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nimezhu/Causality.js

Last active August 29, 2015 14:01
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Causal Network Visualization
Raw
Causality.js
$(function() {
Backbone.sync = function(method, model, success, error){
success();
}
CausalityView = Backbone.View.extend({
el: $('body'), // el attaches to existing element
attributes: {"width":900,"height":700},
events: {
'change #csv': 'render',
'change #cutoff': 'render',
'change #force':'render'
// 'click button#save' : 'save'
},
initialize: function()
{
_.bindAll(this, 'render');
// every function that uses 'this' as the current object should be in here
this.render("data/H1.csv");
},
render: function()
{
var csv = $("#csv").val();
$("#range").html($(cutoff).val());
var forceval=$("#force").val();
$("#force_range").html(forceval);
d3.csv(csv, function(error, links) {
var nodes = {};
// Compute the distinct nodes from the links.
links.forEach(function(link) {
link.source = nodes[link.source] ||
(nodes[link.source] = {name: link.source});
link.target = nodes[link.target] ||
(nodes[link.target] = {name: link.target});
link.value = +link.value;
});
var dlinks=new Array();
for (var i in links)
{
if(Math.abs(links[i].value)>$("#cutoff").val())
{
dlinks.push(links[i]);
}
}
var width = 900,
height = 700;
var color = d3.scale.linear()
.domain([-3, 0, 3])
.range(["red", "white", "green"]);
var force = d3.layout.force()
.nodes(d3.values(nodes))
.links(dlinks)
.size([width, height])
.linkDistance(60)
.charge(-forceval)
.on("tick", tick)
.start();
d3.select("#div_svg").selectAll("svg").remove();
var svg = d3.select("#div_svg").append("svg")
.attr("width", width)
.attr("height", height);
// build the arrow.
svg.append("svg:defs").selectAll("marker")
.data(["end"])
.enter().append("svg:marker")
.attr("id", String)
.attr("viewBox", "0 -5 10 10")
.attr("refX", 15)
.attr("refY", -1.5)
.attr("markerWidth", 6)
.attr("markerHeight", 6)
.attr("orient", "auto")
.append("svg:path")
.attr("d", "M0,-5L10,0L0,5");
// add the links and the arrows
var path = svg.append("svg:g").selectAll("path")
.data(force.links())
.enter().append("svg:path")
.attr("class", "link")
.attr("marker-end", "url(#end)")
// .style("stroke-width", function(d) { return Math.sqrt(d.value); });
.style("stroke", function(d) { return color(d.value); });
// define the nodes
var node = svg.selectAll(".node")
.data(force.nodes())
.enter().append("g")
.attr("class", "node")
.call(force.drag);
// add the nodes
node.append("circle")
.attr("r", 5);
