Created
December 11, 2022 19:32
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Line 17 (match 829) seems to be the one that causes Bio.SearchIO.BlatIO to be unable to parse the file.
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| psLayout version 3 | |
| match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts | |
| match match count bases count bases name size start end name size start end count | |
| --------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| 1034 214 0 0 6 -127 23 316 + XP_049281413.1 1152 31 1152 XP_035914594.1 1593 29 1593 26 47,95,21,95,77,35,3,27,44,76,35,31,45,41,24,42,105,57,58,38,33,71,24,48,22,54, 31,84,181,202,297,302,337,340,375,419,495,530,561,606,647,671,713,818,875,861,899,932,1003,1027,1075,1098, 29,81,176,231,355,379,462,470,497,613,699,739,775,825,876,905,952,1191,1258,1263,1306,1349,1430,1459,1515,1539, | |
| 841 148 0 0 5 -93 19 268 + XP_049281413.1 1152 181 1077 XP_035914594.1 1593 219 1476 23 18,53,74,27,25,76,35,28,24,41,35,31,87,25,23,48,39,46,76,38,52,71,17, 181,199,266,340,375,400,476,511,544,568,609,644,675,684,709,732,780,777,823,899,937,989,1060, 219,247,300,379,406,465,551,591,619,648,699,739,775,875,905,952,1067,1131,1182,1263,1306,1373,1459, | |
| 817 149 0 0 2 -97 18 316 + XP_049281413.1 1152 208 1077 XP_035914594.1 1593 170 1452 20 37,30,92,25,24,71,35,98,35,31,45,41,24,52,100,48,57,33,73,15, 208,245,275,375,400,424,495,530,628,663,694,739,780,804,856,956,899,956,989,1062, 170,212,247,339,393,470,551,591,699,739,775,825,876,905,1134,1263,1244,1306,1354,1437, | |
| 805 168 0 0 1 -91 19 279 + XP_049281413.1 1152 195 1077 XP_035914594.1 1593 176 1428 20 45,62,73,30,33,76,35,98,35,31,47,44,19,42,91,33,86,24,54,15, 195,240,302,375,405,438,514,549,647,682,713,760,804,823,865,956,989,984,1008,1062, 176,231,298,387,422,465,551,591,699,739,775,832,881,905,952,1158,1201,1258,1354,1413, | |
| 857 198 0 0 5 -183 16 173 + XP_049281413.1 1152 181 1053 XP_035914594.1 1593 281 1509 20 12,73,36,24,32,63,100,53,31,45,60,47,105,58,52,91,33,81,28,31, 181,193,266,302,340,375,438,538,511,542,587,647,694,799,728,780,880,913,994,1022, 281,303,381,422,446,478,575,680,739,775,825,900,952,1067,1096,1215,1306,1349,1440,1478, | |
| 745 123 0 0 2 28 18 308 + XP_049281413.1 1152 181 1077 XP_035914594.1 1593 324 1500 21 40,19,74,37,24,22,41,35,31,39,52,24,42,34,87,51,76,52,38,33,17, 181,221,240,314,351,375,397,438,473,504,557,609,633,675,709,796,861,937,989,1027,1060, 324,436,465,549,591,621,648,699,739,775,814,876,905,952,991,1131,1182,1263,1392,1435,1483, | |
| 722 155 0 0 2 17 15 330 + XP_049281413.1 1152 181 1075 XP_035914594.1 1593 195 1402 18 12,38,95,32,11,90,100,33,28,45,60,57,39,34,46,85,19,53, 181,193,245,340,375,386,476,576,609,637,682,742,799,838,872,918,1003,1022, 195,260,298,422,454,470,575,680,723,775,825,900,1043,1092,1131,1182,1320,1349, | |
| 738 153 0 0 2 -30 17 264 + XP_049281413.1 1152 181 1042 XP_035914594.1 1593 338 1493 19 21,43,33,76,21,3,84,30,31,46,40,47,105,43,72,57,81,24,34, 181,202,245,278,354,375,378,462,492,523,569,609,656,761,804,818,875,956,1008, 338,374,422,465,551,578,591,704,739,775,850,900,952,1191,1263,1282,1349,1435,1459, | |
