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nievergeltlab/name_chromosome_chunk.sh

Created March 13, 2017 16:18
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Get chromosome number and chunk number from file name. For ricopili.
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name_chromosome_chunk.sh
chunknum=$(echo $chunk | sed 's/.*\(chr[0-9]*_[0-9]*_[0-9]*\).*/\1/')
chrnum=$(echo $chunk | sed 's/.*\(chr[0-9]*\).*/\1/')
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