Created
April 17, 2022 10:11
Test speed of julia `sum` compared to a for-loop over Float32 values
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using BenchmarkTools | |
using Statistics | |
using GLMakie | |
function simpsum(a) | |
y = zero(eltype(a)) | |
ll = length(a) | |
@inbounds @simd for i in 1:ll #eachindex(a) | |
y += a[i] | |
end | |
y | |
end | |
pwsum(a, blksize) = Base.mapreduce_impl(identity, +, a, 1, length(a), blksize) | |
function timetest(Npt, blksize) | |
mydata = rand(Float32, Npt) | |
tb = @benchmark simpsum($mydata) | |
tc = @benchmark pwsum($mydata, $blksize) | |
[median(tb.times), median(tc.times)] | |
end | |
function acctest(Npt, blksize, Niter=333) | |
data = map(1:Niter) do _ | |
# mydata = rand(Float32, Npt) | |
mydata = randn(Float32, Npt) | |
mydata2 = Float64.(mydata) | |
a = sum(mydata2) | |
b = simpsum(mydata) | |
c = pwsum(mydata, blksize) | |
simp_err = (a-b)/a | |
accu_err = (a-c)/a | |
[simp_err, accu_err] | |
end | |
data = reduce(hcat, data) | |
median(abs.(data), dims=2) | |
# std(data, dims=2) | |
end | |
blksize = 1024 | |
ll = 2 .^ (3:1:23) | |
accu = reduce(hcat, acctest(Npt, blksize) for Npt in ll) | |
times = reduce(hcat, timetest(Npt, blksize) for Npt in ll) | |
f = Figure() | |
ax = Axis( | |
f[1,1], | |
title="Median of absolute relative error", | |
xticks=(1:length(ll), ["2^$(n)" for n in 3:1:23]), | |
# yticks=(1:length(ll), ["10^$(n)" for n in 4:2:22]), | |
yscale=log10, | |
) | |
scatterlines!(ax,accu[1,:], label="simp err") | |
scatterlines!(ax,accu[2,:], label="pwsum err") | |
axislegend(ax, position=:lt) | |
ax2 = Axis( | |
f[2,1], | |
title="Running time", | |
xticks=(1:length(ll), ["2^$(n)" for n in 3:1:23]), | |
# yticks=(1:length(ll), ["10^$(n)" for n in 4:2:22]), | |
yscale=log10, | |
) | |
scatterlines!(ax2,times[1,:], label="simp time") | |
scatterlines!(ax2,times[2,:], label="pwsum time") | |
axislegend(ax2,position=:lt) | |
ax3 = Axis( | |
f[3,1], | |
title="Relative unning time", | |
xticks=(1:length(ll), ["2^$(n)" for n in 3:1:23]), | |
ylim=(0,5), | |
) | |
barplot!(ax3,times[2,:]./times[1,:], label="pwsum time / simp time") | |
axislegend(ax3,position=:lt) |
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