| 712 116 0 0 2 22 17 411 + XP_049281413.1 1152 227 1077 XP_035914594.1 1593 170 1409 20 51,62,27,49,43,33,76,35,65,30,31,26,41,24,42,34,38,52,52,17, 227,278,340,375,424,481,514,590,625,690,720,751,777,818,842,884,918,956,1008,1060, 170,231,298,325,379,422,465,551,591,704,739,775,825,876,905,952,1139,1182,1263,1392, | |
| 732 146 0 0 3 -55 15 267 + XP_049281413.1 1152 181 1004 XP_035914594.1 1593 362 1507 18 12,38,66,75,22,19,41,24,23,105,58,33,133,48,33,81,19,48, 181,193,231,297,375,397,416,457,481,504,609,595,628,761,823,856,937,956, 362,384,475,613,688,739,825,876,905,952,1067,1072,1115,1258,1306,1349,1435,1459, | |
| 783 172 0 0 3 -125 17 197 + XP_049281413.1 1152 247 1077 XP_035914594.1 1593 171 1323 18 50,76,30,82,13,33,76,35,84,33,47,45,61,40,119,81,35,15, 247,297,375,405,487,500,533,609,644,728,761,808,853,835,875,994,1027,1062, 171,231,263,298,399,422,465,551,591,680,723,775,825,874,924,1187,1263,1308, | |
| 829 223 0 0 4 -167 15 270 + XP_049281413.1 1152 188 1072 XP_035914594.1 1593 188 1509 18 33,133,22,61,41,100,19,32,68,71,28,34,76,30,103,79,90,31, 188,221,354,314,378,419,519,538,570,652,723,751,785,861,891,994,951,1041, 188,231,374,463,524,575,680,704,746,814,900,952,991,1072,1131,1244,1349,1478, | |
| 639 150 0 0 2 17 14 291 + XP_049281413.1 1152 181 987 XP_035914594.1 1593 429 1509 17 21,62,30,78,44,47,34,33,47,104,20,34,47,33,81,24,50, 181,202,264,294,375,419,466,500,533,580,684,704,738,785,818,899,937, 429,465,532,591,669,723,775,857,900,952,1061,1148,1230,1306,1349,1435,1459, | |
| 708 147 0 0 1 3 14 392 + XP_049281413.1 1152 181 1039 XP_035914594.1 1593 262 1509 16 21,24,71,75,25,85,45,60,47,34,47,81,62,38,90,50, 181,202,226,297,375,400,485,530,590,637,671,718,799,861,899,989, 262,350,379,465,540,575,775,825,900,952,991,1129,1239,1306,1354,1459, | |
| 678 126 0 0 1 8 14 397 + XP_049281413.1 1152 265 1077 XP_035914594.1 1593 170 1371 16 49,53,82,43,90,114,35,31,45,41,24,42,34,63,51,7, 265,314,375,457,500,590,704,739,770,815,856,880,922,956,1019,1070, 170,229,282,374,470,575,699,739,775,825,876,905,952,991,1131,1364, | |
| 711 146 0 0 2 -83 16 253 + XP_049281413.1 1152 303 1077 XP_035914594.1 1593 170 1280 18 69,3,117,43,33,76,35,98,35,31,45,41,47,24,70,33,35,22, 303,375,378,495,538,571,647,682,780,815,846,891,932,979,1003,987,1020,1055, 170,239,247,374,422,465,551,591,699,739,775,825,900,952,1043,1094,1194,1258, | |
| 1024 196 0 0 6 -99 25 311 + XP_049281413.1 1152 31 1152 XP_035914595.1 1560 29 1560 28 47,95,21,95,77,38,32,11,68,27,19,30,31,45,41,24,23,91,34,76,5,38,33,71,24,48,22,54, 31,84,181,202,297,302,340,375,386,454,481,500,530,561,606,647,671,694,785,780,856,861,899,932,1003,1027,1075,1098, 29,81,176,231,355,379,422,454,470,658,690,714,749,785,835,886,915,962,1082,1101,1220,1230,1273,1316,1397,1426,1482,1506, | |
| 742 119 0 0 1 8 19 388 + XP_049281413.1 1152 208 1077 XP_035914595.1 1560 170 1419 21 37,30,92,25,24,71,35,41,57,35,31,45,41,24,52,19,43,38,33,73,15, 208,245,275,375,400,424,495,530,571,628,663,694,739,780,804,856,875,918,956,989,1062, 170,212,247,339,393,470,551,591,642,709,749,785,835,886,915,1072,1101,1230,1273,1321,1404, | |
