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nachocab/immgen.tsv

Last active October 17, 2023 15:49
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Human-readable version of IMMGEN annotation codes
Raw
immgen.tsv
activated_T_cells T.8Nve.Sp.OT1 spleen OT1 tg Naïve CD8 OT-I tg 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.OT1.d6.LisOva spleen OT1 tg effectors CD8 day 6 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.OT1.d8.LisOva spleen OT1 tg effectors CD8 day 8 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.OT1.d10.LisOva spleen OT1 tg effectors CD8 day 10 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.OT1.d15.LisOva spleen OT1 tg effectors CD8 day 15 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Mem.Sp.OT1.d45.LisOva spleen OT1 tg Memory CD8 day 45 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Mem.Sp.OT1.d100.LisOva spleen OT1 tg Memory CD8 day 100 Listeria.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.OT1.d5.VSVOva spleen OT1 tg effectors CD8 day 5 VSV.OVA OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Eff.Sp.OT1.d6.VSVOva spleen OT1 tg effectors CD8 day 6 VSV.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Eff.Sp.OT1.d8.VSVOva spleen OT1 tg effectors CD8 day 8 VSV.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Eff.Sp.OT1.d15.VSVOva spleen OT1 tg effectors CD8 day 15 VSV.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Mem.Sp.OT1.d45.VSVOva spleen OT1 tg Memory CD8 day 45 VSV.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Mem.Sp.OT1.d106.VSVOva spleen OT1 tg Memory CD8 day 106 VSV.OVA 4- 8+ 45.1+ OT-I tg > B6.CD45.2 6W spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Eff.Sp.OT1.6hr.LisOva Spleen Ot1 tg Effectors Cd8 6Hr Listeria.OVA OT-I CD45.2 > B6.CD45.1 Listeria.OVA 5x10^3 cfu Transfer of 1x10^6 OTI cells
activated_T_cells T.8Eff.Sp.OT1.12hr.LisOva Spleen Ot1 tg Effectors Cd8 12Hr Listeria.OVA CD8+ CD45.2+ OT-I CD45.2 > B6.CD45.1 6w spleen Listeria.OVA 5x10^3 cfu Transfer of 1x10^6 OTI cells
activated_T_cells T.8Eff.Sp.OT1.24hr.LisOva Spleen Ot1 tg Effectors Cd8 24Hr Listeria.OVA CD8+ CD45.2+ OT-I CD45.2 > B6.CD45.1 6w spleen Listeria.OVA 5x10^3 cfu Transfer of 1x10^6 OTI cells
activated_T_cells T.8Eff.Sp.OT1.48hr.LisOva Spleen Ot1 tg Effectors Cd8 48Hr Listeria.OVA CD8+ CD45.2+ OT-I CD45.2 > B6.CD45.1 6w spleen Listeria.OVA 5x10^3 cfu Transfer of 1x10^6 OTI cells
activated_T_cells T.8Eff.Sp.tet.d8.LisOva Spleen KbOVAp Tet+Polyclonal Effectors Cd8 Day 8 Listeria.OVA 4- 8+ Ova-Tetramer+ B6 6w spleen Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Eff.Sp.tet.d45.LisOva Spleen KbOVAp Tet+Polyclonal Memory Cd8 Day 45 Listeria.OVA 4- 8+ Ova-Tetramer+ B6 6w spleen Listeria.OVA 5x10^3 cfu
activated_T_cells T.8Py44+.Sp pooled female PyMT mammary tumor infiltrating CD8 4-8+44hi B6/45.1 with PyMT tg 20W spleen from tumor bearing mouse
activated_T_cells T.8Py44+.TI spleen memory/effector CD8 from a female 4-8+44hi B6/45.1 with PyMT tg 20W tumor spontaneous tumor infiltrating
activated_T_cells T.8Mem103-.Br.OT1.d20.VSVOva Brain Ot1 tg Effectors Cd8 Day 20 VSV.OVA 4- 8+ 45.1+ 103- OT-I tg > B6.CD45.2 6w brain transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Mem103-.Sp.OT1.d20.VSVOva Spleen Ot1 tg Effectors Cd8 Day 20 VSV.OVA 4- 8+ 45.1+ 103- OT-I tg > B6.CD45.2 6w spleen transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
activated_T_cells T.8Mem103+.Br.OT1.d20.VSVOva Brain Ot1 tg Effectors Cd8 Day 20 VSV.OVA 4- 8+ 45.1+ 103+ OT-I tg > B6.CD45.2 6w brain transfer of 5x10^3 OTI cells VSV.OVA 10^5pfu
B_cells MLP.FL Multilineage Progenitor Lin-AA4+Kit++IL7Ra-B220- B6 FL
B_cells proB.CLP.FL Common Lymphoid Progenitor Lin-AA4+Kit+IL7Ra+B220- B6 FL
B_cells proB.FrA.FL Fr. A (pre-pro-B) Lin-AA4+Kit+IL7Ra+B220+ B6 FL
B_cells proB.FrBC.FL Fr. B/C (pro-B) AA4+IgM-CD19+CD43+HSA+ B6 FL
B_cells preB.FrD.FL Fr D (pre-B) AA4+IgM-CD19+CD43-HSA+ B6 FL
B_cells B.FrE.FL Fr. E (newly-formed B) AA4+ IgM+ CD19+ HSA+ B6 FL
B_cells MLP.BM Multilineage Progenitor Lin-AA4+Kit++IL7Ra-B220- B6 BM
B_cells proB.CLP.BM Common Lymphoid Progenitor Lin-AA4+Kit+IL7Ra+B220- B6 BM
B_cells proB.FrA.BM Fr. A (pre-pro-B) Lin-AA4+Kit+IL7Ra+B220+ B6 BM
