up libgl1:arm64 (1.3.2-1) ... | |
| Setting up gnupg (2.2.20-1) ... | |
| Setting up libplexus-archiver-java (3.6.0-2) ... | |
| Setting up libmaven3-core-java (3.6.3-1) ... | |
| Setting up libmaven-shared-io-java (3.0.0-3) ... | |
| Setting up libmaven-file-management-java (3.0.0-1) ... | |
| Setting up default-jre-headless (2:1.11-72) ... | |
| Setting up libwww-perl (6.49-1) ... | |
| Setting up openjdk-11-jre-headless:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode | |
| Setting up openjdk-11-jre:arm64 (11.0.9.1+1-1) ... | |
| Setting up maven-repo-helper (1.9.4) ... | |
| Setting up openjdk-11-jdk-headless:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode | |
| Setting up default-jre (2:1.11-72) ... | |
| Setting up antlr (2.7.7+dfsg-10) ... | |
| Setting up dh-autoreconf (19) ... | |
| Setting up default-jdk-headless (2:1.11-72) ... | |
| Setting up devscripts (2.20.4) ... | |
| Setting up ivy (2.4.0-5) ... | |
| Setting up ant (1.10.9-1) ... | |
| Setting up libcodemodel-java (2.6+jaxb2.3.0.1-9) ... | |
| Setting up openjdk-11-jdk:arm64 (11.0.9.1+1-1) ... | |
| update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode | |
| Setting up ca-certificates-java (20190909) ... | |
| /usr/bin/head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory | |
| Adding debian:ACCVRAIZ1.pem | |
| Adding debian:GTS_Root_R4.pem | |
| Adding debian:T-TeleSec_GlobalRoot_Class_3.pem | |
| Adding debian:Go_Daddy_Class_2_CA.pem | |
| Adding debian:Buypass_Class_3_Root_CA.pem | |
| Adding debian:GeoTrust_Universal_CA_2.pem | |
| Adding debian:SSL.com_Root_Certification_Authority_ECC.pem | |
| Adding debian:Taiwan_GRCA.pem | |
| Adding debian:Cybertrust_Global_Root.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem | |
| Adding debian:Certum_Trusted_Network_CA.pem | |
| Adding debian:Buypass_Class_2_Root_CA.pem | |
| Adding debian:QuoVadis_Root_CA_3.pem | |
| Adding debian:emSign_Root_CA_-_G1.pem | |
| Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem | |
| Adding debian:QuoVadis_Root_CA_2_G3.pem | |
| Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem | |
| Warning: there was a problem reading the certificate file /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem. Message: | |
| /etc/ssl/certs/NetLock_Arany_=Class_Gold=_F?tan?s?tv?ny.pem (No such file or directory) | |
| Adding debian:DigiCert_Trusted_Root_G4.pem | |
| Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:DigiCert_Global_Root_CA.pem | |
| Adding debian:AffirmTrust_Networking.pem | |
| Adding debian:SSL.com_Root_Certification_Authority_RSA.pem | |
| Adding debian:ISRG_Root_X1.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem | |
| Adding debian:Security_Communication_Root_CA.pem | |
| Adding debian:Comodo_AAA_Services_root.pem | |
| Adding debian:TWCA_Global_Root_CA.pem | |
| Adding debian:Amazon_Root_CA_4.pem | |
| Adding debian:CA_Disig_Root_R2.pem | |
| Adding debian:LuxTrust_Global_Root_2.pem | |
| Adding debian:ePKI_Root_Certification_Authority.pem | |
| Adding debian:SecureTrust_CA.pem | |
| Adding debian:TrustCor_RootCert_CA-2.pem | |
| Adding debian:emSign_ECC_Root_CA_-_G3.pem | |
| Adding debian:Amazon_Root_CA_3.pem | |
| Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem | |
| Adding debian:COMODO_Certification_Authority.pem | |
| Adding debian:GTS_Root_R2.pem | |
| Adding debian:SecureSign_RootCA11.pem | |
| Adding debian:Izenpe.com.pem | |
| Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem | |
| Adding debian:SwissSign_Silver_CA_-_G2.pem | |
| Adding debian:Hongkong_Post_Root_CA_3.pem | |
| Adding debian:AffirmTrust_Premium.pem | |
| Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:T-TeleSec_GlobalRoot_Class_2.pem | |
| Adding debian:Hongkong_Post_Root_CA_1.pem | |
| Adding debian:GTS_Root_R3.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem | |
| Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem | |
| Adding debian:USERTrust_RSA_Certification_Authority.pem | |
| Adding debian:UCA_Extended_Validation_Root.pem | |