| 800 152 0 0 3 -56 19 296 + XP_049281413.1 1152 181 1077 XP_035914595.1 1560 219 1467 22 18,53,74,27,25,76,35,27,30,41,35,31,87,25,71,55,44,20,38,52,71,17, 181,199,266,340,375,400,476,511,538,568,609,644,675,684,709,780,835,879,899,937,989,1060, 219,247,300,379,406,465,551,591,623,658,709,749,785,885,915,1034,1099,1167,1230,1273,1340,1450, | |
| 785 136 0 0 3 -60 18 215 + XP_049281413.1 1152 181 1042 XP_035914595.1 1560 324 1460 21 40,19,74,37,21,41,41,35,31,45,41,24,42,34,38,128,58,33,81,24,34, 181,221,240,314,351,375,416,457,492,523,568,609,633,675,709,747,875,842,875,956,1008, 324,436,465,549,591,612,658,709,749,785,835,886,915,962,1001,1087,1225,1273,1316,1402,1426, | |
| 730 138 0 0 1 14 19 351 + XP_049281413.1 1152 195 1077 XP_035914595.1 1560 176 1395 21 45,62,73,35,33,76,35,41,43,30,31,47,44,19,42,91,14,14,24,54,15, 195,240,302,375,424,457,533,568,609,652,682,713,760,804,823,865,956,970,984,1008,1062, 176,231,298,387,422,465,551,591,642,714,749,785,842,891,915,962,1077,1182,1225,1321,1380, | |
| 724 139 0 0 1 9 18 418 + XP_049281413.1 1152 181 1053 XP_035914595.1 1560 195 1476 20 12,33,52,76,21,3,41,57,35,31,34,33,47,105,57,43,29,95,28,31, 181,193,226,278,354,375,378,419,476,511,542,576,609,656,761,818,861,899,994,1022, 195,260,379,465,551,578,591,642,709,749,785,867,910,962,1158,1225,1273,1302,1407,1445, | |
| 760 135 0 0 3 -45 18 311 + XP_049281413.1 1152 227 1077 XP_035914595.1 1560 170 1376 21 51,62,27,49,43,33,62,33,54,41,35,31,45,41,24,42,81,39,33,52,17, 227,278,340,375,424,481,514,576,609,663,704,739,770,815,856,880,922,1003,975,1008,1060, 170,231,298,325,379,422,465,532,575,658,709,749,785,835,886,915,962,1053,1168,1230,1359, | |
| 743 143 0 0 1 8 18 202 + XP_049281413.1 1152 181 1075 XP_035914595.1 1560 281 1369 20 12,73,36,33,32,44,43,30,27,30,31,47,57,48,34,90,43,90,33,53, 181,193,266,302,335,375,419,462,492,519,549,580,627,684,732,766,856,899,989,1022, 281,303,381,422,465,497,575,623,658,690,749,785,842,909,962,1001,1101,1149,1273,1316, | |
| 727 176 0 0 2 -16 15 364 + XP_049281413.1 1152 188 1075 XP_035914595.1 1560 188 1455 17 33,133,22,61,36,43,30,60,47,46,40,47,105,57,57,57,29, 188,221,354,314,421,457,500,530,590,637,683,723,770,875,932,989,1046, 188,231,374,463,524,575,623,658,733,785,860,910,962,1158,1225,1359,1426, | |
| 697 144 0 0 2 17 14 297 + XP_049281413.1 1152 181 1039 XP_035914595.1 1560 338 1476 17 12,38,66,75,22,41,35,12,45,41,57,56,115,76,10,90,50, 181,193,231,297,375,397,438,473,485,530,571,628,684,799,875,899,989, 338,384,475,556,631,658,709,749,785,835,886,1034,1100,1225,1311,1321,1426, | |
| 741 136 0 0 1 -47 21 199 + XP_049281413.1 1152 247 1077 XP_035914595.1 1560 171 1247 22 50,76,2,30,38,33,95,57,43,19,30,31,26,41,24,42,34,76,14,52,42,22, 247,297,373,375,405,443,476,571,628,671,690,720,751,777,818,842,884,918,994,1008,1013,1055, 171,231,317,320,379,422,465,575,642,690,714,749,785,835,886,915,962,1001,1087,1106,1154,1225, | |
| 705 172 0 0 2 17 15 311 + XP_049281413.1 1152 181 1075 XP_035914595.1 1560 262 1450 18 12,85,24,70,25,57,43,19,24,57,52,38,114,38,62,33,71,53, 181,193,278,302,375,400,457,500,519,557,614,666,704,818,856,918,951,1022, 262,279,374,470,540,575,642,690,714,738,824,886,953,1120,1201,1273,1316,1397, | |
