Europe PubMed Central provides search functionality for ORCIDs and exposes ORCIDs in article metadata.
rebi is an R Interface to Europe PMC RESTful Web Service provided by rOpenSci.
Load most recent version
require(devtools)
install_github("rebi", "ropensci")
require(rebi)my.df <- search_publications(query = 'AUTHORID:"0000-0002-7635-3473"')
dim(my.df)## [1] 71 24
head(my.df)## id source pmid pmcid
## 1 24773781 MED 24773781 NULL
## 2 24679255 MED 24679255 NULL
## 3 24661787 MED 24661787 NULL
## 4 24862340 MED 24862340 NULL
## 5 24903359 MED 24903359 NULL
## 6 23448600 MED 23448600 PMC3605345
## title
## 1 Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.
## 2 Plant genome sequencing - applications for crop improvement.
## 3 The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation.
## 4 Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades.
## 5 Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection.
## 6 Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration.
## authorString
## 1 Dubos C, Kelemen Z, Sebastian A, Bülow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R.
## 2 Bolger ME, Weisshaar B, Scholz U, Stein N, Usadel B, Mayer KF.
## 3 Zakrzewski F, Schubert V, Viehoever P, Minoche AE, Dohm JC, Himmelbauer H, Weisshaar B, Schmidt T.
## 4 Heitkam T, Holtgräwe D, Dohm JC, Minoche AE, Himmelbauer H, Weisshaar B, Schmidt T.
## 5 Appelhagen I, Thiedig K, Nordholt N, Schmidt N, Huep G, Sagasser M, Weisshaar B.
## 6 Weber B, Heitkam T, Holtgräwe D, Weisshaar B, Minoche AE, Dohm JC, Himmelbauer H, Schmidt T.
## journalTitle issue journalVolume pubYear journalIssn pageInfo
## 1 BMC Genomics NULL 15 2014 1471-2164 317
## 2 Curr Opin Biotechnol NULL 26 2014 0958-1669 31-37
## 3 Plant J 6 78 2014 0960-7412 937-950
## 4 Plant J NULL NULL 2014 0960-7412 NULL
## 5 Planta NULL NULL 2014 0032-0935 NULL
## 6 Mob DNA 1 4 2013 1759-8753 8
## pubType isOpenAccess
## 1 journal article N
## 2 journal article; review; research support, non-u.s. gov't N
## 3 journal article N
## 4 journal article N
## 5 journal article N
## 6 journal article Y
## inEPMC inPMC citedByCount hasReferences hasTextMinedTerms
## 1 N N 0 Y N
## 2 N N 2 Y N
## 3 N N 0 Y N
## 4 N N 0 N N
## 5 N N 0 Y N
## 6 Y N 3 Y Y
## hasDbCrossReferences hasLabsLinks hasTMAccessionNumbers luceneScore
## 1 N N N 1330.388
## 2 N N N 1330.388
## 3 N N N 1330.388
## 4 Y N N 1330.388
## 5 N N N 1330.388
## 6 Y N Y 1162.4257
## doi
## 1 10.1186/1471-2164-15-317
## 2 10.1016/j.copbio.2013.08.019
## 3 10.1111/tpj.12519
## 4 10.1111/tpj.12565
## 5 10.1007/s00425-014-2088-0
## 6 10.1186/1759-8753-4-8
get_author(ext_id="21625184")## fullName firstName lastName initials authorId.type
## 1 Grünwald V Viktor Grünwald V <NA>
## 2 Weikert S Steffen Weikert S <NA>
## 3 Seidel C Christoph Seidel C <NA>
## 4 Busch J Jonas Busch J <NA>
## 5 Johannsen A Antje Johannsen A <NA>
## 6 Fenner M Martin Fenner M ORCID
## 7 Reuter C Christoph Reuter C <NA>
## 8 Ganser A Arnold Ganser A <NA>
## 9 Johannsen M Manfred Johannsen M <NA>
## authorId.value ext_id
## 1 <NA> 21625184
## 2 <NA> 21625184
## 3 <NA> 21625184
## 4 <NA> 21625184
## 5 <NA> 21625184
## 6 0000-0003-1419-2405 21625184
## 7 <NA> 21625184
## 8 <NA> 21625184
## 9 <NA> 21625184
require(plyr)id <- c('24352233', '23928564')
my.data <- ldply(id, get_author)
# tabulate ORCIDs
table(my.data$authorId.value)##
## 0000-0002-5016-5191 0000-0002-7635-3473
## 1 1
Nice!