Matthew Nitschke nitschkematthew

## vsearch_pick_open_reference_otus.sh
#!/bin/bash

echo "Vsearch started: $(date)";
echo "";

# generate all the proper directories
mkdir -p step1_otus; mkdir -p step2_otus; mkdir -p step3_otus; mkdir -p step4_otus

# must sort because searching done greedily
# see http://drive5.com/usearch/manual/uparseotu_algo.html
	#!/bin/bash

	echo "Vsearch started: $(date)";
	echo "";

	# generate all the proper directories
	mkdir -p step1_otus; mkdir -p step2_otus; mkdir -p step3_otus; mkdir -p step4_otus

	# must sort because searching done greedily
	# see http://drive5.com/usearch/manual/uparseotu_algo.html