B_cells proB.FrBC.BM Fr. B/C (pro-B) AA4+IgM-CD19+CD43+HSA+ B6 BM
B_cells preB.FrC.BM Fr. Cprime (cycling pre-B) AA4+IgM-CD19+CD43+HSA++ B6 BM
B_cells preB.FrD.BM Fr D (pre-B) AA4+IgM-CD19+CD43-HSA+ B6 BM
B_cells B.FrE.BM Fr. E (newly-formed B) AA4+ IgM+ CD19+ HSA+ B6 BM
B_cells B.FrF.BM Fr. F (recirc B) AA4- IgM+ CD19+ B6 BM
B_cells B.T1.Sp T1 (transitional) CD19+B220+IgM++AA4+CD23- B6 SPL
B_cells B.T2.Sp T2 (transitional) CD19+B220+IgM++AA4+CD23+ B6 SPL
B_cells B.T3.Sp T3 (transitional) CD19+B220+IgM+AA4+CD23+ B6 SPL
B_cells B.Fo.Sp Fo (follicuilar) CD19+ B220+ IgM+ AA4- CD23+ B6 SPL
B_cells B.MZ.Sp MZ (Marginal Zone) CD19+ B220+ IgM+ AA4- CD23- CD21/35+ B6 SPL
B_cells B.GC.Sp Germinal Center B cells, Spleen CD19+IgM+IgD-GL7+PNA+ B6 SPL
B_cells B1a.Sp B-1a CD19+ B220+ IgM+ AA4- CD23- CD43+ B6 SPL
B_cells B.Fo.PC Fo-type, peritoneal cavity CD19+ IgM+ CD23+ CD43- CD5- B6 PerC
B_cells B1a.PC B-1a, peritoneal cavity CD19+ IgM++ CD43+ CD5+ B6 PerC
B_cells B1b.PC B-1b, peritoneal cavity CD19+ IgM++ CD43+ CD5- B6 PerC
B_cells B.Fo.LN Lymph node B cells CD19+ B220+ IgMdull AA4- CD23+ CD43- B6 LN
B_cells B.Fo.MLN Mesenteric node B cells CD19+ B220+ IgMdull AA4- CD23+ CD43- CD21/35+ B6 Mesenteric Lymph Node
B_cells B.Pl.AA4+220-.BM Plasma Cells 1 CD19- IgM- CD138+ AA4.1+ B220- B6 Bone marrow
B_cells B.Pl.AA4+220+.BM Plasma Cells 2 CD19- IgM- CD138+ AA4.1+ B220+ B6 Bone marrow
B_cells B.Pl.AA4-.BM Plasma Cells 3 CD19- IgM- CD138+ AA4.1- B6 Bone marrow
dendritic_cells_lymphoid_organs Spleen CD8+ dendritic cell CD11c+ CD8a+ CD4- CD11b- B6 6w spleen
dendritic_cells_lymphoid_organs Spleen CD4+ dendritic cell CD11c+ CD8a- CD4+ CD11b+ B6 6w spleen
dendritic_cells_lymphoid_organs DC.8-4-11b+.Sp Spleen double negative dendritic cell CD11c+ CD8a- CD4- CD11b+ B6 6w spleen
dendritic_cells_lymphoid_organs DC.8-4-11b-.Sp Spleen triple negative dendritic cell CD11c+ CD8a- CD4- CD11b- B6 6w spleen
dendritic_cells_lymphoid_organs DC.pDC.8+.Sp Spleen CD8+ plasmacytoid dendritic cell CD11cint CD8a+ B220+ Gr1+ B6 6w spleen
dendritic_cells_lymphoid_organs DC.pDC.8-.Sp Spleen CD8- plasmacytoid dendritic cell CD11cint CD8a- B220+ Gr1+ B6 6w spleen
dendritic_cells_lymphoid_organs DC.8+.MLN Mesenteric LN CD8+ dendritic cell CD11c+ CD8a+ CD4- CD11b- B6 6w mesenteric LN
dendritic_cells_lymphoid_organs DC.4+.MLN Mesenteric LN CD4+ dendritic cell CD11c+ CD8a- CD4+ CD11b+ B6 6w mesenteric LN
dendritic_cells_lymphoid_organs DC.8-4-11b+.MLN Mesenteric LN double negative dendritic cell CD11c+ CD8a- CD4- CD11b+ B6 6w mesenteric LN
dendritic_cells_lymphoid_organs DC.8-4-11b-.MLN Mesenteric LN triple negative dendritic cell CD11c+ CD8a- CD4- CD11b- B6 6w mesenteric LN
dendritic_cells_lymphoid_organs DC.pDC.8+.MLN Mesenteric LN CD8+ plasmacytoid dendritic cell CD11cint CD8a+ B220+ Gr1+ B6 6w mesenteric LN
dendritic_cells_lymphoid_organs DC.8+.SLN Skin draining LN CD8+ dendritic cell CD11c+ CD8a+ CD4- CD11b- B6 6w skin-draining LN
dendritic_cells_lymphoid_organs DC.4+.SLN Skin draining LN CD4+dendritic cell CD11c+ CD8a- CD4+ CD11b+ B6 6w skin-draining LN
dendritic_cells_lymphoid_organs DC.8-4-11b+.SLN Skin draining LN double negative dendritic cell CD11c+ CD8a- CD4- CD11b+ B6 6w skin-draining LN
dendritic_cells_lymphoid_organs DC.8-4-11b-.SLN Skin draining LN triple negative dendritic cell CD11c+ CD8a- CD4- CD11b- B6 6w skin-draining LN
dendritic_cells_lymphoid_organs DC.pDC.8+.SLN Skin draining LN CD8+ plasmacytoid dendritic cell CD11cint CD8a+ B220+ Gr1+ B6 6w skin-draining LN
dendritic_cells_lymphoid_organs DC.IIhilang+103-11b+.SLN Skin draining LN MHCIIhi langerin+ CD103- CD11b+ dendritic cell CD11c+ MHCIIhi langerin+ CD103- CD11b+ B6.langerin GFP 10w skin-draining LN
dendritic_cells_lymphoid_organs DC.IIhilang+103+11blo.SLN Skin draining LN MHCIIhi langerin+ CD103+ CD11blo dendritic cell CD11c+ MHCIIhi langerin+ CD103+ CD11blo B6.langerin GFP 10w skin-draining LN
dendritic_cells_lymphoid_organs DC.IIhilang-103-11b+.SLN Skin draining LN MHCIIhi langerin- CD103- CD11b+ dendritic cell CD11c+ MHCIIhi langerin- CD103- CD11b+ B6.langerin GFP 10w skin-draining LN
dendritic_cells_lymphoid_organs DC.IIhilang-103-11blo.SLN Skin draining LN MHCIIhi langerin- CD103- CD11b- dendritic cell CD11c+ MHCIIhi langerin- CD103- CD11b- B6.langerin GFP 10w skin-draining LN
