Created
April 29, 2019 14:51
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Ubuntu 18.10 missing dependencies
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| root@6cc3ac9c89c3:/# dpkg -i --ignore-depends=libboost-log1.58.0 ont_guppy_2.3.7-1~xenial_amd64.deb | |
| (Reading database ... 15231 files and directories currently installed.) | |
| Preparing to unpack ont_guppy_2.3.7-1~xenial_amd64.deb ... | |
| Unpacking ont-guppy (2.3.7-1~xenial) over (2.3.7-1~xenial) ... | |
| dpkg: dependency problems prevent configuration of ont-guppy: | |
| ont-guppy depends on libcurl4-openssl-dev; however: | |
| Package libcurl4-openssl-dev is not installed. | |
| ont-guppy depends on libssl-dev; however: | |
| Package libssl-dev is not installed. | |
| ont-guppy depends on libhdf5-cpp-11; however: | |
| Package libhdf5-cpp-11 is not installed. | |
| ont-guppy depends on libzmq5; however: | |
| Package libzmq5 is not installed. | |
| ont-guppy depends on libboost-atomic1.58.0; however: | |
| Package libboost-atomic1.58.0 is not installed. | |
| ont-guppy depends on libboost-chrono1.58.0; however: | |
| Package libboost-chrono1.58.0 is not installed. | |
| ont-guppy depends on libboost-date-time1.58.0; however: | |
| Package libboost-date-time1.58.0 is not installed. | |
| ont-guppy depends on libboost-filesystem1.58.0; however: | |
| Package libboost-filesystem1.58.0 is not installed. | |
| ont-guppy depends on libboost-program-options1.58.0; however: | |
| Package libboost-program-options1.58.0 is not installed. | |
| ont-guppy depends on libboost-regex1.58.0; however: | |
| Package libboost-regex1.58.0 is not installed. | |
| ont-guppy depends on libboost-system1.58.0; however: | |
| Package libboost-system1.58.0 is not installed. | |
| root@6cc3ac9c89c3:/# alien ont_guppy_2.3.7-1~xenial_amd64.deb | |
| Warning: Skipping conversion of scripts in package ont-guppy: postinst postrm | |
| Warning: Use the --scripts parameter to include the scripts. | |
| root@6cc3ac9c89c3:/# ./opt/ont/guppy/bin/guppy_basecaller | |
| ./opt/ont/guppy/bin/guppy_basecaller: error while loading shared libraries: libboost_date_time.so.1.58.0: cannot open shared object file: No such file or directory | |
| root@6cc3ac9c89c3:/# ldd ./opt/ont/guppy/bin/guppy_basecaller | |
| linux-vdso.so.1 (0x00007ffd7ff6f000) | |
| libboost_date_time.so.1.58.0 => not found | |
| libboost_filesystem.so.1.58.0 => not found | |
| libboost_log.so.1.58.0 => not found | |
| libboost_log_setup.so.1.58.0 => not found | |
| libboost_program_options.so.1.58.0 => not found | |
| libboost_regex.so.1.58.0 => not found | |
| libboost_thread.so.1.58.0 => not found | |
| libboost_system.so.1.58.0 => not found | |
| libboost_chrono.so.1.58.0 => not found | |
| libboost_atomic.so.1.58.0 => not found | |
| libcuda.so.1 => not found | |
| libdl.so.2 => /lib/x86_64-linux-gnu/libdl.so.2 (0x00007fde85e55000) | |
| librt.so.1 => /lib/x86_64-linux-gnu/librt.so.1 (0x00007fde85e4b000) | |
| libzmq.so.5 => not found | |
| libhdf5_serial.so.10 => not found | |
| libhdf5_serial_hl.so.10 => not found | |
| libcurl.so.4 => not found | |
| libz.so.1 => /lib/x86_64-linux-gnu/libz.so.1 (0x00007fde85c2c000) | |
| libssl.so.1.0.0 => not found | |
| libcrypto.so.1.0.0 => not found | |
| libont_minimap2.so.2 => not found | |
| libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007fde85a9f000) | |
| libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007fde85913000) | |
| libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007fde858f9000) | |
| libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0 (0x00007fde858d8000) | |
| libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007fde856ee000) | |
| /lib64/ld-linux-x86-64.so.2 (0x00007fde85e66000) |
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