Created
April 14, 2012 23:10
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Install of Dendropy with test run of modified BPA using geodispersal-analysis.py
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| #!/bin/sh | |
| set -x | |
| wget http://pypi.python.org/packages/source/D/DendroPy/DendroPy-3.11.0.tar.gz | |
| tar xfvz DendroPy-3.11.0.tar.gz | |
| cd DendroPy-3.11.0 | |
| python setup.py install | |
| cd extras/geodispersal/ | |
| python geodispersal-analysis.py LiebermanEBasidechenella.nex LiebermanEBasidechenella.nex --labels=labels.txt --paup --vicariance=vic --dispersal=disp | |
| cat Readme.txt |
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