dendritic_cells_lymphoid_organs DC.8+.Th Thymus CD8 dendritic cell MHCII+ CD11c+ CD8a+ CD4- CD11b- B6 6w thymus
dendritic_cells_lymphoid_organs DC.8-.Th Thymus double negative dendritic cell MHCII+ CD11c+ CD8a- CD4- CD11b- B6 6w thymus
dendritic_cells_lymphoid_organs DC.103+11b-.LuLN Mediastinal LN CD103+ Dendritic Cell CD11c+ MHCIIhi CD103+ CD11b- B6 6w mediastinal lymph node
dendritic_cells_lymphoid_organs DC.103-11b+.LuLN Mediastinal LN CD11b+ Dendritic Cell CD11c+ MHCIIhi CD103- CD11b+ B6 6w mediastinal lymph node
dendritic_cells_non_lymphoid_tissues DC.103+11b-.SI Small intestine CD103+CD11b- dendritic cells PI- CD45+ MHCII+ CD11chi CD103+ CD11b- B6 6w small intestine
dendritic_cells_non_lymphoid_tissues DC.103+11b+.SI Small intestine lamina propria CD103+ CD11b+ dendritic cells PI- CD45+ MHCII+ CD11chi CD103+ CD11b+ B6 6w small intestine
dendritic_cells_non_lymphoid_tissues DC.103-11b+.Lv Liver CD11b+ macrophage CD45+ CD11c+ MHCII + CD11bhi CD103- B6 8w liver
dendritic_cells_non_lymphoid_tissues DC.103+11b-.Lv Liver CD103+ dendritic cells CD45+ CD11c+ MHCII+ CD11blo CD103+ B6 8w liver
dendritic_cells_non_lymphoid_tissues DC.103+11b-.Salm3.SI Small intestine CD103+CD11b- DCs isolated from mice infected with salmonella typhimurium, day 3 P/I CD45+ MHCII+ CD11chi CD11b- CD103+ CD8+ B6 6w small intestine
dendritic_cells_non_lymphoid_tissues DC.103+11b+.Salm3.SI Small intestine CD103+CD11b+ DCs isolated from mice infected with salmonella typhimurium, day 3 P/I CD45+ MHCII+ CD11chi CD11b+ CD103+ B6 6w small intestine
dendritic_cells_non_lymphoid_tissues DC.LC.Sk Epidermal/Langerhans cell CD45+ MHCII+ CD11c+ CD11b+ B6 8w skin
dendritic_cells_non_lymphoid_tissues DC.103+11b-.Lu Lung CD103+ dendritic cells CD11c+ MHCIIhi CD103+ CD11b- SiglecF- B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.103+.PPAR-.Lu Lung CD103+ dendritic cells from LysMcre PPARgfl/fl mice CD11c+ MHCIIhi CD103+ CD11b- SiglecF- B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.103-11b+24+.Lu Lung CD11b+24+ dendritic cells MHCII+ CD11c+ CD11bhi CD103- CD24+ B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.11b+.PPAR-.Lu Lung CD11b+ dendritic cells from LysMcre PPARgfl/fl mice MHCII+ CD11c+ CD11bhi CD103- SiglecF- B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.103+11b-.PolyIC.Lu Lung CD103+ dendritic cells +Poly(I:C) MHCII+ CD11c+ CD11blo CD103+ B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.103-11b+.PolyIC.Lu Lung CD11b+ dendritic cells +Poly(I:C) MHCII+ CD11c+ CD11bhi CD103- B6 6w lung
dendritic_cells_non_lymphoid_tissues DC.103-11b+F4/80lo.Kd Kidney CD11b+ F4/80lo dendritic cells (P7, CD11b hi) CD45+ CD3- B220- NKp46- CD11c+ MHCII+ CD11b+ F4/80lo B6 6w kidney
dendritic_cells_non_lymphoid_tissues DC.11b-.AT.v2 Adipose Tissue CD11b- Dendritic Cells CD45+ MHCIIhi CD11c+ B6 Fat (Visceral)
dendritic_cells_non_lymphoid_tissues DC.11b+.AT.v2 Adipose Tissue CD11b+ Dendritic Cells CD45+ MHCIIhi CD11c+ CD11b+ N/A Fat (Visceral)
monocytes Mo.6C+II-.Bl Classical Monocytes, MHCII- B220- CD43- CD115+ Ly-6C+ MHCII- B6 6w blood
monocytes Mo.6C+II+.Bl Classical Monocytes, MHCII+ B220- CD43- CD115+ Ly-6C+ MHCII+ B6 6w blood
monocytes Mo.6C-II-.Bl Nonclassical Monocytes, MHCII- B220- CD43+ CD115+ Ly-6C- MHCII- B6 6w blood
monocytes Mo.6C-II+.Bl Nonclassical Monocytes, MHCIIhi B220- CD43- CD115+ Ly-6C- MHCIIhi B6 6w blood
monocytes Mo.6C-IIint.Bl Nonclassical Monocytes, MHCIIint B220- CD43+ CD115+ Ly-6C- MHCIIint B6 6w blood
monocytes Mo.6C+II-.LN Classical Monocytes, MHCII- B220- MHCII- F4/80+ CD11c- CD11bhi NK1.1- Gr1+ B6 6w subcutaneous LN
monocytes Mo.6C-II+.LN Nonclassical Monocytes, MHCII+ CD115+ B220- Ly-6C- MHCII+ F480int CD11cint CD11bhi B6 6w subcutaneous LN
monocytes Mo.6C+II-.BM Classical Monocytes B220- CD3- CD115+ Ly-6C+ MHCII- B6 6w bone marrow
monocytes Mo.6C-II-.BM Nonclassical Monocytes B220- CD3- CD115+ Ly-6C- MHCII- CD43+ B6 6w bone marrow
macrophages_lymphoid_tissue MF.RP.Sp Red pulp MF B220- F4/80hi MHCIIint B6 6w spleen
macrophages_non_lymphoid_tissue MF.11cloSer.SI Small intestine serosal macrophage PI- CD45+ MHCII+ CD11clo CD103- CD11b+ B6 6w small intestine
