Scale back or transform back multiple linear regression coefficients: Arbitrary case with ridge regression
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# (c) Copyright 2008-2015 Mehmet Suzen (suzen at acm dot org) | |
# Creative Commons Licence | |
# This work is licensed under a Creative Commons Attribution 3.0 Unported License. | |
# | |
rm(list=ls()) | |
library(glmnet) | |
library(R1magic) # https://github.com/msuzen/R1magic | |
set.seed(4242) | |
n <- 100 # observations | |
X <- model.matrix(~., data.frame(x1 = rnorm(n, 1, 1), | |
x2 = rnorm(n, 2, 2), | |
x3 = rnorm(n, 3,2), | |
x4 = rnorm(n, 4,2), | |
x5 = rnorm(n, 5,1), | |
x6 = rnorm(n, 6,1) | |
))[,-1] # glmnet adds the intercept | |
Y <- matrix(rnorm(n, 1, 2),n,1) | |
# Now apply scaling | |
X.s <- scale(X) | |
Y.s <- scale(Y) | |
# Ridge regression & coefficients with scaled data | |
glm.fit.s <- glmnet(X.s, Y.s, alpha=0) | |
betas.scaled <- as.matrix(as.vector(coef(glm.fit.s)[,80]), 1, 7) | |
# trasform the coefficients | |
betas.transformed <- scaleBack.lm(X, Y, betas.scaled) | |
# Now verify the correctness of scaled coefficients: | |
# ridge regression & coefficients | |
glm.fit <- glmnet(X, Y, alpha=0) | |
betas.fit <- as.matrix(as.vector(coef(glm.fit)[,80]), 1, 7) | |
# Verify correctness: Difference is smaller than 1e-12 | |
sum(betas.fit-betas.transformed) < 1e-12 # TRUE |
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