| 766 151 0 0 4 -105 17 203 + XP_049281413.1 1152 265 1077 XP_035914595.1 1560 170 1290 20 49,53,82,48,19,19,90,43,30,27,30,31,45,61,31,85,43,81,35,15, 265,314,375,457,519,538,557,647,690,720,747,777,808,853,835,866,951,994,1027,1062, 170,229,282,374,422,446,470,575,623,658,690,749,785,835,884,1006,1101,1154,1230,1275, | |
| 668 138 0 0 2 17 14 239 + XP_049281413.1 1152 181 1004 XP_035914595.1 1560 429 1474 17 21,62,30,41,40,41,47,34,33,47,104,77,43,31,83,24,48, 181,202,264,294,335,378,419,466,500,533,580,684,761,804,835,918,956, 429,465,532,591,642,682,733,785,867,910,962,1138,1225,1273,1314,1402,1426, | |
| 705 137 0 0 4 -36 15 181 + XP_049281413.1 1152 181 987 XP_035914595.1 1560 453 1476 19 12,63,38,41,28,4,41,41,24,23,105,58,19,109,43,33,86,24,50, 181,193,256,294,335,363,375,416,457,481,504,609,595,614,723,766,799,899,937, 453,475,591,658,709,785,789,835,886,915,962,1077,1082,1106,1225,1273,1316,1402,1426, | |
| 651 120 0 0 1 3 14 258 + XP_049281413.1 1152 303 1077 XP_035914595.1 1560 170 1199 16 69,3,117,43,33,76,35,41,57,35,31,45,60,47,29,50, 303,375,378,495,538,571,647,682,723,780,815,846,891,951,998,1027, 170,239,247,374,422,465,551,591,642,709,749,785,835,910,1115,1149, | |
| 997 184 0 0 5 -60 24 326 + XP_049281413.1 1152 31 1152 XP_035914596.1 1536 29 1536 27 47,95,21,95,77,38,32,11,68,27,19,30,31,45,41,24,42,34,109,5,38,33,71,24,48,22,54, 31,84,181,202,297,302,340,375,386,454,481,500,530,561,606,647,671,713,747,856,861,899,932,1003,1027,1075,1098, 29,81,176,231,355,379,422,454,470,658,690,714,749,785,835,886,915,962,1001,1196,1206,1249,1292,1373,1402,1458,1482, | |
| 737 124 0 0 1 8 19 364 + XP_049281413.1 1152 208 1077 XP_035914596.1 1536 170 1395 21 37,30,92,25,24,71,35,41,57,35,31,45,41,24,52,10,33,57,33,73,15, 208,245,275,375,400,424,495,530,571,628,663,694,739,780,804,856,866,899,956,989,1062, 170,212,247,339,393,470,551,591,642,709,749,785,835,886,915,1072,1130,1187,1249,1297,1380, | |
| 828 168 0 0 5 -124 18 237 + XP_049281413.1 1152 181 1053 XP_035914596.1 1536 219 1452 22 18,53,74,27,25,76,35,27,30,41,35,31,87,25,23,48,77,91,33,81,28,31, 181,199,266,340,375,400,476,511,538,568,609,644,675,684,709,732,780,780,880,913,994,1022, 219,247,300,379,406,465,551,591,623,658,709,749,785,885,915,962,1077,1158,1249,1292,1383,1421, | |
| 743 136 0 0 2 17 18 216 + XP_049281413.1 1152 181 1077 XP_035914596.1 1536 324 1419 21 40,19,74,37,21,41,41,35,31,45,41,24,42,39,90,10,71,38,52,71,17, 181,221,240,314,351,375,416,457,492,523,568,609,633,675,728,818,828,899,937,989,1060, 324,436,465,549,591,612,658,709,749,785,835,886,915,962,1001,1101,1130,1206,1249,1316,1402, | |
| 733 135 0 0 1 14 18 327 + XP_049281413.1 1152 195 1077 XP_035914596.1 1536 176 1371 20 45,62,73,35,33,76,35,41,43,30,31,47,44,19,42,91,38,14,54,15, 195,240,302,375,424,457,533,568,609,652,682,713,760,804,823,865,956,994,1008,1062, 176,231,298,387,422,465,551,591,642,714,749,785,842,891,915,962,1125,1211,1297,1356, | |
| 734 143 0 0 2 17 16 187 + XP_049281413.1 1152 181 1075 XP_035914596.1 1536 281 1345 19 12,73,36,24,32,82,43,30,60,47,45,60,47,34,38,38,90,33,53, 181,193,266,302,340,375,457,500,530,590,637,682,742,789,823,861,899,989,1022, 281,303,381,422,446,478,575,623,658,733,785,835,910,962,1001,1082,1125,1249,1292, | |