macrophages_non_lymphoid_tissue MF.103-11b+.Salm3.SI Small intestine CD103-CD11b+ MFs isolated from mice infected with salmonella typhimurium, day 3 P/I CD45+ MHCII+ CD11chi CD11b+ CD103- 6w small intestine
macrophages_non_lymphoid_tissue MF.11cloSer.Salm3.SI Small intestine serosal MFs isolated from mice infected with salmonella typhimurium, day 3 P/I CD45+ MHCII+ CD11clo CD11b+ CD103- B6 6w small intestine
macrophages_non_lymphoid_tissue MF.103-11b+24-.Lu Lung CD11b+24- macrophage MHCII+ CD11c+ CD11bhi CD103- CD24- B6 6w lung
macrophages_non_lymphoid_tissue MF.II+480lo.PC Peritoneal macrophage steady state B220- F4/80lo CD115+ MHCII+ B6 6w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Lu Lung macrophage CD11c+ MHCII- CD11b- CD103- SiglecF+ B6 6w lung
macrophages_non_lymphoid_tissue MF.PPAR-.Lu Lung macrophage from LysMcre PPARgfl/fl mice CD11c+ MHCII- CD11b- CD103- SiglecF+ B6 6w lung
macrophages_non_lymphoid_tissue MF.II-480hi.PC Peritoneal MF steady state F4/80hi CD115hi MHCII- B6 8w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Thio5.II-480hi.PC Peritoneal MF thio-elicited day 5 F4/80hi CD115+ MHCII- B6 8w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Thio5.II+480int.PC Peritoneal MF thio-elicited day 5 F4/80int CD115+ MHCII+ B6 8w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Thio5.II-480int.PC Peritoneal MF thio-elicited day 5 F4/80int CD115+ MHCII- B6 8w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Thio5.II+480lo.PC Peritoneal DC thio-elicited day 5 F4/80lo CD115+ MHCII+ B6 8w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Microglia.CNS Central nervous system microglia CD45lo CD11b+ F4/80+ B6 6w Brain
macrophages_non_lymphoid_tissue MF.Microglia.DAP12-.CNS Central nervous system microglia from DAP12 KO mice CD45lo CD11b+ F4/80+ B6.DAP12-/- 6w Brain
macrophages_non_lymphoid_tissue MF.II-480hi.DAP12-.PC Peritoneal MF steady state from DAP12 KO mice CD115+ B220- F4/80+ B6.DAP12-/- 6w peritoneal cavity
macrophages_non_lymphoid_tissue MF.Lv Liver macrophages (P6) CD45+ lineage– Ly6G– CD11b+ F480+ B6 6w liver
macrophages_non_lymphoid_tissue MF.AT.v2 Adipose Tissue Macrophage CD45+ CD64+ Mertk+ Fat (Visceral)
macrophages_bone_marrow MF.BM Bone marrow macrophages B220- CD3- Ly-6C- CD115int F4/80+ B6 6w bone marrow
macrophages_tummor_associated MF.RTag.TI Tumor, RIP-Tag2, macrophage CD45+ CD11c-/low CD11bhi Gr1low B6 6w tumor
granulocytes GN.BM Neutrophils CD11b+ Gr1+ 7/4hi B6 6w bone marrow
granulocytes GN.Bl Neutrophils from Blood CD11b+ Ly6-G+ B6 6w bone marrow
granulocytes GN.Arth.BM Neutrophils, Arthritic CD11b+ Ly6-G+ B6 6w bone marrow
granulocytes GN.Arth.SynF Neutrophils, Synovial Fluid CD11b+ Ly6-G+ B6 6w bone marrow
granulocytes GN.UrAc.PC Neutrophils, Uric Acid CD11b+ Ly6-G+ B6 6w bone marrow
granulocytes GN.Thio.PC Neutrophils, Thioglycolate CD11b+ Ly6-G+ B6 6w bone marrow
granulocytes GN.Bl.v2 Blood Neutrophils SSChi Ly6Ghi B6 Blood
granulocytes EO.AT.v2 Adipose tissue eosinophil CD11b+ SiglecF+ B6 Fat (Visceral)
granulocytes Eo.BL.v2 Peripheral Blood Eosinophils SSChi SiglecF+ B6 Blood
NK_cells_basic NK.Sp Splenic NK cells CD3-,NK1.1+ B6 Spl ---
NK_cells_basic NK.Lv Liver NK cells CD3-,NK1.1+ B6 Liver ---
NK_cells_precursors preNK.BM Bone marrow precursors CD3-,NK1.1+, Mac1lo,CD43lo B6 BM
NK_cells_precursors neoNK.Sp Neonatal immature NK cells CD3-,NK1.1+ B6 Spl ---
NK_cells_receptor_subsets NK.49H+.Sp Splenic NK cells, Ly49H+ subset CD3-,NK1.1+Ly49H+ B6 Spl ---
NK_cells_receptor_subsets NK.49H-.Sp Splenic NK cells, Ly49H- subset CD3-,NK1.1+Ly49H- B6 Spl ---
NK_cells_receptor_subsets NK.49CI+.Sp Splenic NK cells, Ly49C/I+ subset CD3-,NK1.1+Ly49C/I+ B6 Spl ---
NK_cells_receptor_subsets NK.49CI-.Sp Splenic NK cells, Ly49C/I- subset CD3-,NK1.1+Ly49C/I- B6 Spl ---
NK_cells_genetic_variants NK.b2m-.Sp Splenic NK cells CD3-,NK1.1 xxx
NK_cells_genetic_variants NK.DAP10-.Sp Splenic NK cells CD3-,NK1.1+ B6.DAP10-/- Spl ---
NK_cells_genetic_variants NK.DAP12-.Sp Splenic NK cells CD3-,NK1.1+ B6.DAP12-/- Spl ---
NK_cells_genetic_variants NK.DAP10-12-.Sp Splenic NK cells CD3-,NK1.1+ B6.DAP10-/-DAP12-/- Spl ---
NK_cells_genetic_variants NK.Tbet+.Sp Splenic NK cells CD3-,NK1.1+ B6 7W Spl