// add the text
node.append("text")
.attr("x", 12)
.attr("dy", ".35em")
.text(function(d) { return d.name; });
// add the curvy lines
function tick() {
path.attr("d", function(d) {
var dx = d.target.x - d.source.x,
dy = d.target.y - d.source.y,
dr = Math.sqrt(dx * dx + dy * dy);
return "M" +
d.source.x + "," +
d.source.y + "A" +
dr + "," + dr + " 0 0,1 " +
d.target.x + "," +
d.target.y;
});
node
.attr("transform", function(d) {
return "translate(" + d.x + "," + d.y + ")"; });
}
});
}
}
)
var view = new CausalityView({el: 'body'});
});
Raw
Gm12878.csv
source target value
ATF2_(SC-81188) ATF3 0.545483
ATF2_(SC-81188) BATF 0.650474
BCL11A BCL3 0.764824
BCL11A EBF1_(SC-137065) 1.472769
BCLAF1_(SC-101388) Egr-1 0.739691
CEBPB_(SC-150) Egr-1 0.679781
ATF3 ELF1_(SC-631) 0.759033
BCL11A ELF1_(SC-631) -1.612204
BCLAF1_(SC-101388) ELF1_(SC-631) 3.143530
CEBPB_(SC-150) ELF1_(SC-631) 2.986104
Egr-1 ELF1_(SC-631) 0.533405
CEBPB_(SC-150) FOXM1_(SC-502) 0.819918
ATF3 GABP -0.792761
BATF GABP 0.678248
BCL11A GABP -2.805170
BCL3 GABP -0.802627
BCLAF1_(SC-101388) GABP 7.349238
FOXM1_(SC-502) GABP -1.952730
MEF2C_(SC-13268) MEF2A 0.872152
CEBPB_(SC-150) MTA3_(SC-81325) 0.675594
MTA3_(SC-81325) NFATC1_(SC-17834) 0.537094
ATF2_(SC-81188) CREB1_(SC-240) 7.023538
ATF3 CREB1_(SC-240) 3.463867
BCL11A CREB1_(SC-240) -1.727371
BCLAF1_(SC-101388) CREB1_(SC-240) -2.755423
CEBPB_(SC-150) CREB1_(SC-240) -3.072231
FOXM1_(SC-502) CREB1_(SC-240) 1.358874
IRF4_(SC-6059) CREB1_(SC-240) 2.097715
NFIC_(SC-81335) CREB1_(SC-240) -3.794760
PAX5-C20 PAX5-N19 0.521805
CEBPB_(SC-150) Pbx3 -1.436669
FOXM1_(SC-502) Pbx3 2.980388
IRF4_(SC-6059) Pbx3 1.043718
MTA3_(SC-81325) Pbx3 -1.073201
PAX5-N19 Pbx3 0.843337
MTA3_(SC-81325) PML_(SC-71910) 0.536325
PML_(SC-71910) POU2F2 0.529847
BCL11A PU.1 0.737863
IRF4_(SC-6059) PU.1 1.667423
NFIC_(SC-81335) PU.1 0.581332
FOXM1_(SC-502) Rad21 1.438211
IRF4_(SC-6059) Rad21 0.626104
NFIC_(SC-81335) Rad21 -0.829959
PML_(SC-71910) Rad21 -0.542908
NFATC1_(SC-17834) RUNX3_(SC-101553) -0.528948
NFIC_(SC-81335) RUNX3_(SC-101553) 0.855353
CEBPB_(SC-150) RevXlinkChromatin 0.543248
RevXlinkChromatin NRSF 1.000043
CEBPB_(SC-150) Pol2-4H8 -2.312566
FOXM1_(SC-502) Pol2-4H8 -0.586259
MTA3_(SC-81325) Pol2-4H8 -0.849284
PAX5-C20 Pol2-4H8 -1.013539
PAX5-N19 Pol2-4H8 1.992031
PML_(SC-71910) Pol2-4H8 4.109302
POU2F2 Pol2-4H8 1.206290
RevXlinkChromatin Pol2-4H8 -2.230199
BCLAF1_(SC-101388) SIX5 1.186277
ETS1 SIX5 2.080532
FOXM1_(SC-502) SIX5 -0.687147
MEF2C_(SC-13268) SIX5 -0.956926
MTA3_(SC-81325) SIX5 -0.817873
NFATC1_(SC-17834) SIX5 0.644635