| 751 124 0 0 3 -25 18 178 + XP_049281413.1 1152 227 1077 XP_035914596.1 1536 170 1223 21 51,62,27,49,43,33,62,33,54,41,35,31,45,41,24,42,34,52,52,42,22, 227,278,340,375,424,481,514,576,609,663,704,739,770,815,856,880,922,956,1008,1013,1055, 170,231,298,325,379,422,465,532,575,658,709,749,785,835,886,915,962,1001,1082,1130,1201, | |
| 743 151 0 0 0 0 18 337 + XP_049281413.1 1152 181 1075 XP_035914596.1 1536 195 1426 19 12,33,52,76,21,3,41,57,35,31,34,33,47,105,114,43,33,71,53, 181,193,226,278,354,375,378,419,476,511,542,576,609,656,761,875,918,951,1022, 195,260,379,465,551,578,591,642,709,749,785,867,910,962,1077,1201,1249,1292,1373, | |
| 731 138 0 0 1 -39 20 312 + XP_049281413.1 1152 247 1077 XP_035914596.1 1536 171 1352 21 50,76,2,30,38,33,95,57,43,19,30,31,26,41,24,42,33,86,39,57,17, 247,297,373,375,405,443,476,571,628,671,690,720,751,777,818,842,884,917,1003,1003,1060, 171,231,317,320,379,422,465,575,642,690,714,749,785,835,886,915,962,1019,1177,1201,1335, | |
| 764 157 0 0 3 -60 15 153 + XP_049281413.1 1152 181 1042 XP_035914596.1 1536 362 1436 18 12,38,66,75,22,41,35,12,45,60,47,67,115,90,57,81,24,34, 181,193,231,297,375,397,438,473,485,530,590,637,704,728,818,875,956,1008, 362,384,475,556,631,658,709,749,785,835,910,962,1077,1125,1225,1292,1378,1402, | |
| 757 175 0 0 3 -45 15 311 + XP_049281413.1 1152 188 1075 XP_035914596.1 1536 188 1431 18 33,133,22,61,41,43,30,27,19,32,68,71,47,105,57,57,57,29, 188,221,354,314,378,419,462,492,519,538,570,652,723,770,875,932,989,1046, 188,231,374,463,524,575,623,658,690,714,756,824,910,962,1077,1201,1335,1402, | |
| 693 134 0 0 3 31 14 287 + XP_049281413.1 1152 181 1039 XP_035914596.1 1536 338 1452 18 21,50,31,75,25,57,43,33,47,47,44,23,48,57,76,10,90,50, 181,202,266,297,375,400,457,500,533,580,627,671,694,742,799,875,899,989, 338,374,424,465,540,575,642,690,733,785,842,891,962,1077,1201,1287,1297,1402, | |
| 709 154 0 0 4 -53 16 293 + XP_049281413.1 1152 265 1075 XP_035914596.1 1536 170 1326 20 49,53,82,48,19,19,90,43,30,27,30,31,45,61,40,95,27,7,33,34, 265,314,375,457,519,538,557,647,690,720,747,777,808,853,835,875,970,1001,1008,1041, 170,229,282,374,422,446,470,575,623,658,690,749,785,835,884,934,1177,1204,1249,1292, | |
| 706 127 0 0 2 -59 17 263 + XP_049281413.1 1152 303 1077 XP_035914596.1 1536 170 1266 19 69,3,117,43,33,76,35,41,57,35,31,45,41,47,24,39,47,35,15, 303,375,378,495,538,571,647,682,723,780,815,846,891,932,979,1003,980,1027,1062, 170,239,247,374,422,465,551,591,642,709,749,785,835,910,962,1053,1130,1206,1251, | |
| 683 137 0 0 1 3 15 201 + XP_049281413.1 1152 181 1004 XP_035914596.1 1536 429 1450 17 21,62,30,41,40,41,47,34,33,47,104,101,38,33,81,19,48, 181,202,264,294,335,378,419,466,500,533,580,684,785,823,856,937,956, 429,465,532,591,642,682,733,785,867,910,962,1076,1206,1249,1292,1378,1402, | |
| 687 154 0 0 3 55 15 139 + XP_049281413.1 1152 181 1077 XP_035914596.1 1536 262 1242 19 12,85,43,19,27,63,43,30,13,52,47,47,58,47,39,76,52,71,17, 181,193,278,321,340,375,438,481,511,557,609,656,703,761,808,861,937,989,1060, 262,279,374,446,470,497,575,623,658,671,733,785,842,910,962,1001,1082,1144,1225, |
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