NK_cells_genetic_variants NK.Tbet-.Sp Splenic NK cells, Tbet-/- CD3-,NK1.1+ Tbet-/- 17W Spl
NK_cells_activation NK.MCMV1.Sp Spl. NK, day1 post MCMV CD3-,NK1.1+ B6 Spl day 1 post-MCMV
NK_cells_activation NK.H+.MCMV1.Sp Ly49H+ Spl. NK, day1 post MCMV CD3-,NK1.1+Ly49H+ B6 Spl day 1 post-MCMV
NK_cells_activation NK.H-.MCMV1.Sp Ly49H- Spl. NK, day1 post MCMV CD3-,NK1.1+Ly49H- B6 Spl day 1 post-MCMV
NK_cells_activation NK.MCMV7.Sp Spl. NK, day7 post MCMV CD3-,NK1.1+ B6 Spl day 7 post-MCMV
NK_cells_activation NK.H+.MCMV7.Sp Ly49H+ Spl. NK, day7 post MCMV CD3-,NK1.1+Ly49H+ B6 Spl day 7 post-MCMV
NK_cells_activation NK.H-.MCMV7.Sp Ly49H- Spl. NK, day7 post MCMV CD3-,NK1.1+Ly49H- B6 Spl day 7 post-MCMV
NK_cells_activation NK.Mem.CMV.d27.Sp WT mem. NK day 27 after MCMV infectionTCRb- CD45.1+ NK1.1+ Ly49H+ B6 15w Spl day 27 post-MCMV
NK_cells_activation NK.Mem.CMV.Bim-.d27.Sp Bim-/- mem. NK day 27 after MCMV infectioTnCRb- CD45.2+ NK1.1+ Ly49H+ Bim-/- 15w Spl day 27 post-MCMV
stem_cells_multipotent_CD34_Flk2_series SC.LT34F.BM Long-Term reconstituting Stem Cell (LT-HSC) CD34- Flk2- Lin- ckit+ Sca1+ B6 8w bone marrow
stem_cells_multipotent_CD34_Flk2_series SC.ST34F.BM Multipotent Progenitor (ST-HSC) CD34+ Flk2- Lin- ckit+ Sca1+ B6 8w bone marrow
stem_cells_multipotent_CD34_Flk2_series SC.MPP34F.BM Multipotent Orogenitor (MPP) CD34+ Flk2+ Lin- ckit+ Sca1+ B6 8w bone marrow
stem_cells_multipotent_slam_series SC.LTSL.BM Long-Term Reconstituting Stem Cell CD150+ CD48- Lin- AA4.1+ CD43+ IgM- CD24- CD117+ IL7R- B6 8w bone marrow
stem_cells_multipotent_slam_series SC.STSL.BM Short-Term Reconstituting Stem Cell CD150- CD48- Lin- AA4.1+ CD43+ IgM- CD24- CD117+ IL7R- B6 8w bone marrow
stem_cells_multipotent_slam_series SC.LTSL.FL Long-Term Reconstituting Stem Cell CD150+ CD48- Lin- AA4.1+ CD43+ IgM- CD24- CD117+ IL7R- B6 8w fetal liver
stem_cells_multipotent_slam_series SC.STSL.FL Short-Term Reconstituting Stem Cell CD150- CD48- Lin- AA4.1+ CD43+ IgM- CD24- CD117+ IL7R- B6 8w fetal liver
stem_cells_oligopotent SC.CMP.BM Common Myeloid Progenitor Lin- IL7R- Sca1- ckit+ FcgRloCD34+ B6 8w bone marrow
stem_cells_oligopotent SC.MEP.BM Megakaryocyte-Erythroid Progenitor Lin- IL7R- Sca1- ckit+ FcgRloCD34- B6 8w bone marrow
stem_cells_oligopotent SC.GMP.BM Granulocyte-Monocyte Progenitor Lin- IL7R- Sca1- ckit+ FcgRhiCD34+ B6 8w bone marrow
stem_cells_oligopotent SC.MDP.BM Monocyte DC Precursors (MDP) Lin- sca1- ckithiFlt3+ CD115+ B6 8w bone marrow
stem_cells_oligopotent SC.CDP.BM Common DC Precursors (CDP) Lin- sca1- ckitloFlt3+ CD115+ B6 6w bone marrow
stem_cells_oligopotent MLP.FL Multilineage Progenitor Lin- AA4+ Kit++ IL7Ra- B220- B6 15d fetal liver
stem_cells_oligopotent MLP.BM Multilineage Progenitor Lin- AA4+ Kit++ IL7Ra- B220- B6 6w bone marrow
stem_cells_oligopotent proB.CLP.FL Common Lymphoid Progenitor Lin- AA4+ Kit+ IL7Ra+ B220- B6 15d fetal liver
stem_cells_oligopotent proB.FrA.FL Fr. A (pre-pro-B) Lin- AA4+ Kit+ IL7Ra+ B220+ B6 15d fetal liver
stem_cells_oligopotent proB.CLP.BM Common Lymphoid Progenitor Lin- AA4+ Kit+ IL7Ra+ B220- B6 10w bone marrow
stem_cells_oligopotent proB.FrA.BM Fr. A (pre-pro-B) Lin- AA4+ Kit+ IL7Ra+ B220+ B6 10w bone marrow
stromal_cells Ep.MEChi.Th Medullary epithelial cells, MHC II hi CD45- EpCAM+ Ly51- MHCIIhi B6 6W Thymus
stromal_cells Ep.MEClo.Th Medullary epithelial cells. MHC II lo CD45- EpCAM+ Ly51- MHCIIlo B6 6W Thymus
stromal_cells Fi.MTS15+.Th Thymic fibroblasts, MTS 15+ CD45- PDGFRa+ MTS15+ B6 6W Thymus
stromal_cells BEC.MLN mesenteric lymph node blood endothelial cell CD45- CD31+ gp38- B6 Mesenteric LN
stromal_cells LEC.MLN mesenteric lymph node lymphatic endothelial cell CD45- CD31+ gp38+ B6 Mesenteric LN
stromal_cells FRC.MLN mesenteric lymph node fibroblastic reticular cell CD45- CD31- gp38+ PDGFRa+ B6 Mesenteric LN
stromal_cells BEC.SLN cutaneous lymph node blood endothelial cell CD45- CD31+ gp38- B6 subcutaneous LN
stromal_cells LEC.SLN cutaneous lymph node lymphatic endothelial cell CD45- CD31+ gp38+ B6 subcutaneous LN
stromal_cells FRC.SLN cutaneous lymph node fibroblastic reticular cell CD45- CD31- gp38+ PDGFRa+ B6 subcutaneous LN
