project.yml

---
project:
  type: Genomic
  fields:
    - label: Title
      type: text
      required: true
  entities:
    - type: material
      id: specimen
      label: Specimen
      fields:
      refs:

    - type: process
      id: sequencing
      label: Sequencing
      refs:
        - type: input
          entity: material:specimen
        - type: output
          entity: data:fastq_file

    - type: process
      id: alignment
      label: Alignment
      refs:
        - type: input
          entity: data:fastq_file
        - type: output
          entity: data:bam_file

    - type: process
      label: Analysis
      refs:
        - type: input
          entity: data:bam_file
        - type: output
          entity: data:foo_file

    - type: data
      id: fastq_file

    - type: data
      id: bam_file

    - type: data
      id: foo_file