| Adding debian:TrustCor_RootCert_CA-1.pem | |
| Adding debian:emSign_ECC_Root_CA_-_C3.pem | |
| Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem | |
| Adding debian:GlobalSign_Root_CA_-_R6.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_G2.pem | |
| Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem | |
| Adding debian:QuoVadis_Root_CA_3_G3.pem | |
| Adding debian:Network_Solutions_Certificate_Authority.pem | |
| Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem | |
| Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_G4.pem | |
| Adding debian:EC-ACC.pem | |
| Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem | |
| Adding debian:Sonera_Class_2_Root_CA.pem | |
| Adding debian:GTS_Root_R1.pem | |
| Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem | |
| Adding debian:GlobalSign_Root_CA_-_R3.pem | |
| Adding debian:Baltimore_CyberTrust_Root.pem | |
| Adding debian:COMODO_RSA_Certification_Authority.pem | |
| Adding debian:Certigna.pem | |
| Adding debian:DigiCert_Global_Root_G3.pem | |
| Adding debian:QuoVadis_Root_CA.pem | |
| Adding debian:certSIGN_ROOT_CA.pem | |
| Adding debian:Certigna_Root_CA.pem | |
| Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem | |
| Adding debian:AffirmTrust_Commercial.pem | |
| Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem | |
| Adding debian:UCA_Global_G2_Root.pem | |
| Adding debian:COMODO_ECC_Certification_Authority.pem | |
| Adding debian:USERTrust_ECC_Certification_Authority.pem | |
| Adding debian:Actalis_Authentication_Root_CA.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem | |
| Adding debian:DST_Root_CA_X3.pem | |
| Adding debian:Certum_Trusted_Network_CA_2.pem | |
| Adding debian:Security_Communication_RootCA2.pem | |
| Adding debian:TrustCor_ECA-1.pem | |
| Adding debian:GlobalSign_Root_CA_-_R2.pem | |
| Adding debian:Secure_Global_CA.pem | |
| Adding debian:E-Tugra_Certification_Authority.pem | |
| Adding debian:CFCA_EV_ROOT.pem | |
| Adding debian:Chambers_of_Commerce_Root_-_2008.pem | |
| Adding debian:GlobalSign_Root_CA.pem | |
| Adding debian:Starfield_Class_2_CA.pem | |
| Adding debian:emSign_Root_CA_-_C1.pem | |
| Adding debian:Atos_TrustedRoot_2011.pem | |
| Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem | |
| Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem | |
| Adding debian:DigiCert_Assured_ID_Root_G2.pem | |
| Adding debian:AffirmTrust_Premium_ECC.pem | |
| Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem | |
| Adding debian:DigiCert_Global_Root_G2.pem | |
| Adding debian:TWCA_Root_Certification_Authority.pem | |
| Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem | |
| Adding debian:QuoVadis_Root_CA_2.pem | |
| Adding debian:IdenTrust_Commercial_Root_CA_1.pem | |
| Adding debian:DigiCert_Assured_ID_Root_CA.pem | |
| Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem | |
| Adding debian:Amazon_Root_CA_2.pem | |
| Adding debian:XRamp_Global_CA_Root.pem | |
| Adding debian:SwissSign_Gold_CA_-_G2.pem | |
| Adding debian:QuoVadis_Root_CA_1_G3.pem | |
| Adding debian:Trustis_FPS_Root_CA.pem | |
| Adding debian:EE_Certification_Centre_Root_CA.pem | |
| Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem | |
| Adding debian:Global_Chambersign_Root_-_2008.pem | |
| Adding debian:Entrust_Root_Certification_Authority.pem | |
| Adding debian:SZAFIR_ROOT_CA2.pem | |
| Adding debian:Microsec_e-Szigno_Root_CA_2009.pem | |
| Adding debian:AC_RAIZ_FNMT-RCM.pem | |
| Adding debian:Amazon_Root_CA_1.pem | |
| Adding debian:DigiCert_Assured_ID_Root_G3.pem | |
| Adding debian:GDCA_TrustAUTH_R5_ROOT.pem | |
| Adding debian:TeliaSonera_Root_CA_v1.pem | |
| done. | |
| Setting up libtxw2-java (2.3.0.1-9) ... | |
| Setting up junit4 (4.13.1-1) ... | |
| Setting up liblwp-protocol-https-perl (6.09-1) ... | |
| Setting up groovy (2.4.20-1) ... | |
| update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode | |
| update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode | |
| Setting up debhelper (13.2.1) ... | |