stromal_cells Fi.Sk skin fibroblast CD45- CD31- gp38+ PDGFRa+ B6 6W skin
stromal_cells St.31-38-44+.SLN cutaneous lymph node CD44+ double negative stromal cell CD45- gp38- CD31- CD44+ B6 6W subcutaneous LN
stromal_cells St.31-38-44-.SLN cutaneous lymph node CD44- double negative stromal cell CD45- gp38- CD31- CD44- B6 6W subcutaneous LN
alpha_beta_t_cells preT.ETP.Th Early T lineage Precursor 4- 8- 11b- 11c- 19- NK1.1- TCR- 44hi 117hi 25- B6 6W Thymus
alpha_beta_t_cells preT.ETP-2A.Th ETP to DN2a Transitional 4- 8- 11b- 11c- 19- NK1.1- TCR- 44hi 117hi 25int B6 6W Thymus
alpha_beta_t_cells preT.DN2.Th Double-Negative 2 4- 8- 11b- 11c- 19- NK1.1- TCR- 44hi 25hi B6 6W Thymus
alpha_beta_t_cells preT.DN2A.Th Double-Negative 2a 4- 8- 11b- 11c- 19- NK1.1- TCR- 44hi 117hi 25hi B6 6W Thymus
alpha_beta_t_cells preT.DN2B.Th Double-Negative 2b 4- 8- 11b- 11c- 19- NK1.1- TCR- 44hi 117int 25hi B6 6W Thymus
alpha_beta_t_cells preT.DN2-3.Th DN2 to DN3 Transitional 4- 8- 11b- 11c- 19- NK1.1- TCR- 44int 25hi B6 6W Thymus
alpha_beta_t_cells preT.DN3A.Th Double-Negative 3a 4- 8- 11b- 11c- 19- NK1.1- TCR- 44- 25hi 28- B6 6W Thymus
alpha_beta_t_cells preT.DN3B.Th Double-Negative 3b 4- 8- 11b- 11c- 19- NK1.1- TCR- 44- 25hi 28+ B6 6W Thymus
alpha_beta_t_cells preT.DN3-4.Th DN3 to DN4 Transitional 4- 8- 11b- 11c- 19- NK1.1- TCR- 44- 25int 28+ B6 6W Thymus
alpha_beta_t_cells T.DN4.Th Double-Negative 4 4- 8- 11b- 11c- 19- NK1.1- TCR- 44- 25- 28+ B6 6W Thymus
alpha_beta_t_cells T.ISP.Th Immature Single-Positive 4- 8+ TCR-/lo 24hi B6 6W Thymus
alpha_beta_t_cells T.DP.Th Double-Positive, all 4+ 8+ TCR-/lo 69- B6 6W Thymus
alpha_beta_t_cells T.DPbl.Th Double-Positive blasts 4+ 8+ TCR-/lo FSChi B6 6W Thymus
alpha_beta_t_cells T.DPbl.MHC-.Th Double-Positive blasts B6 MHC KO 6W Thymus
alpha_beta_t_cells T.DPsm.Th Double-Positive, small resting 4+ 8+ TCR-/lo FSClo B6 6W Thymus
alpha_beta_t_cells T.DPsm.MHC-.Th Double-Positive, small resting B6 MHC KO 6W Thymus
alpha_beta_t_cells T.DP69+.Th Double-Positive, Early Positive Selection 4+ 8+ TCRlo/int 69+ B6 6W Thymus
alpha_beta_t_cells T.4+8int.Th Positive Selection, Intermediate 4+ 8int TCRhi 69+ B6 6W Thymus
alpha_beta_t_cells T.4int8+.Th Positive Selection, Intermediate 4int 8+ TCRhi 69+ B6 6W Thymus
alpha_beta_t_cells T.4SP69+.Th CD4 Single-Positive, Intermediate 4+ 8- TCRhi 69+ B6 6W Thymus
alpha_beta_t_cells T.8SP69+.Th CD8 Single-Positive, Intermediate 4- 8+ TCRhi 69+ B6 6W Thymus
alpha_beta_t_cells T.8SP24int.Th CD8 Single-Positive, Semimature 4- 8+ TCRhi 24int B6 6W Thymus
alpha_beta_t_cells T.8SP24-.Th CD8 Single-Positive, Mature 4- 8+ TCRhi 24-/lo B6 6W Thymus
alpha_beta_t_cells T.4SP24int.Th CD4 Single-Positive, Semimature 4+ 8- TCRhi 24int B6 6W Thymus
alpha_beta_t_cells T.4SP24-.Th CD4 Single-Positive, Mature 4+ 8- TCRhi 24-/lo B6 6W Thymus
alpha_beta_t_cells T.4Nve.Sp Spleen Naïve CD4 4+ 8- TCR+ 25- 62Lhi 44lo B6 6W Spleen
alpha_beta_t_cells T.4Nve.LN Subcutaneous LN Naïve CD4 4+ 8- TCR+ 25- 62Lhi 44lo B6 6W Subc Lymph Nodes
alpha_beta_t_cells T.4Nve.MLN Mesenteric LN Naïve CD4 4+ 8- TCR+ 25- 62Lhi 44lo B6 6W Mes Lymph Nodes
alpha_beta_t_cells T.4Nve.PP Peyers Patches Naïve CD4 4+ 8- TCR+ 25- 62Lhi 44lo B6 6W Peyers Patches
alpha_beta_t_cells T.4Mem.Sp Spleen Memory-Phenotype CD4 4+ 8- TCR+ 25- 44hi 122lo B6 6W Spleen
alpha_beta_t_cells T.4Mem.LN Subcutaneous LN Memory-Phenotype CD4 4+ 8- TCR+ 25- 44hi 122lo B6 6W Subc Lymph Nodes
alpha_beta_t_cells T.4Mem44h62l.LN Subcutaneous LN Memory-Phenotype CD4 4+ 8- TCR+ 44hi 62Lo GFP-Foxp3-CD45.1-B66W Subc Lymph Nodes
alpha_beta_t_cells T.4Mem44h62l.Sp Spleen Memory-Phenotype CD4 4+ 8- TCR+ 44hi 62Lo GFP-Foxp3-CD45.1-B66W Spleen
alpha_beta_t_cells T.8Nve.Sp Spleen Naïve CD8 4- 8+ TCR+ 25- 62Lhi 44lo B6 6W Spleen
alpha_beta_t_cells T.8Nve.LN Subcutaneous LN Naïve CD8 4- 8+ TCR+ 25- 62Lhi 44lo B6 6W Subc Lymph Nodes
alpha_beta_t_cells T.8Nve.MLN Mesenteric LN Naïve CD8 4- 8+ TCR+ 25- 62Lhi 44lo B6 6W Subc Lymph Nodes
alpha_beta_t_cells T.8Nve.PP Peyers Patches Naïve CD8 4- 8+ TCR+ 25- 62Lhi 44lo B6 6W Peyers Patches
alpha_beta_t_cells T.8Mem.Sp Spleen Memory-Phenotype CD8 4- 8+ TCR+ 25- 44hi 122hi B6 6W Spleen
alpha_beta_t_cells T.8Mem.LN Subcutaneous LN Memory-Phenotype CD8 4- 8+ TCR+ 25- 44hi 122hi B6 6W Subc Lymph Nodes