RevXlinkChromatin SIX5 0.730530
BCL11A SP1 -0.730617
CEBPB_(SC-150) SP1 -1.551525
FOXM1_(SC-502) SP1 2.348233
IRF4_(SC-6059) SP1 0.664239
MTA3_(SC-81325) SP1 -0.956709
RevXlinkChromatin SP1 1.316196
RevXlinkChromatin SRF 0.631386
MTA3_(SC-81325) STAT5A_(SC-74442) 0.514588
ATF2_(SC-81188) Pol2 -1.649064
BCL3 Pol2 1.140900
CEBPB_(SC-150) Pol2 -3.089632
ETS1 Pol2 0.549559
FOXM1_(SC-502) Pol2 1.421131
IRF4_(SC-6059) Pol2 -1.211673
MEF2C_(SC-13268) Pol2 1.529778
MTA3_(SC-81325) Pol2 -3.349697
NFATC1_(SC-17834) Pol2 -1.672395
NFIC_(SC-81335) Pol2 -2.128988
PML_(SC-71910) Pol2 3.913307
POU2F2 Pol2 1.047958
RevXlinkChromatin Pol2 6.064072
Pol2-4H8 Pol2 1.285169
RXRA Pol2 -0.698328
CEBPB_(SC-150) TAF1 0.843920
MTA3_(SC-81325) TAF1 -0.806053
STAT5A_(SC-74442) TAF1 0.652620
BCL11A TCF12 0.522461
TCF12 TCF3_(SC-349) 0.772315
ATF3 USF-1 4.150948
BCL11A USF-1 -0.916658
CEBPB_(SC-150) USF-1 -2.973581
MEF2C_(SC-13268) USF-1 -0.767240
NFIC_(SC-81335) USF-1 2.994723
RevXlinkChromatin USF-1 2.062163
RXRA USF-1 -0.549718
PAX5-N19 YY1_(SC-281) -1.411481
TAF1 YY1_(SC-281) 1.865163
TCF12 YY1_(SC-281) 1.014268
TCF3_(SC-349) YY1_(SC-281) -0.933306
ATF2_(SC-81188) ZBTB33 0.500913
ETS1 ZBTB33 2.351926
RevXlinkChromatin ZEB1_(SC-25388) 0.869600
CEBPB_(SC-150) H2A.Z 1.716968
IRF4_(SC-6059) H2A.Z 1.166992
MTA3_(SC-81325) H2A.Z 0.839073
NFATC1_(SC-17834) H2A.Z -1.002466
PML_(SC-71910) H2A.Z 0.739570
RevXlinkChromatin H2A.Z 1.485283
MTA3_(SC-81325) H3K4me1 0.568469
CEBPB_(SC-150) H3K4me3 0.847429
NFATC1_(SC-17834) H3K4me3 -0.523799
RevXlinkChromatin H3K4me3 1.249290
STAT5A_(SC-74442) H3K4me3 1.774938
CEBPB_(SC-150) H3K4me2 -0.619032
MTA3_(SC-81325) H3K4me2 1.030629
PML_(SC-71910) H3K4me2 -0.552102
RevXlinkChromatin H3K4me2 0.590147
STAT5A_(SC-74442) H3K4me2 0.574089
H3K4me1 H3K4me2 1.081787
MTA3_(SC-81325) H3K79me2 -0.806870
RevXlinkChromatin H3K79me2 0.506433
STAT5A_(SC-74442) H3K79me2 0.687311
H2A.Z H3K79me2 -0.636469
H3K4me3 H3K79me2 1.223375
H3K27me3 H3K79me2 -0.554213
H3K36me3 H3K79me2 0.737361
CEBPB_(SC-150) H3K9ac -0.861410
FOXM1_(SC-502) H3K9ac 0.588043
MTA3_(SC-81325) H3K9ac 1.570571
NFATC1_(SC-17834) H3K9ac -1.393015
STAT5A_(SC-74442) H3K9ac 0.626541
H3K4me3 H3K9ac 0.560895
H3K36me3 H3K9ac -0.663410
BCLAF1_(SC-101388) H3K27ac -0.656518
IRF4_(SC-6059) H3K27ac 0.509456
MTA3_(SC-81325) H3K27ac 1.434760
NFIC_(SC-81335) H3K27ac 1.305974
PML_(SC-71910) H3K27ac -0.567352
STAT5A_(SC-74442) H3K27ac -1.243907
Input H3K27ac -1.153920
H3K4me1 H3K27ac 0.564843
H3K27me3 H3K27ac 3.615999
H3K9ac H3K27ac 0.993823
Raw
H1.csv