| Setting up default-jdk (2:1.11-72) ... | |
| Setting up ant-optional (1.10.9-1) ... | |
| Setting up bnd (5.0.1-2) ... | |
| Setting up libgradle-core-java (4.4.1-12) ... | |
| Setting up libgradle-plugins-java (4.4.1-12) ... | |
| Setting up javahelper (0.77) ... | |
| Setting up gradle (4.4.1-12) ... | |
| Setting up libistack-commons-java (3.0.6-4) ... | |
| Setting up gradle-debian-helper (2.1) ... | |
| Setting up libjaxb-java (2.3.0.1-9) ... | |
| Setting up libhtsjdk-java (2.23.0+dfsg-2) ... | |
| Processing triggers for libc-bin (2.31-4) ... | |
| Processing triggers for ca-certificates (20200601) ... | |
| Updating certificates in /etc/ssl/certs... | |
| 0 added, 0 removed; done. | |
| Running hooks in /etc/ca-certificates/update.d... | |
| done. | |
| done. | |
| W: --force-yes is deprecated, use one of the options starting with --allow instead. | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| fakeroot is already the newest version (1.25.3-1.1). | |
| fakeroot set to manually installed. | |
| debian-ports-archive-keyring is already the newest version (2019.11.05). | |
| eatmydata is already the newest version (105-9). | |
| 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. | |
| W: --force-yes is deprecated, use one of the options starting with --allow instead. | |
| [0mI: Copying back the cached apt archive contents[0m | |
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| [0mI: new cache content 'perl-openssl-defaults_5_arm64.deb' added[0m | |
| [0mI: new cache content 'default-jre-headless_2%3a1.11-72_arm64.deb' added[0m | |
| [0mI: new cache content 'gpgsm_2.2.20-1_arm64.deb' added[0m | |
| [0mI: new cache content 'openjdk-11-jdk-headless_11.0.9.1+1-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libz3-4_4.8.9-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libdrm-common_2.4.103-1_all.deb' added[0m | |
| [0mI: new cache content 'libnspr4_2%3a4.29-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libxtst6_2%3a1.2.3-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libdevel-callchecker-perl_0.008-1+b2_arm64.deb' added[0m | |
| [0mI: new cache content 'gpg-agent_2.2.20-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libglx0_1.3.2-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libnpth0_1.6-3_arm64.deb' added[0m | |
| [0mI: new cache content 'libxi6_2%3a1.7.10-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libngs-java_2.10.5-1_arm64.deb' added[0m | |
| [0mI: new cache content 'default-jdk_2%3a1.11-72_arm64.deb' added[0m | |
| [0mI: new cache content 'bsdextrautils_2.36.1-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libreadline8_8.1~rc2-2_arm64.deb' added[0m | |
| [0mI: new cache content 'libpcsclite1_1.9.0-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libdbus-1-3_1.12.20-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libgl1_1.3.2-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libio-pty-perl_1%3a1.15-1+b1_arm64.deb' added[0m | |
| [0mI: new cache content 'libdrm-radeon1_2.4.103-1_arm64.deb' added[0m | |
| [0mI: new cache content 'libglx-mesa0_20.2.2-1_arm64.deb' added[0m | |
| [0mI: new cache content 'default-jre_2%3a1.11-72_arm64.deb' added[0m | |
| [0mI: new cache content 'libuv1_1.40.0-1_arm64.deb' added[0m | |
| [0mI: Building the package[0m | |
| [0mI: Running cd /build/gkl-0.8.6+dfsg/ && env PATH="/usr/lib/ccache:/usr/sbin:/usr/bin:/sbin:/bin" HOME="/nonexistent" dpkg-buildpackage -us -uc [0m | |
| dpkg-buildpackage: info: source package gkl | |
| dpkg-buildpackage: info: source version 0.8.6+dfsg-2~rc0 | |
| dpkg-buildpackage: info: source distribution UNRELEASED | |
| dpkg-buildpackage: info: source changed by Michael R. Crusoe <michael.crusoe@gmail.com> | |
| dpkg-source --before-build . | |
| dpkg-buildpackage: info: host architecture arm64 | |
| debian/rules clean | |
| dh clean --buildsystem=gradle --with javahelper,jh_maven_repo_helper | |
| dh_auto_clean -O--buildsystem=gradle | |
| sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" | |
| sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" | |
| rm -Rf /build/gkl-0.8.6\+dfsg/.gradle /build/gkl-0.8.6\+dfsg/buildSrc/.gradle .m2 | |
| dh_autoreconf_clean -O--buildsystem=gradle | |
| jh_clean -O--buildsystem=gradle | |
| rm -fr debian/_jh_manifest* debian/_jh_build* | |
| rm -fr debian/.eclipse-build | |
| rm -f debian/orbitdeps.debhelper | |
| mh_clean -O--buildsystem=gradle | |
| debian/rules override_dh_clean | |
| make[1]: Entering directory '/build/gkl-0.8.6+dfsg' | |
| dh_clean | |
| rm -f debian/debhelper-build-stamp | |
| rm -rf debian/.debhelper/ | |
| rm -f -- debian/libgkl-java.substvars debian/libgkl-jni.substvars debian/files | |
| rm -fr -- debian/libgkl-java/ debian/tmp/ debian/libgkl-jni/ | |
| find . \( \( \ | |
| \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ | |
| \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ | |
| -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ | |
| -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ | |
| -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ | |
| \) -exec rm -f {} + \) -o \ | |
| \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) | |
| # also remove bai files that are left after tests | |
| rm -f debian/bd-temp-substvars | |
| rm -f debian/bd.substvars | |
| make[1]: Leaving directory '/build/gkl-0.8.6+dfsg' | |
| dpkg-source -b . | |
| dpkg-source: info: using source format '3.0 (quilt)' | |
| dpkg-source: info: building gkl using existing ./gkl_0.8.6+dfsg.orig.tar.xz | |
| dpkg-source: info: using patch list from debian/patches/series | |
| dpkg-source: info: building gkl in gkl_0.8.6+dfsg-2~rc0.debian.tar.xz | |
| dpkg-source: info: building gkl in gkl_0.8.6+dfsg-2~rc0.dsc | |
| debian/rules build | |
| dh build --buildsystem=gradle --with javahelper,jh_maven_repo_helper | |
| dh_update_autotools_config -O--buildsystem=gradle | |
| dh_autoreconf -O--buildsystem=gradle | |
| dh_auto_configure -O--buildsystem=gradle | |
| jh_linkjars -O--buildsystem=gradle | |
| debian/rules override_dh_auto_build | |
| make[1]: Entering directory '/build/gkl-0.8.6+dfsg' | |
| dh_auto_build -- jar | |
| mkdir -p .gradle/init.d | |
| cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ | |
| gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=gkl -Dfile.encoding=UTF-8 --parallel --max-workers=8 jar | |
| Initialized native services in: /build/gkl-0.8.6+dfsg/.gradle/native | |
| To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. | |
| Starting process 'Gradle build daemon'. Working directory: /build/gkl-0.8.6+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-11-openjdk-arm64/bin/java -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 | |
| Successfully started process 'Gradle build daemon' | |
| An attempt to start the daemon took 5.537 secs. | |
| The client will now receive all logging from the daemon (pid: 2181370). The daemon log file: /build/gkl-0.8.6+dfsg/.gradle/daemon/4.4.1/daemon-2181370.out.log | |
| Daemon will be stopped at the end of the build stopping after processing | |
| Closing daemon's stdin at end of input. | |
| The daemon will no longer process any standard input. | |
| Using 8 worker leases. | |
| Creating new cache for fileHashes, path /build/gkl-0.8.6+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@9ec696a | |
| Creating new cache for resourceHashesCache, path /build/gkl-0.8.6+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@9ec696a | |
| Creating new cache for fileHashes, path /build/gkl-0.8.6+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@3b4d4b34 | |
| Starting Build | |
| Compiling initialization script '/build/gkl-0.8.6+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. | |
| Creating new cache for metadata-1.1/results, path /build/gkl-0.8.6+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@37bc9456 | |
| Compiling initialization script '/build/gkl-0.8.6+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. | |
| Settings evaluated using settings file '/build/gkl-0.8.6+dfsg/settings.gradle'. | |
