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mw55309/diamond_blastp

Created May 25, 2020 12:16
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diamond_blastp
query:
>contig_1648_86 # 93536 # 94054 # 1 # ID=21_86;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.696
MMTLLHLISAVALLVWGTHIVRTGVLRVYGARLRRWLGGRLNRPLAFAAGTGVTALVQSS
NATALLASGFVADRLMPLATATREVLRMGDIVEGMLAAILEALRNERAGSARDLGDQDDE
LDELYTGIKLYLELIGDMKRLNSLFCAVAFSTVEEEDGDGPGLSTLSRRSRP*
subject:
>tr|A0A2E9RF79|A0A2E9RF79_9GAMM PhoU domain-containing protein OS=Alcanivorax sp. OX=1872427 GN=CL543_00625 PE=4 SV=1
MMTLLHLXSAVALLVWGTHIVRTGVLRVYGARLRRWLGGRLNRPLAFAAGTGVTALVQSS
NATALLASGFVADRLMPLATALAILLGADLGTALMARVLTLDLSWLWPLLVIAGVPLFLS
RKQSRAGQLGRVALGLGLILLALALIIDAMAPITEARGVRVMFESLTGDLMLDALVGALF
AMLTWSSLAAVLLTATLAAAGVLPLPVALALVVGANVGSGLLALINTSLHNTAGRRVALG
NLLFKLLGLALVLPAVPWLADWLATLPFDDQDRVIGFHVAYNGARCLLMLPFTGPMARLA
TRLMPDHGGADDTPRPRHLDPAALDRPPLALANATREVLRMGDIVEGMLAAILEALRNER
AGSARDLGDQDDELDELYTGIKLYLARVSREQLSDPDQRRWSQVMEMSINLEQAGDQIEH
MMEKVRDRKTARRRSFSDSGLQELTDLHGRLHDNLRLGLSVFLSGDPESARQLLIEKDRF
RDRQRQLSHAHLERLHRRVVQSIETSSLHLELIGDMKRLNSLFCAVAFSTVEEEDGDGPG
LSTLSRRSRP
Results:
>A0A2E9RF79_9GAMM PhoU domain-containing protein OS=Alcanivorax sp. OX=1872427 GN=CL543_00625 PE=4 SV=1
Length=550
Score = 170.6 bits (431), Expect = 4.1e-47
Identities = 171/550 (31%), Positives = 171/550 (31%), Gaps = 378/550 (68%)
Query 1 MMTLLHLISAVALLVWGTHIVRTGVLRVYGARLRRWLGGRLNRPLAFAAGTGVTALVQSS
MMTLLHL SAVALLVWGTHIVRTGVLRVYGARLRRWLGGRLNRPLAFAAGTGVTALVQSS
Sbjct 1 MMTLLHLXSAVALLVWGTHIVRTGVLRVYGARLRRWLGGRLNRPLAFAAGTGVTALVQSS
Query 61 NATALLASGFVADRLMPLAT----------------------------------------
NATALLASGFVADRLMPLAT
Sbjct 61 NATALLASGFVADRLMPLATALAILLGADLGTALMARVLTLDLSWLWPLLVIAGVPLFLS
Query 81 ------------------------------------------------------------
Sbjct 121 RKQSRAGQLGRVALGXXXXXXXXXXXXXXXXXXXXXRGVRVMFESLTGDLMLDALVGALF
Query 81 ------------------------------------------------------------
Sbjct 181 AMLTWSSLAAVLLTATLAAAGVLPLPVALALVVGANVGSGLLALINTSLHNTAGRRVALG
Query 81 ------------------------------------------------------------
Sbjct 241 NLLFKLLGLALVLPAVPWLADWLATLPFDDQDRVIGFHVAYNGARCLLMLPFTGPMARLA
Query 81 ---------------------------------ATREVLRMGDIVEGMLAAILEALRNER
ATREVLRMGDIVEGMLAAILEALRNER
Sbjct 301 TRLMPDHGGADDTPRPRHLDPAALDRPPLALANATREVLRMGDIVEGMLAAILEALRNER
Query 108 AGSARDLGDQDDELDELYTGIKLY------------------------------------
AGSARDLGDQDDELDELYTGIKLY
Sbjct 361 AGSARDLGDQDDELDELYTGIKLYLARVSREQLSDPDQRRWSQVMEMSINLEQAGDQIEH
Query 132 ------------------------------------------------------------
Sbjct 421 MMEKVRDRKTARRRSFSDSGLQELTDLHGRLHDNLRLGLSVFLSGDPESARQLLIEKDRF
Query 132 -----------------------------LELIGDMKRLNSLFCAVAFSTVEEEDGDGPG
LELIGDMKRLNSLFCAVAFSTVEEEDGDGPG
Sbjct 481 RDRQRQLSHAHLERLHRRVVQSIETSSLHLELIGDMKRLNSLFCAVAFSTVEEEDGDGPG
Query 163 LSTLSRRSRP
LSTLSRRSRP
Sbjct 541 LSTLSRRSRP
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