alpha_beta_t_cells T.4FP3-.Sp Spleen Naïve CD4 FoxP3- 25- 4+ 8- TCR+ GFP- 25- 44lo GFP-FoxP3 Knockin 6W Spleen
alpha_beta_t_cells T.4FP3+25+.Sp Spleen CD25+ Foxp3+ Tregs 4+ 8- TCR+ GFP+ 25+ GFP-FoxP3 Knockin 6W Spleen
alpha_beta_t_cells T.4FP3+25+.AA FoxP3+ CD4+, Abdominal Fat 4+ 8- TCR+ 25+ GFP+ GFP-FoxP3 Knockin 6W Abdominal Adipose
alpha_beta_t_cells T.4FP3+25+.LN Lymph Node CD25+ Foxp3+ Tregs 4+ 8- TCR+ GFP+ 25+ GFP-FoxP3 Knockin 14w spleen
alpha_beta_t_cells NKT.4+.Sp Spleen Invariant iNKT CD4+ TCRbeta+ aGalCer tet+ CD4+ B6 6W Spleen
alpha_beta_t_cells NKT.4-.Sp Spleen Invariant iNKT CD4- TCRbeta+ aGalCer tet+ CD4- B6 6W Spleen
alpha_beta_t_cells NKT.4+.Lv Liver Invariant iNKT CD4+ TCRbeta+ aGalCer tet+ CD4+ B6 6W Liver
alpha_beta_t_cells NKT.4-.Lv Liver Invariant iNKT CD4+ TCRbeta+ aGalCer tet+ CD4- B6 6W Liver
alpha_beta_t_cells NKT.4+.Lu Lung Invariant iNKT CD4+ TCRbeta+ aGalCer tet+ CD4+ B6 6W Lung
alpha_beta_t_cells NKT.4-.Lu Lung Invariant iNKT CD4+ TCRbeta+ aGalCer tet+ CD4- B6 6W Lung
alpha_beta_t_cells NKT.44-NK1.1-.Th Thymus Invariant iNKT precursor CD44- NK1.1- TCRbeta+ aGalCer tet+ CD44-NK1.1- B6 6W Thymus
alpha_beta_t_cells NKT.44+NK1.1-.Th Thymus Invariant iNKT precursor CD44+ NK1.1- TCRbeta+ aGalCer tet+ CD44+NK1.1- B6 6W Thymus
alpha_beta_t_cells NKT.44+NK1.1+.Th Thymus Invariant iNKT precursor CD44+ NK1.1+ TCRbeta+ aGalCer tet+ CD44+NK1.1+ B6 6W Thymus
alpha_beta_t_cells T.4Mem.Tbet+.Sp Spleen Memory-Phenotype CD4, Tbet Positive dump- CD4+ CD44hi CD62Llo B6 7W Spleen
alpha_beta_t_cells T.4Mem.Tbet-.Sp Spleen Memory-Phenotype CD4, Tbet -/- dump- CD4+ CD44hi CD62Llo Tbet-/- 17W Spleen
alpha_beta_t_cells T.8Mem.Tbet+.Sp Spleen Memory-Phenotype CD8, Tbet Positive dump- CD8+ CD44hi CD62Llo B6 7W Spleen
alpha_beta_t_cells T.8Mem.Tbet-.Sp Spleen Memory-Phenotype CD8, Tbet -/- dump- CD8+ CD44hi CD62Llo Tbet-/- 17W Spleen
alpha_beta_t_cells T.4.Pa.BDC Pancreas-Infiltrating CD4, BDC islet-reactive TCR Tg BDC.B6g7g7 6W Pancreas
alpha_beta_t_cells T.4.PLN.BDC Pancreatic LN CD4, BDC islet-reactive TCR Tg BDC.B6g7g7 6W Panc Lymph Nodes
alpha_beta_t_cells T.4.LN.BDC Subcutaneous LN CD4, BDC islet-reactive TCR Tg BDC.B6g7g7 6W Subc Lymph Nodes
alpha_beta_t_cells T.4.TI.B16 Tumor-infiltrating CD4, B16 sc B6 6W B16 melanoma Subcutaneous implant
alpha_beta_t_cells T.8.TI.B16 Tumor-infiltrating CD8, B16 sc B6 6W B16 melanoma Subcutaneous implant
alpha_beta_t_cells T.4.Sp.B16 CD4+, spleen from B16 tumor-bearing B6 6W B16 melanoma Subcutaneous implant
alpha_beta_t_cells T.8.Sp.B16 CD8+, spleen from B16 tumor-bearing B6 6W B16 melanoma Subcutaneous implant
gamma_delta_t_cells Tgd.vg3+24ahi.e17.Th Vg3+ TCRd+ CD24+ CD4- CD8- B6 17d thymus xxx
gamma_delta_t_cells Tgd.vg3+24alo.e17.Th Fetal Thymus, DEC Precursor, Mature DN Vg3+ TCRd+ CD24- CD4- CD8- B6 17d thymus
gamma_delta_t_cells Tgd.vg2+24ahi.e17.Th Fetal Thymus Vg2+, Immature DN Vg2+ TCRd+ CD24+ CD4- CD8- B6 17d thymus
gamma_delta_t_cells Tgd.Th Thymic TCRgamma-delta, All DN TCRd+ CD4- CD8- B6 thymus
gamma_delta_t_cells Tgd.vg2+24ahi.Th Thymic Vg2+, Immature Vg2+ TCRd+ CD24+ CD4- CD8- B6 thymus
gamma_delta_t_cells Tgd.vg2+24alo.Th Thymic Vg2+, Mature Vg2+ TCRd+ CD24- CD4- CD8- B6 thymus
gamma_delta_t_cells Tgd.vg2-24ahi.Th Thymic Vg2-, Immature Vg2- TCRd+ CD24+ CD4- CD8- B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6-24ahi.Th Thymic Vg1.1+ Vd6.3-, Immature Vg1.1+ Vd6.3- TCRd+ CD24+ B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6-24alo.Th Thymic Vg1.1+ Vd6.3-, Mature Vg1.1+ Vd6.3- TCRd+ CD24- B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6+24ahi.Th Thymic Vg1.1+ Vd6.3+, Immature Vg1.1+ Vd6.3+ TCRd+ CD24+ B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6+24alo.Th Thymic Vg1.1+ Vd6.3+, Mature Vg1.1+ Vd6.3+ TCRd+ CD24- B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6-.Th Thymic Vg1.1+ Vd6.3- Vg1.1+ Vd6.3- TCRd+ B6 thymus
gamma_delta_t_cells Tgd.vg1+vd6+.Th Thymic Vg1.1+ Vd6.3+ Vg1.1+ Vd6.3+ TCRd+ B6 thymus
gamma_delta_t_cells Tgd.vd1+24ahi.Th Thymic Vd1+, Immature Vg2- Vg1.1- Vg5- TCRd+ CD24+ B6 thymus
gamma_delta_t_cells Tgd.vg5+24ahi.Th Thymic Vg5+, Immature Vg5+ TCRd+ CD24+ B6 thymus
