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@ocehugo
Last active July 9, 2018 05:47
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import netCDF4 as nc
import numpy as np
from scipy.signal import resample
import seapy
import inspect
import os
import matplotlib.pyplot as plt
this_folder = os.path.dirname(inspect.getfile(inspect.currentframe()))
output_folder = this_folder+'/outputs/'
gridfiles = {}
gridfiles[
'WC13'] = this_folder + '/wc13_grd.nc'
def genfile_fake_sfc_obs_wc13(i0=20,
i1=23,
dx=0.0,
outfile='sobs_fake_sfc_wc13_basecase.nc'):
grid = gridfiles['WC13']
dt = 3600.0
wcgrd = nc.Dataset(gridfiles['WC13'])
olon = wcgrd['lon_rho'][i0, i0]
olat = wcgrd['lat_rho'][i0, i0]
olon2 = wcgrd['lon_rho'][i1, i1]
olat2 = wcgrd['lat_rho'][i1, i1]
dlon = [olon - dx, olon - dx, olon + dx, olon + dx]
dlat = [olat - dx, olat - dx, olat + dx, olat + dx]
dtemp = np.array([22.2, 22.2, 21.8, 21.8])
qlon = [olon2 - dx, olon2 + dx, olon2, olon2]
qlat = [olat2, olat2, olat2 + dx, olat2 - dx]
qtemp = dtemp
lon = np.ma.masked_invalid(np.hstack([dlon, qlon]))
lat = np.ma.masked_invalid(np.hstack([dlat, qlat]))
temp = np.ma.masked_invalid(np.hstack([dtemp, qtemp]))
data = [
seapy.roms.obs.raw_data("TEMP", "SST_OSTIA", temp.compressed(),
temp * 0 + 0.001, 0.01)
]
obs = seapy.roms.obs.gridder(grid, 1.0, lon, lat, None, data, dt,
"OSTIA SST Obs")
obs.to_netcdf(output_folder + outfile)
return i0, i1, lon, lat, temp, outfile
def genfile_line_wc13(outfile='sobs_fake_sfc_wc13_linecase.nc',
nx=1000,
ny=1000):
grid = gridfiles['WC13']
dt = 3600.0
i0 = 10
i1 = 31
gobj = nc.Dataset(grid)
lon = gobj['lon_rho'][20, 10:30]
lat = gobj['lat_rho'][20, 10:30]
llon = np.ma.masked_invalid(resample([lon[0], lon[-1]], nx))
llat = np.ma.masked_invalid(resample([lat[0], lat[-1]], ny))
temp = llon * 0 + 22
data = [
seapy.roms.obs.raw_data("TEMP", "SST_OSTIA", temp.compressed(),
temp * 0 + 0.001, 0.01)
]
obs = seapy.roms.obs.gridder(grid, 1.0, llon, llat, None, data, dt,
"OSTIA SST Obs")
obs.to_netcdf(output_folder + outfile)
return i0, i1, llon, llat, temp, outfile
def genfile_grid_wc13(outfile='sobs_fake_sfc_wc13_gridcase.nc',
nx=1000,
ny=1000,
dy=0.14):
from scipy.signal import resample
grid = gridfiles['WC13']
dt = 3600.0
i0 = 10
i1 = 31
gobj = nc.Dataset(grid)
lon = gobj['lon_rho'][20, 10:30]
lat = gobj['lat_rho'][20, 10:30]
llon = np.ma.masked_invalid(resample([lon[0], lon[-1]], nx))
llat = np.ma.masked_invalid(resample([lat[0], lat[-1]], ny))
llon = np.hstack([llon, llon, llon])
llat = np.hstack([llat - dy, llat, llat + dy])
# llon = np.hstack([lon + 0.1, lon - 0.1])
# llat = np.hstack([lat + 0.1, lat - 0.1])
temp = llon * 0 + 22
data = [
seapy.roms.obs.raw_data("TEMP", "SST_OSTIA", temp.compressed(),
temp * 0 + 0.001, 0.01)
]
obs = seapy.roms.obs.gridder(grid, 1.0, llon, llat, None, data, dt,
"OSTIA SST Obs")
obs.to_netcdf(output_folder + outfile)
return i0, i1, llon, llat, temp, outfile
def plot_fake_sfc_obs_wc13(i0, i1, lon, lat, temp, outfile, edges='psi'):
grid = nc.Dataset(gridfiles['WC13'])
sobs = nc.Dataset(output_folder + outfile)
fig, ax = plt.subplots()
plt.pcolor(
grid['lon_'+edges][:],
grid['lat_'+edges][:],
grid['lon_'+edges][:] * 0,
facecolor='none',
edgecolor='k',
linewidth=1.,
zorder=9999)
plt.plot(grid['lon_rho'][:], grid['lat_rho'][:], 'k*')
plt.plot(lon, lat, 'b.', markersize=7)
plt.plot(sobs['obs_lon'][:], sobs['obs_lat'][:], 'r.', markersize=3)
n_obs = len(lon)
n_sobs = len(sobs['obs_lon'][:])
tstr = 'Total rawobs %d, total sobs %d' % (n_obs, n_sobs)
plt.title(tstr)
di = (i1 - i0) * 2
plt.axis([
grid['lon_rho'][i0 - di, i0 - di], grid['lon_rho'][i0 + di, i0 + di],
grid['lat_rho'][i0 - di, i0 - di], grid['lat_rho'][i0 + di, i0 + di]
])
def test_wc13_basecase():
plot_fake_sfc_obs_wc13(*genfile_fake_sfc_obs_wc13())
plt.savefig('sobs_fake_sfc_wc13_basecase.png')
def test_wc13_standardcase():
plot_fake_sfc_obs_wc13(*genfile_fake_sfc_obs_wc13(
dx=0.1, outfile='sobs_fake_sfc_wc13_standardcase.nc'))
plt.savefig('sobs_fake_sfc_wc13_standardcase.png')
def test_wc13_cornercase():
plot_fake_sfc_obs_wc13(*genfile_fake_sfc_obs_wc13(
dx=0.32, outfile='sobs_fake_sfc_wc13_cornercase.nc'))
plt.savefig('sobs_fake_sfc_wc13_cornercase.png')
def test_wc13_beyondcase():
plot_fake_sfc_obs_wc13(*genfile_fake_sfc_obs_wc13(
dx=-0.16, outfile='sobs_fake_sfc_wc13_beyondcase.nc'),edges='rho')
plt.savefig('sobs_fake_sfc_wc13_beyondcase_asrho.png')
def test_wc13_linecase():
plot_fake_sfc_obs_wc13(
*genfile_line_wc13(outfile='sobs_fake_sfc_wc13_linecase.nc'))
ax = plt.gca()
ax.axis([-131, -124, 36.0, 37.5])
plt.savefig('sobs_fake_sfc_wc13_linecase.png')
def test_wc13_gridcase():
plot_fake_sfc_obs_wc13(
*genfile_grid_wc13(outfile='sobs_fake_sfc_wc13_gridcase.nc'))
ax = plt.gca()
ax.axis([-131, -124, 36.0, 37.5])
plt.savefig('sobs_fake_sfc_wc13_gridcase.png')
def test_wc13_gridcase_asrho():
plot_fake_sfc_obs_wc13(
*genfile_grid_wc13(outfile='sobs_fake_sfc_wc13_gridcase.nc'), edges='rho')
ax = plt.gca()
ax.axis([-131, -124, 36.0, 37.5])
plt.savefig('sobs_fake_sfc_wc13_gridcase_rhoascorners.png')
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