Nate Vack njvack

## distribution_match.py
# -*- coding: utf-8 -*-

# Written by Nate Vack <njvack@wisc.edu> at the Center for Healthy Minds

# Copyright 2019 Board of Regents of the University of Wisconsin System
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is

## index.html
<!DOCTYPE html>
<meta charset="utf-8">
<style>

.node {
  font: 300 11px "Helvetica Neue", Helvetica, Arial, sans-serif;
  fill: #bbb;
}

.node:hover {

## make_lags.py
#!/usr/bin/env python

"""
Compute stimulus orderings for the mnemonic similarity task, described in:
Stark SM, Stevenson R, Wu C, Rutledge S, & Stark CEL (2015). Stability of
age-related deficits in the mnemonic similarity task across task variations.
Behavioral Neuroscience 129(3), 257-268.

Written by Nate Vack <njvack@wisc.edu> at the Center for Healthy Minds,
University of Wisconsin-Madison, for the mp2 study conducted by Dan Grupe

## convert_dcm2niix.sh
#!/bin/bash

# Written by Jonah Chaiken and Nate Vack
# Support: bit_help@lists.wisc.edu

help=" Usage: convert_dcm2niix.sh <in_file> <out_file>

This program will individually convert a dicom archive file to a NIfTI file.

The input can be either a .tar file containing bzip2'd dicom slices, or a

## dos_line_endings.py
#!/usr/bin/env python
"""
Usage: dos_line_endings

Takes stdin, changes all line endings from \r or \n to \r\n, strips UTF-8
byte-order mark (if any), writes to stdout.
"""

import sys
import re

## convert.py
def convert_three_byte(frame):
    data_out = np.zeros(128, dtype=np.int32)  # You're looking to make a 128-element array of int32.
    data_out.dtype = np.byte
    data_out = data_out.reshape(-1, 4)  # Shape is now (128,4) and dtype is byte
    # Now, copy the data from chans08to00 into data_out. We need to specify which bytes to put it in.
    # Also, we need to reverse the data in frame.
    # You'd change 0:3 to 1:4 if the stuff in frame is big-endian, I think? You'll need to experiment.
    data_out[0:8, 0:3] = frame['chans08to00'][::-1]
    # ... and so on with channels
    data_out.dtype = np.int32

## index.html
<!DOCTYPE html>
<html>
<head>
<meta charset="UTF-8" />
<script type="text/javascript">

window.console = window.console || {}
window.console.log = window.console.log || function() {};

console.log("Hello");

## index.html
<!DOCTYPE html>
<html>
  <head>
    <meta http-equiv="Content-Type" content="text/html;charset=utf-8"/>
    <title>Beeswarm plot - collision detection</title>
    <script type="text/javascript" src="http://mbostock.github.com/d3/d3.js"></script>
    <script type="text/javascript" src="http://mbostock.github.com/d3/d3.geom.js"></script>
    <script type="text/javascript" src="http://mbostock.github.com/d3/d3.layout.js"></script>
  </head>
  <body>

## index.html
<!DOCTYPE html>
<html>
	<head>
	<meta charset="utf-8" />
	<style>
	text { font: 10px sans-serif; }
	</style>
	</head>
	<body>
		<script src="http://d3js.org/d3.v3.min.js"></script>

## memory_watch.rb
#!/usr/bin/env ruby

class HumanBinarySize
  MATCHER = /([\d_,]+) *([kmgtp])?b?/i

  MULTIPLIER = {
    'b' => 1,
    'k' => 2**10,
    'm' => 2**20,
    'g' => 2**30,
	# -- coding: utf-8 --

	# Written by Nate Vack <njvack@wisc.edu> at the Center for Healthy Minds

	# Copyright 2019 Board of Regents of the University of Wisconsin System
	# Permission is hereby granted, free of charge, to any person obtaining a copy
	# of this software and associated documentation files (the "Software"), to deal
	# in the Software without restriction, including without limitation the rights
	# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
	# copies of the Software, and to permit persons to whom the Software is
	<!DOCTYPE html>
	<meta charset="utf-8">
	<style>

	.node {
	font: 300 11px "Helvetica Neue", Helvetica, Arial, sans-serif;
	fill: #bbb;
	}

	.node:hover {
	#!/usr/bin/env python

	"""
	Compute stimulus orderings for the mnemonic similarity task, described in:
	Stark SM, Stevenson R, Wu C, Rutledge S, & Stark CEL (2015). Stability of
	age-related deficits in the mnemonic similarity task across task variations.
	Behavioral Neuroscience 129(3), 257-268.

	Written by Nate Vack <njvack@wisc.edu> at the Center for Healthy Minds,
	University of Wisconsin-Madison, for the mp2 study conducted by Dan Grupe
	#!/bin/bash

	# Written by Jonah Chaiken and Nate Vack
	# Support: bit_help@lists.wisc.edu

	help=" Usage: convert_dcm2niix.sh <in_file> <out_file>

	This program will individually convert a dicom archive file to a NIfTI file.

	The input can be either a .tar file containing bzip2'd dicom slices, or a
	#!/usr/bin/env python
	"""
	Usage: dos_line_endings

	Takes stdin, changes all line endings from \r or \n to \r\n, strips UTF-8
	byte-order mark (if any), writes to stdout.
	"""

	import sys
	import re
	def convert_three_byte(frame):
	data_out = np.zeros(128, dtype=np.int32) # You're looking to make a 128-element array of int32.
	data_out.dtype = np.byte
	data_out = data_out.reshape(-1, 4) # Shape is now (128,4) and dtype is byte
	# Now, copy the data from chans08to00 into data_out. We need to specify which bytes to put it in.
	# Also, we need to reverse the data in frame.
	# You'd change 0:3 to 1:4 if the stuff in frame is big-endian, I think? You'll need to experiment.
	data_out[0:8, 0:3] = frame['chans08to00'][::-1]
	# ... and so on with channels
	data_out.dtype = np.int32
	<!DOCTYPE html>
	<html>
	<head>
	<meta charset="UTF-8" />
	<script type="text/javascript">

	window.console = window.console \|\| {}
	window.console.log = window.console.log \|\| function() {};

	console.log("Hello");
	#!/usr/bin/env ruby

	class HumanBinarySize
	MATCHER = /([\d_,]+) *([kmgtp])?b?/i

	MULTIPLIER = {
	'b' => 1,
	'k' => 2**10,
	'm' => 2**20,
	'g' => 2**30,