source target value
Egr-1 GABP 0.927284
Egr-1 HDAC2_(SC-6296) 0.549344
HDAC2_(SC-6296) JunD 0.889788
Egr-1 Max 0.520710
HDAC2_(SC-6296) Max 1.287761
Max E2F6 1.077920
HDAC2_(SC-6296) NRSF 2.575296
HDAC2_(SC-6296) Rad21 0.690861
Rad21 CTCF_(SC-5916) 0.659000
RevXlinkChromatin ATF2_(SC-81188) 0.822788
ATF3 CREB1_(SC-240) 2.987770
HDAC2_(SC-6296) CREB1_(SC-240) -0.895474
ATF2_(SC-81188) CREB1_(SC-240) 2.022749
HDAC2_(SC-6296) Sin3Ak-20 0.853472
JunD SP1 0.576194
ATF2_(SC-81188) SP1 0.520757
RevXlinkChromatin SP2_(SC-643) 0.608596
RevXlinkChromatin SP4_(V-20) 0.697704
RevXlinkChromatin TAF7_(SC-101167) -0.900753
ATF2_(SC-81188) TAF7_(SC-101167) 1.261696
ATF2_(SC-81188) YY1_(SC-281) 0.844231
TAF7_(SC-101167) YY1_(SC-281) 0.537337
BCL11A POU5F1_(SC-9081) 0.767581
ATF3 USF-1 4.061606
HDAC2_(SC-6296) USF-1 -0.712786
ATF2_(SC-81188) H3K27ac 0.528657
Sin3Ak-20 H3K27me3 -0.578865
TCF12 H3K27me3 1.630967
BCL11A H3K27me3 -0.704760
H3K27ac H3K27me3 -0.584265
HDAC2_(SC-6296) Pol2-4H8 -0.679322
p300 Pol2-4H8 -0.557026
ATF2_(SC-81188) Pol2-4H8 1.921630
TAF7_(SC-101167) Pol2-4H8 2.151811
Input Pol2-4H8 -0.618690
H2A.Z Pol2-4H8 -0.613887
H3K27ac Pol2-4H8 0.845765
H3K36me3 Pol2-4H8 1.081240
BCL11A Pol2 -1.412940
H2A.Z Pol2 0.633347
Pol2-4H8 Pol2 0.586671
H3K36me3 H3K79me2 0.718798
H2A.Z H3K9ac 0.586854
H3K27ac H3K9ac 1.388948
HDAC2_(SC-6296) TAF1 -0.560018
ATF2_(SC-81188) TAF1 -1.134833
H2A.Z TAF1 0.606452
H3K36me3 TAF1 -0.727857
H3K9ac TAF1 0.731486
RevXlinkChromatin H3K4me1 0.650990
HDAC2_(SC-6296) H3K4me2 1.568314
Sin3Ak-20 H3K4me2 0.580691
BCL11A H3K4me2 -0.951882
POU5F1_(SC-9081) H3K4me2 -0.696752
H2A.Z H3K4me2 2.295569
H3K9me3 H3K4me2 -0.608928
H3K27ac H3K4me2 -0.523758
H4K20me1 H3K4me2 0.880248
H3K4me1 H3K4me2 1.102577
Sin3Ak-20 H3K4me3 0.849565
H2A.Z H3K4me3 1.540965
H3K9ac H3K4me3 0.774931
H4K20me1 H3K4me3 0.674355
H3K4me1 H3K4me3 -1.237262
H3K4me2 H3K4me3 0.540515
Raw
index.html
<!DOCTYPE html>
<html>
<head>
<title>Causality Network Visualization</title>
</head>
<body>
<script src="https://ajax.googleapis.com/ajax/libs/jquery/1.6.1/jquery.min.js"></script>
<script src="http://ajax.cdnjs.com/ajax/libs/json2/20110223/json2.js"></script>
<script src="http://ajax.cdnjs.com/ajax/libs/underscore.js/1.1.6/underscore-min.js"></script>
<script src="http://ajax.cdnjs.com/ajax/libs/backbone.js/0.3.3/backbone-min.js"></script>
<script src="http://d3js.org/d3.v3.min.js" charset="utf-8"></script>
<link rel="stylesheet" href="http://code.jquery.com/ui/1.10.2/themes/smoothness/jquery-ui.css" />
