ncweiler

% downlad multichannel false-color file
get_mcfc = 1;

% token for desired project
project_token = 'Ex10R55';

% for project-specific channel list and dimensions
% view http://openconnecto.me/ocp/ca/[project_token]/info/

% channels: accessed in CYMRGB order – use zeros to skip colors.

ncweiler

%% get multi-channel hdf5 file

% settings
clear_all = 1;
if clear_all
    clear all
end

% download hdf5 file to current directory
download_hdf5 = 1;

ncweiler

%% Ex10R55 dataset single channel
 
% option to display contrast-enhanced cutout
enhance = 1;
 
% output filename
tmpfile = 'Ex10R55_GFP-4.png';
 
% url arguments
server_base = 'braingraph2.cs.jhu.edu';