| Settings file not found (/build/gkl-0.8.6+dfsg/settings.gradle) | |
| Root project name not defined in settings.gradle, defaulting to 'gkl' instead of the name of the root directory 'gkl-0.8.6+dfsg' | |
| Projects loaded. Root project using build file '/build/gkl-0.8.6+dfsg/build.gradle'. | |
| Included projects: [root project 'gkl'] | |
| Keep-alive timer started | |
| Adding Debian repository to project 'gkl' | |
| Parallel execution is an incubating feature. | |
| Evaluating root project 'gkl' using build file '/build/gkl-0.8.6+dfsg/build.gradle'. | |
| Compiling build file '/build/gkl-0.8.6+dfsg/build.gradle' using SubsetScriptTransformer. | |
| Compiling build file '/build/gkl-0.8.6+dfsg/build.gradle' using BuildScriptTransformer. | |
| Starting process 'command 'dpkg-parsechangelog''. Working directory: /build/gkl-0.8.6+dfsg Command: dpkg-parsechangelog -S Version | |
| Successfully started process 'command 'dpkg-parsechangelog'' | |
| Adding Maven pom generation to project 'gkl' | |
| Linking the generated javadoc to the system JDK API documentation | |
| All projects evaluated. | |
| Selected primary task 'jar' from project : | |
| Creating new cache for annotation-processors, path /build/gkl-0.8.6+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@647c787e | |
| Tasks to be executed: [task ':compileJava', task ':cmakeConfig', task ':cmakeBuild', task ':copyNativeLib', task ':buildOnMac', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar'] | |
| Creating new cache for resourceHashesCache, path /build/gkl-0.8.6+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@3b4d4b34 | |
| Creating new cache for taskHistory, path /build/gkl-0.8.6+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@77c1054 | |
| Creating new cache for outputFiles, path /build/gkl-0.8.6+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@181fb64 | |
| :compileJava (Thread[Task worker for ':' Thread 3,5,main]) started. | |
| :compileJava | |
| Putting task artifact state for task ':compileJava' into context took 0.099 secs. | |
| Creating new cache for metadata-2.36/module-metadata, path /build/gkl-0.8.6+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@5e480f6f | |
| Loading the Maven rules... | |
| Replacing commons-io:commons-io:jar:2.4 -> commons-io:commons-io:jar:debian | |
| Passing through org.apache.commons:commons-parent:jar:debian | |
| Passing through org.apache:apache:jar:debian | |
| Passing through org.broadinstitute:gatk-native-bindings:jar:debian | |
| Replacing org.apache.logging.log4j:log4j-api:jar:2.5 -> org.apache.logging.log4j:log4j-api:jar:debian | |
| Passing through org.apache.logging.log4j:log4j:jar:debian | |
| Replacing org.apache.logging.log4j:log4j-core:jar:2.5 -> org.apache.logging.log4j:log4j-core:jar:debian | |
| Replacing com.github.samtools:htsjdk:jar:2.9.0 -> com.github.samtools:htsjdk:jar:debian | |
| Passing through org.apache.commons:commons-jexl:jar:debian | |
| Passing through commons-logging:commons-logging:jar:debian | |
| Passing through org.xerial.snappy:snappy-java:jar:debian | |
| Passing through org.apache.commons:commons-compress:jar:debian | |
| Passing through org.tukaani:xz:jar:debian | |
| Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian | |
| Up-to-date check for task ':compileJava' took 6.865 secs. It is not up-to-date because: | |
| No history is available. | |
| All input files are considered out-of-date for incremental task ':compileJava'. | |
| Compiling with JDK Java compiler API. | |
| :compileJava (Thread[Task worker for ':' Thread 3,5,main]) completed. Took 15.814 secs. | |
| :cmakeConfig (Thread[Task worker for ':' Thread 3,5,main]) started. | |
| :cmakeConfig | |
| Putting task artifact state for task ':cmakeConfig' into context took 0.0 secs. | |
| Up-to-date check for task ':cmakeConfig' took 0.458 secs. It is not up-to-date because: | |
| No history is available. | |
| Starting process 'command 'cmake''. Working directory: /build/gkl-0.8.6+dfsg/build/native Command: cmake -Wno-dev /build/gkl-0.8.6+dfsg | |