<script src="http://code.jquery.com/jquery-1.9.1.js"></script>
<script src="http://code.jquery.com/ui/1.10.2/jquery-ui.js"></script>
<style>
html,body{margin:5;padding:5;}
/*.myDiv { width: 250px; height: 240px; padding: 0.5em; } */
input { size:200;}
svg {margin: 0 auto;}
.myDiv {
/*border:1px solid black;
-webkit-border-top-left-radius:6px;
-webkit-border-top-right-radius:6px;
-moz-border-radius-topleft:6px;
-moz-border-radius-topright:6px;
border-top-left-radius:6px;
border-top-right-radius:6px;
/*width:300px; */
font-size:9pt; /* or whatever */
/* background-color: aliceblue */
}
.myDiv h2 {
padding:4px;
color:#fff;
margin:0;
background-color:black;
font-size: 10pt; /* or whatever */
font-family:Arial;
}
.myDiv p {
font-family:Arial;
/*padding:4px; */
}
.middle h2 {
padding:4px;
color:#fff;
margin:0;
background-color:navy;
font-size: 10pt; /* or whatever */
font-family:Arial;
}
textarea {
width: 60%;
height: 60%;
border: 3px solid #cccccc;
padding: 3px;
font-family: Tahoma, sans-serif;
background-image: url(bg.gif);
background-position: bottom right;
background-repeat: no-repeat;
}
li:hover {
background-color: #FF0000;
}
path.link {
fill: none;
stroke: #666;
stroke-width: 1.5px;
}
circle {
fill: #ccc;
stroke: #fff;
stroke-width: 1.5px;
}
text {
fill: #000;
font: 10px sans-serif;
pointer-events: none;
}
</style>
<script>
/*
$(function() {
$( "#workspace" ).sortable();
$("#left").sortable();
})
*/
</script>
<div id="workspace" style="position: absolute; top: -20; left: 20; width: 100%; height: 750px; min-width: 900px ">
<div style="position:absolute; float: left; height:100%; width:210px ; left:0; top:0; border: 1px;background-color: aliceblue" id="left">
<div style=" height:33.33%" class="myDiv" >
<h2>Choose a Cell Line</h2>
<!--
<textarea id="INPUT" rows="10" cols="25">YLR332W
</textarea>
<button id="add">Add RNA</button>
<button id="clear" >Clear</button>
<button id="reset" >Reset</button>
-->
<select id="csv">
<option value="H1.csv">H1</option>
<option value="Gm12878.csv">Gm12878</option>
<option value="K562.csv">K562</option>
</select>
<h2>Cutoff</h2>
<!--
<select id="cutoff">
<option value="0.5">0.5</option>
<option value="1.0">1.0</option>
<option value="2.0">2.0</option>
<option value="3.0">3.0</option>
</select>
-->
<input id="cutoff" type="range" min="0.5" max="3" value="0.5" step="0.1" />
<!-- <button id="save" > Save </button> -->
<span id="range"> 0.5 </span>
<h2>force</h2>
<input id="force" type="range" min="100" max="600" value="300" step="10" />
<span id="force_range"> 300 </span>
</div>
<!--
