npho

Bootstrap: docker

From: nvcr.io/nvidia/cuda:11.4.2-base-ubuntu20.04

%files
    cuda-pytorch.yml environment.yml

%environment
    export PATH=/opt/conda/bin:${PATH}

npho

Bootstrap: docker

From: continuumio/miniconda3

%environment
    export PATH=/opt/conda/bin:${PATH}

%files
    compute.yml environment.yml

npho

#!/bin/sh

#SBATCH --account=uwit
#SBATCH --partition=compute
#SBATCH --time=08:00:00

#SBATCH --signal=USR2
#SBATCH --ntasks=4
#SBATCH --mem=10G

npho

## npho/monocle3 a Docker container for scRNA-seq lab work

FROM rocker/geospatial:4.0.0

MAINTAINER "Nam Pho" npho@uw.edu

RUN install2.r --error --deps TRUE devtools

# monocle3
RUN R -e \

npho

envs_dirs:
  - /gscratch/scrubbed/npho/conda/envs
pkgs_dirs:
  - /gscratch/scrubbed/npho/conda/pkgs

npho

name: jlab
channels:
  - defaults
  - bioconda
  - conda-forge
dependencies:
  - python=3.7
  - scrublet=0.2.1
  - pip:
    - pandas==1.0.5

npho

Parent Tutorial:

• https://gist.github.com/mattiaslundberg/8620837
• merge with https://landoflinux.com/linux_install_archlinux_process.html

Muktware Tutorial:

• http://www.muktware.io/arch-linux-guide-the-always-up-to-date-arch-linux-tutorial/

Arch Linux Installation Guide:

• https://wiki.archlinux.org/index.php/Installation_guide

npho

Keybase proof

I hereby claim:

• I am npho on github.
• I am npho (https://keybase.io/npho) on keybase.
• I have a public key ASAnv6Q46ED3MgjMg2XShjwwdNbnF1aSq-arEFyP9BqFEwo

To claim this, I am signing this object:

npho

require 'formula'

class ScreenVerticalSplit < Formula
  homepage 'http://www.gnu.org/software/screen/'
  url 'http://ftp.gnu.org/gnu/screen/screen-4.0.3.tar.gz'
  mirror 'http://ftp.gnu.org/gnu/screen/screen-4.0.3.tar.gz'
  sha256 '78f0d5b1496084a5902586304d4a73954b2bfe33ea13edceecf21615c39e6c77'

  head 'git://git.savannah.gnu.org/screen.git', :branch => 'master'