| Successfully started process 'command 'cmake'' | |
| :cmakeConfig (Thread[Task worker for ':' Thread 3,5,main]) completed. Took 13.451 secs. | |
| :cmakeBuild (Thread[Task worker for ':' Thread 3,5,main]) started. | |
| :cmakeBuild | |
| Putting task artifact state for task ':cmakeBuild' into context took 0.089 secs. | |
| Up-to-date check for task ':cmakeBuild' took 0.002 secs. It is not up-to-date because: | |
| Task.upToDateWhen is false. | |
| Starting process 'command 'make''. Working directory: /build/gkl-0.8.6+dfsg/build/native Command: make install | |
| Successfully started process 'command 'make'' | |
| /build/gkl-0.8.6+dfsg/build/native/src/main/native/compression/otc_zlibExternal-prefix/src/otc_zlibExternal/deflate.c: In function 'deflate': | |
| /build/gkl-0.8.6+dfsg/build/native/src/main/native/compression/otc_zlibExternal-prefix/src/otc_zlibExternal/deflate.c:995:36: error: 'x86_cpu_has_sse42' undeclared (first use in this function) | |
| 995 | else if (s->level == 1 && !x86_cpu_has_sse42) | |
| | ^~~~~~~~~~~~~~~~~ | |
| /build/gkl-0.8.6+dfsg/build/native/src/main/native/compression/otc_zlibExternal-prefix/src/otc_zlibExternal/deflate.c:995:36: note: each undeclared identifier is reported only once for each function it appears in | |
| make[5]: *** [Makefile:197: deflate.o] Error 1 | |
| make[4]: *** [src/main/native/compression/CMakeFiles/otc_zlibExternal.dir/build.make:132: src/main/native/compression/otc_zlibExternal-prefix/src/otc_zlibExternal-stamp/otc_zlibExternal-build] Error 2 | |
| make[3]: *** [CMakeFiles/Makefile2:241: src/main/native/compression/CMakeFiles/otc_zlibExternal.dir/all] Error 2 | |
| make[2]: *** [Makefile:149: all] Error 2 | |
| :cmakeBuild FAILED | |
| :cmakeBuild (Thread[Task worker for ':' Thread 3,5,main]) completed. Took 20.207 secs. | |
| FAILURE: Build failed with an exception. | |
| * What went wrong: | |
| Execution failed for task ':cmakeBuild'. | |
| > Process 'command 'make'' finished with non-zero exit value 2 | |
| * Try: | |
| Run with --debug option to get more log output. Run with --scan to get full insights. | |
| * Exception is: | |
| org.gradle.api.tasks.TaskExecutionException: Execution failed for task ':cmakeBuild'. | |
| at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:100) | |
| at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.execute(ExecuteActionsTaskExecuter.java:70) | |
| at org.gradle.api.internal.tasks.execution.OutputDirectoryCreatingTaskExecuter.execute(OutputDirectoryCreatingTaskExecuter.java:51) | |
| at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:62) | |
| at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) | |
| at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) | |
| at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) | |
| at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) | |
| at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) | |
| at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) | |
| at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) | |
| at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) | |
| at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) | |
| at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) | |
| at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) | |
| at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) | |
| at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) | |
| at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) | |
| at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) | |
| at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) | |
| at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) | |
| at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) | |
| at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) | |
| at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) | |
| at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) | |
| Caused by: org.gradle.process.internal.ExecException: Process 'command 'make'' finished with non-zero exit value 2 | |
