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Created February 22, 2019 21:41
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pac bio nonsense
[508/508]ubuntu@ip-172-31-15-182:~$
ubuntu@ip-172-31-15-182:~$
ubuntu@ip-172-31-15-182:~$ ls
anaconda crispr_primer.py example_output.csv example_output.csv.dropout isPcr primer3_settings.cnf volume
blat example_input.bed.csv example_output.csv.bed genome plate8primers.csv primer3_settings_dir
ubuntu@ip-172-31-15-182:~$ pwd
/home/ubuntu
ubuntu@ip-172-31-15-182:~$ df -h
Filesystem Size Used Avail Use% Mounted on
udev 3.9G 0 3.9G 0% /dev
tmpfs 799M 8.6M 790M 2% /run
/dev/xvda1 31G 3.0G 28G 10% /
tmpfs 3.9G 0 3.9G 0% /dev/shm
tmpfs 5.0M 0 5.0M 0% /run/lock
tmpfs 3.9G 0 3.9G 0% /sys/fs/cgroup
/dev/xvde 985G 25G 911G 3% /mnt/data
tmpfs 799M 0 799M 0% /run/user/1000
/dev/xvdf 4.9T 70M 4.6T 1% /home/ubuntu/volume
ubuntu@ip-172-31-15-182:~$ cd volume
ubuntu@ip-172-31-15-182:~/volume$ ll
total 8216
drwxrwxrwx 3 root root 4096 Feb 22 03:02 ./
drwxr-xr-x 10 ubuntu ubuntu 4096 Feb 22 03:02 ../
drwxrwxrwx 2 root root 16384 Feb 22 02:58 lost+found/
-rwxrwxrwx 1 ubuntu ubuntu 8388608 Feb 21 02:21 MLE08_Cell_1.tar*
ubuntu@ip-172-31-15-182:~/volume$ untar MLE08_Cell_1.tar
No command 'untar' found, did you mean:
Command 'unar' from package 'unar' (universe)
Command 'unrar' from package 'unrar-free' (universe)
Command 'unrar' from package 'unrar' (multiverse)
untar: command not found
ubuntu@ip-172-31-15-182:~/volume$ tar -h
tar: You must specify one of the '-Acdtrux', '--delete' or '--test-label' options
Try 'tar --help' or 'tar --usage' for more information.
ubuntu@ip-172-31-15-182:~/volume$ tar --help
Usage: tar [OPTION...] [FILE]...
GNU 'tar' saves many files together into a single tape or disk archive, and can
restore individual files from the archive.
Examples:
tar -cf archive.tar foo bar # Create archive.tar from files foo and bar.
tar -tvf archive.tar # List all files in archive.tar verbosely.
tar -xf archive.tar # Extract all files from archive.tar.
Main operation mode:
-A, --catenate, --concatenate append tar files to an archive
-c, --create create a new archive
-d, --diff, --compare find differences between archive and file system
--delete delete from the archive (not on mag tapes!)
-r, --append append files to the end of an archive
-t, --list list the contents of an archive
--test-label test the archive volume label and exit
-u, --update only append files newer than copy in archive
-x, --extract, --get extract files from an archive
Operation modifiers:
--check-device check device numbers when creating incremental
archives (default)
-g, --listed-incremental=FILE handle new GNU-format incremental backup
-G, --incremental handle old GNU-format incremental backup
--ignore-failed-read do not exit with nonzero on unreadable files
--level=NUMBER dump level for created listed-incremental archive
-n, --seek archive is seekable
--no-check-device do not check device numbers when creating
incremental archives
--no-seek archive is not seekable
--occurrence[=NUMBER] process only the NUMBERth occurrence of each file
in the archive; this option is valid only in
conjunction with one of the subcommands --delete,
--diff, --extract or --list and when a list of
files is given either on the command line or via
the -T option; NUMBER defaults to 1
--sparse-version=MAJOR[.MINOR]
set version of the sparse format to use (implies
--sparse)
-S, --sparse handle sparse files efficiently
[462/508] -A, --catenate, --concatenate append tar files to an archive
-c, --create create a new archive
-d, --diff, --compare find differences between archive and file system
--delete delete from the archive (not on mag tapes!)
