mweiden

Keybase proof

I hereby claim:

• I am mweiden on github.
• I am weiden (https://keybase.io/weiden) on keybase.
• I have a public key whose fingerprint is E263 B46A A365 146E A3ED 3812 7DA4 A171 B407 E270

To claim this, I am signing this object:

mweiden

Blocked Issues

2020-03-02

Issue #18 Code a minimal front end for the list-of-projects page (In Progress)

• Issue #16 Design of the list-of-projects page (In Progress)
  • PR #160 Design for issue #16: Design the list-of-projects page

Issue #20 Code a minimal front end for the project page (In Progress)

• Issue #19 Design the project page (In Progress)

mweiden

FROM ubuntu:bionic

RUN apt-get update -y
RUN apt-get install -y bash git curl wget vim
RUN apt-get install -y build-essential
RUN apt-get install -y bison flex libelf-dev lsb-release
RUN apt-get install -y linux-headers-generic

# https://github.com/iovisor/bcc/blob/master/INSTALL.md#ubuntu---binary
ENV CONFIG_BPF=y

mweiden

#!/usr/bin/env python3

"""
requires python 3.7
"""

import argparse
import re
import sys
import datetime

mweiden

HCA Data Coordination Platform: Build Status

System	Stage	Status
DCP	integration
DCP	staging
Upload	dev
Upload	integration
Upload	staging
Data Storage	dev
Data Storage	integration

mweiden

Production checklist

Design

• System blueprint (boxes and arrows)
• Capacity planning

Administrative

mweiden

[System Name]: Run Book / System Operation Manual

Service or system overview

README.md link:

Service owner

mweiden

iters = [iter(t) for t in [(1, 2), (0, 2), (0, 2, 3)]]


def get(itr):
    try:
        return next(itr)
    except StopIteration:
        return None

mweiden

function return_value() {
	RETVAL=$?
	[ $RETVAL -ne 0 ] && echo "\[\e[31m\]${RETVAL}\[\e[m\]" || echo "\[\e[32m\]${RETVAL}\[\e[m\]"
}

export PS1="`return_value` \[\e[34m\]\W\[\e[m\]> "

mweiden

Direct links for DCP data

The command below takes a set of bundle UUIDs, fetches direct s3 urls for the files of each and writes it to a CSV file.

tail -n +2 melanoma_bundle_uuids.txt | ./gen_direct_url.sh > direct_urls.csv

The format of the CSV is bundle_uuid, file_name, file_url.

Prerequisites