| at org.gradle.process.internal.DefaultExecHandle$ExecResultImpl.assertNormalExitValue(DefaultExecHandle.java:382) | |
| at org.gradle.process.internal.DefaultExecAction.execute(DefaultExecAction.java:31) | |
| at org.gradle.api.tasks.AbstractExecTask.exec(AbstractExecTask.java:54) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) | |
| at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) | |
| at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) | |
| at org.gradle.internal.reflect.JavaMethod.invoke(JavaMethod.java:73) | |
| at org.gradle.api.internal.project.taskfactory.StandardTaskAction.doExecute(StandardTaskAction.java:46) | |
| at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:39) | |
| at org.gradle.api.internal.project.taskfactory.StandardTaskAction.execute(StandardTaskAction.java:26) | |
| at org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:780) | |
| at org.gradle.api.internal.AbstractTask$TaskActionWrapper.execute(AbstractTask.java:747) | |
| at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter$1.run(ExecuteActionsTaskExecuter.java:121) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) | |
| at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) | |
| at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeAction(ExecuteActionsTaskExecuter.java:110) | |
| at org.gradle.api.internal.tasks.execution.ExecuteActionsTaskExecuter.executeActions(ExecuteActionsTaskExecuter.java:92) | |
| ... 29 more | |
| * Get more help at https://help.gradle.org | |
| BUILD FAILED in 1m 24s | |
| 3 actionable tasks: 3 executed | |
| dh_auto_build: error: gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=gkl -Dfile.encoding=UTF-8 --parallel --max-workers=8 jar returned exit code 1 | |
| make[1]: *** [debian/rules:15: override_dh_auto_build] Error 25 | |
| make[1]: Leaving directory '/build/gkl-0.8.6+dfsg' | |
| make: *** [debian/rules:12: build] Error 2 | |
| dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 | |
| [0mI: copying local configuration[0m | |
| [0;31mE: Failed autobuilding of package[0m | |
| [0mI: user script /var/cache/pbuilder/build/cow.2145780/tmp/hooks/C10shell starting[0m | |
| Reading package lists... | |
| Building dependency tree... | |
| Reading state information... | |
| The following additional packages will be installed: | |
| libcanberra0 libgpm2 libltdl7 libogg0 libtdb1 libvorbis0a libvorbisfile3 | |
| sound-theme-freedesktop vim-runtime | |
| Suggested packages: | |
| libcanberra-gtk0 libcanberra-pulse gpm ctags vim-doc vim-scripts | |
| The following NEW packages will be installed: | |
| less libcanberra0 libgpm2 libltdl7 libogg0 libtdb1 libvorbis0a | |
| libvorbisfile3 sound-theme-freedesktop vim vim-runtime | |
| 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. | |
| Need to get 8254 kB/8662 kB of archives. | |
| After this operation, 37.8 MB of additional disk space will be used. | |
| Get:1 http://deb.debian.org/debian sid/main arm64 less arm64 551-2 [129 kB] | |
| Get:2 http://deb.debian.org/debian sid/main arm64 libtdb1 arm64 1.4.3-1 [48.3 kB] | |
| Get:3 http://deb.debian.org/debian sid/main arm64 libvorbis0a arm64 1.3.7-1 [86.2 kB] | |
| Get:4 http://deb.debian.org/debian sid/main arm64 libvorbisfile3 arm64 1.3.7-1 [25.4 kB] | |
| Get:5 http://deb.debian.org/debian sid/main arm64 sound-theme-freedesktop all 0.8-2 [384 kB] | |
| Get:6 http://deb.debian.org/debian sid/main arm64 libcanberra0 arm64 0.30-7 [37.3 kB] | |
| Get:7 http://deb.debian.org/debian sid/main arm64 libgpm2 arm64 1.20.7-6 [35.4 kB] | |
| Get:8 http://deb.debian.org/debian sid/main arm64 vim-runtime all 2:8.2.1913-1 [6151 kB] | |
| Get:9 http://deb.debian.org/debian sid/main arm64 vim arm64 2:8.2.1913-1+b1 [1357 kB] | |
| debconf: delaying package configuration, since apt-utils is not installed | |
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| Preparing to unpack .../00-less_551-2_arm64.deb ... | |
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