gamma_delta_t_cells Tgd.vg2+.Sp SpleenVg2+, resting Vg2+TCRd+CD44- CD4-CD8- B6 Thy
gamma_delta_t_cells Tgd.vg2+.act.Sp SpleenVg2+, activated Vg2+TCRd+CD44+CD4-CD8- B6 Thy
gamma_delta_t_cells Tgd.vg2-.Sp SpleenVg2-, resting Vg2-TCRd+CD44- CD4-CD8- B6 Thy
gamma_delta_t_cells Tgd.vg2-.act.Sp SpleenVg2-, activated Vg2-TCRd+CD44+ CD4-CD8- B6 Thy
gamma_delta_t_cells Tgd.vg5+.IEL i-IEL Vg5+, resting Vg5+TCRd+CD44-CD8aa+ B6 Thy
gamma_delta_t_cells Tgd.vg5+.act.IEL i-IEL Vg5+, activated Vg5+TCRd+CD44+CD8aa+ B6 Thy
gamma_delta_t_cells Tgd.vg5-.IEL i-IEL Vg5-, resting Vg5- TCRd+ CD44-CD8aa+ B6 Thy
gamma_delta_t_cells Tgd.vg5-.act.IEL i-IEL Vg5-, activated Vg5- TCRd+ CD44+CD8aa+ B6 Thy
gamma_delta_t_cells_genetic_variants Tgd.vg2+24ahi.Th.TCRbko Thymic Aberrant, Vg2+, immature Vg2+TCRd+CD24+CD4-CD8- B6 Tcrb-/- Thymus
gamma_delta_t_cells_genetic_variants Tgd.vg2+24alo.Th.TCRbko Thymic Aberrant, Vg2+, mature Vg2+TCRd+CD24- CD4-CD8- B6 Tcrb-/- Thymus
gamma_delta_t_cells_genetic_variants Tgd.vg2-24ahi.Th.TCRbko Thymic Aberrant, Vg2-, immature Vg2-TCRd+CD24+ CD4-CD8- B6 Tcrb-/- Thymus
gamma_delta_t_cells_genetic_variants Tgd.vg2-24alo.Th.TCRbko Thymic Aberrant, Vg2-, mature Vg2-TCRd+CD24- CD4-CD8- B6 Tcrb-/- Thymus
gamma_delta_t_cells_genetic_variants Tgd.vg2+.Sp.TCRbko Spleen Aberrant, Vg2+, resting Vg2+TCRd+CD44- CD4-CD8- B6 Tcrb-/-
gamma_delta_t_cells_genetic_variants Tgd.vg2-.Sp.TCRbko Spleen Aberrant, Vg2-, resting Vg2-TCRd+CD44- CD4-CD8- B6 Tcrb-/- Spleen
gamma_delta_t_cells_genetic_variants Tgd.vg2-.act.Sp.TCRbko Spleen Aberrant, Vg2-, activated Vg2-TCRd+CD44+ CD4-CD8- B6 Tcrb-/- Spleen
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-24ahi.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3-, Immature Vg1.1+ TCRd+ CD24+ Vd6.3- B6 Tcrb-/- Spleen
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-24alo.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3-, Mature Vg1.1+ TCRd+ CD24- Vd6.3- B6 Tcrb-/-
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6+24ahi.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3+, Immature Vg1.1+ Vd6.3+ TCRd+ CD24+ B6 Tcrb-/- Intestine
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6+24alo.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3+, Mature Vg1.1+ Vd6.3+ TCRd+ CD24- B6 Tcrb-/- Intestine
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3- Vg1.1+ Vd6.3- TCRd+ B6 Tcrb-/- Intestine
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6+.Th.TCRbko Thymic Aberrant, Vg1.1+ Vd6.3+ Vg1.1+ Vd6.3+ TCRd+ B6 Tcrb-/- Intestine
gamma_delta_t_cells_genetic_variants Tgd.vg2+24ahi.Th.ITKko Thymic Aberrant, Vg2+, Immature Vg2+ TCRd+ CD24+ B6 ITK-/-
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-.Th.ITKko Thymic Aberrant, Vg1.1+ Vd6.3- Vg1.1+ Vd6.3- TCRd+ B6 ITK-/- Skin
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6+.Th.ITKko Thymic Aberrant, Vg1.1+ Vd6.3+ Vg1.1+ Vd6.3+ TCRd+ B6 ITK-/-
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-24ahi.Th.ITKko Thymic Aberrant, Vg1.1+ Vd6.3-, Immature Vg1.1+ Vd6.3- TCRd+ CD24+ B6 ITK-/-
gamma_delta_t_cells_genetic_variants Tgd.vg1+vd6-24alo.Th.ITKko Thymic Aberrant, Vg1.1+ Vd6.3-, Mature Vg1.1+ Vd6.3- TCRd+ CD24- B6 ITK-/-
@yingxue-fu
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This is awesome! I have been long looking after for the full names of these immune cell but find it nowhere. This is especially useful for handling the immune cell microarray data stored in the GEO database. Thanks for your efforts.

@atakanekiz
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atakanekiz commented May 6, 2018 •
edited

This is very helpful! I was looking for this everywhere to integrate with an R-code I wrote for comparing single cell RNA seq data. Just wondering, how did you compile this list? Did you somehow pull the data via an XML/flash scraping method from their website?

@chansigit
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This is really helpful! thank you very much!

@flde
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flde commented Jul 13, 2021

Thank you!

@zhongzheng1999
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Thank you very much！

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