<div style="height:33.33%" class="myDiv" >
<h2>RNA Nucleotide Scores</h2>
<textarea id="PLOT" rows="10" cols="25">
10,20,10,10,20,17,28,14,28,23,24,11,27,22,25,26
</textarea>
<button id="plotScore">Plot Score</button>
</div>
-->
<div style=" height:33.33%" class="myDiv">
<h2>CONSOLE</h2>
<br>
<br>
<div id="OUT" style="font-size: xx-small; word-wrap: break-word; ">
</div>
</div>
</div>
<div id="FIGURE" style=" margin:0 210px ; height:100% ; background-color: white; border: 1px; text-align:center;" class="middle">
<h2>FIGURE</h2>
<div id="loading" style="display:none">
<img src="loading.gif" alt="LOADING">
</div>
<div id="div_svg">
</div>
</div >
<div id="output" style="position: absolute; float: right; height: 100%; width: 210px; right:0 ; top:0; border:1px;background-color: aliceblue" class="myDiv">
<h2>LIST</h2>
<ul id="OUTPUTLIST">
</ul>
</div>
</div>
<div id="float" style=" display:none;background-color: #F5F2D0 ; width: 168px; height 100px; position: absolute; z-index:1; padding: 5px" class=myDiv> <h2>hello</h2>aha </div>
<script type="text/javascript" src="Causality.js"></script>
</body>
</html>
Raw
K562.csv
source target value
BCL3 BCLAF1_(SC-101388) 1.006551
BCL3 CEBPB_(SC-150) 0.538509
CBX3_(SC-101004) CEBPB_(SC-150) 0.550445
ATF3 CREB1_(SC-240) 1.253440
CEBPD_(SC-636) CREB1_(SC-240) 0.535246
CBX3_(SC-101004) CTCF_(SC-5916) 1.460772
CEBPD_(SC-636) CTCF_(SC-5916) -0.856718
CBX3_(SC-101004) Egr-1 1.091503
CEBPD_(SC-636) Egr-1 1.705645
CBX3_(SC-101004) ELF1_(SC-631) 1.708046
CEBPD_(SC-636) ELF1_(SC-631) -0.816851
ETS1 ELF1_(SC-631) 2.682944
CEBPD_(SC-636) GATA2_(SC-267) 0.681054
BCL3 HEY1 1.406557
BCLAF1_(SC-101388) HEY1 2.321544
CEBPB_(SC-150) HEY1 -0.516255
CEBPD_(SC-636) HEY1 4.480580
GATA2_(SC-267) HEY1 -2.380935
HDAC2_(SC-6296) HEY1 -0.611568
CBX3_(SC-101004) NR2F2_(SC-271940) 0.552060
CBX3_(SC-101004) NRSF -1.109535
CTCF_(SC-5916) NRSF 1.672026
CTCFL_(SC-98982) NRSF -1.252474
ETS1 NRSF 0.816851
HDAC2_(SC-6296) NRSF 1.343549
BCLAF1_(SC-101388) Pol2-4H8 0.857072
CEBPD_(SC-636) Pol2-4H8 1.376126
GATA2_(SC-267) Pol2-4H8 -0.660236
PML_(SC-71910) Pol2-4H8 1.242778
RevXlinkChromatin Pol2-4H8 -1.169571
BCLAF1_(SC-101388) Pol2 -0.832222
CEBPD_(SC-636) Pol2 1.222334
GATA2_(SC-267) Pol2 -1.158208
HEY1 Pol2 0.713394
Pol2-4H8 Pol2 0.932430
CBX3_(SC-101004) Max 3.925110
HDAC2_(SC-6296) Max 0.609194
NR2F2_(SC-271940) Max -0.503095
PML_(SC-71910) Max -1.161770
Sin3Ak-20 Max 1.948374
ETS1 SIX5 2.220763
RevXlinkChromatin SIX5 0.947948
Sin3Ak-20 SIX5 -0.953098
BCLAF1_(SC-101388) SP2_(SC-643) 1.418496
SP1 SP2_(SC-643) 3.234999
BCLAF1_(SC-101388) TAF7_(SC-101167) 0.524002
BCLAF1_(SC-101388) THAP1_(SC-98174) -1.072327
SIX5 THAP1_(SC-98174) 0.811531
ATF3 GABP -0.700094
BCL3 GABP -2.741329
BCLAF1_(SC-101388) GABP 21.164886
CBX3_(SC-101004) GABP 5.107490
CEBPB_(SC-150) GABP -0.948032
CTCFL_(SC-98982) GABP -0.777527
ETS1 GABP -2.190297
ELF1_(SC-631) GABP 0.518795
HDAC2_(SC-6296) GABP -1.561966
PML_(SC-71910) GABP 4.340951
RevXlinkChromatin GABP -7.423511
Pol2-4H8 GABP -2.022817
Sin3Ak-20 GABP 4.245988
Max GABP -0.599747
SIX5 GABP 0.865585
TAF7_(SC-101167) GABP -3.323923
TEAD4_(SC-101184) GABP -2.701557
ATF3 USF-1 2.106536
Sin3Ak-20 USF-1 0.738252
TEAD4_(SC-101184) USF-1 -0.950634
BCLAF1_(SC-101388) YY1 -1.213383
PML_(SC-71910) YY1 -1.431656
RevXlinkChromatin YY1 2.278292
TEAD4_(SC-101184) YY1 2.052490
TRIM28_(SC-81411) YY1 1.249605
CEBPD_(SC-636) ZBTB7A_(SC-34508) 1.123096
ETS1 ZBTB7A_(SC-34508) 0.975266
HDAC2_(SC-6296) ZBTB7A_(SC-34508) 0.585139
NR2F2_(SC-271940) ZBTB7A_(SC-34508) 0.705600
TRIM28_(SC-81411) ZBTB7A_(SC-34508) -0.884675
RevXlinkChromatin Input 0.854070
BCL3 TAF1 -1.594105
TRIM28_(SC-81411) TAF1 2.739599
Input TAF1 -1.177245
BCL3 H2A.Z -0.758901
CBX3_(SC-101004) H2A.Z 1.635158
PML_(SC-71910) H2A.Z 0.618654
RevXlinkChromatin H2A.Z 2.446493
BCL3 H3K27ac -1.185981
GATA2_(SC-267) H3K27ac -1.342333
HDAC2_(SC-6296) H3K27ac -0.556184
NR2F2_(SC-271940) H3K27ac 1.458452
PML_(SC-71910) H3K27ac 1.406230
STAT5A_(SC-74442) H3K27ac 2.002808
TRIM28_(SC-81411) H3K27ac 1.122749
RevXlinkChromatin H3K4me1 0.922029
BCL3 H3K4me2 -0.576833
BCLAF1_(SC-101388) H3K4me2 -0.650907
GATA2_(SC-267) H3K4me2 -0.664964
PML_(SC-71910) H3K4me2 1.047730
Sin3Ak-20 H3K4me2 1.271580
TRIM28_(SC-81411) H3K4me2 -0.574909
H2A.Z H3K4me2 0.937562
H3K36me3 H3K4me2 1.056056
PML_(SC-71910) H3K4me3 0.504393
H3K4me1 H3K4me3 -0.504290
H3K4me2 H3K4me3 0.603126
H3K27ac H3K9ac 0.517177
H3K4me3 H3K9ac 0.781314
BCLAF1_(SC-101388) E2F6 0.927467
CBX3_(SC-101004) E2F6 3.274172
GATA2_(SC-267) E2F6 0.874287
NR2F2_(SC-271940) E2F6 -1.374560
Sin3Ak-20 E2F6 -2.532115
Max E2F6 1.311505
TRIM28_(SC-81411) E2F6 -2.787480
RevXlinkChromatin YY1_(SC-281) 0.779602
YY1 YY1_(SC-281) 1.108614
Input YY1_(SC-281) -1.038536
H3K9me1 YY1_(SC-281) -0.527737
H3K9me1 H4K20me1 0.618710
PML_(SC-71910) H3K79me2 -0.514377
RevXlinkChromatin H3K79me2 0.869852
Input H3K79me2 -0.742832
H2A.Z H3K79me2 -0.771504
H3K36me3 H3K79me2 1.108237
H3K9ac H3K79me2 0.536160
H3K9me1 H3K79me2 -1.141509
H3K9me3 H3K79me2 0.680876
H4K20me1 H3K79me2 2.130820
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