-r, --append append files to the end of an archive
-t, --list list the contents of an archive
--test-label test the archive volume label and exit
-u, --update only append files newer than copy in archive
-x, --extract, --get extract files from an archive
Operation modifiers:
--check-device check device numbers when creating incremental
archives (default)
-g, --listed-incremental=FILE handle new GNU-format incremental backup
-G, --incremental handle old GNU-format incremental backup
--ignore-failed-read do not exit with nonzero on unreadable files
--level=NUMBER dump level for created listed-incremental archive
-n, --seek archive is seekable
--no-check-device do not check device numbers when creating
incremental archives
--no-seek archive is not seekable
--occurrence[=NUMBER] process only the NUMBERth occurrence of each file
in the archive; this option is valid only in
conjunction with one of the subcommands --delete,
--diff, --extract or --list and when a list of
files is given either on the command line or via
the -T option; NUMBER defaults to 1
--sparse-version=MAJOR[.MINOR]
set version of the sparse format to use (implies
--sparse)
-S, --sparse handle sparse files efficiently
Overwrite control:
-k, --keep-old-files don't replace existing files when extracting,
treat them as errors
--keep-directory-symlink preserve existing symlinks to directories when
extracting
--keep-newer-files don't replace existing files that are newer than
their archive copies
--no-overwrite-dir preserve metadata of existing directories
--one-top-level[=DIR] create a subdirectory to avoid having loose files
extracted
--overwrite overwrite existing files when extracting
--overwrite-dir overwrite metadata of existing directories when
extracting (default)
--recursive-unlink empty hierarchies prior to extracting directory
--remove-files remove files after adding them to the archive
--skip-old-files don't replace existing files when extracting,
silently skip over them
-U, --unlink-first remove each file prior to extracting over it
-W, --verify attempt to verify the archive after writing it
Select output stream:
--ignore-command-error ignore exit codes of children
--no-ignore-command-error treat non-zero exit codes of children as
error
-O, --to-stdout extract files to standard output
--to-command=COMMAND pipe extracted files to another program
Handling of file attributes:
--atime-preserve[=METHOD] preserve access times on dumped files, either
by restoring the times after reading
(METHOD='replace'; default) or by not setting the
times in the first place (METHOD='system')
--clamp-mtime only set time when the file is more recent than
what was given with --mtime
--delay-directory-restore delay setting modification times and
permissions of extracted directories until the end
of extraction
--group=NAME force NAME as group for added files
--mode=CHANGES force (symbolic) mode CHANGES for added files
--mtime=DATE-OR-FILE set mtime for added files from DATE-OR-FILE
-m, --touch don't extract file modified time
--no-delay-directory-restore
-m, --touch don't extract file modified time [385/508] --no-delay-directory-restore
cancel the effect of --delay-directory-restore
option
--no-same-owner extract files as yourself (default for ordinary
users)
--no-same-permissions apply the user's umask when extracting permissions
from the archive (default for ordinary users)
--numeric-owner always use numbers for user/group names
--owner=NAME force NAME as owner for added files
-p, --preserve-permissions, --same-permissions
extract information about file permissions
(default for superuser)
--preserve same as both -p and -s
--same-owner try extracting files with the same ownership as
exists in the archive (default for superuser)
-s, --preserve-order, --same-order
member arguments are listed in the same order as
the files in the archive
--sort=ORDER directory sorting order: none (default), name or
inode
Handling of extended file attributes:
--acls Enable the POSIX ACLs support
--no-acls Disable the POSIX ACLs support
--no-selinux Disable the SELinux context support
--no-xattrs Disable extended attributes support
--selinux Enable the SELinux context support
--xattrs Enable extended attributes support
--xattrs-exclude=MASK specify the exclude pattern for xattr keys
--xattrs-include=MASK specify the include pattern for xattr keys
Device selection and switching:
-f, --file=ARCHIVE use archive file or device ARCHIVE
--force-local archive file is local even if it has a colon
-F, --info-script=NAME, --new-volume-script=NAME
run script at end of each tape (implies -M)
-L, --tape-length=NUMBER change tape after writing NUMBER x 1024 bytes
-M, --multi-volume create/list/extract multi-volume archive
--rmt-command=COMMAND use given rmt COMMAND instead of rmt
--rsh-command=COMMAND use remote COMMAND instead of rsh
--volno-file=FILE use/update the volume number in FILE
Device blocking:
-b, --blocking-factor=BLOCKS BLOCKS x 512 bytes per record
-B, --read-full-records reblock as we read (for 4.2BSD pipes)
-i, --ignore-zeros ignore zeroed blocks in archive (means EOF)
--record-size=NUMBER NUMBER of bytes per record, multiple of 512
Archive format selection:
-H, --format=FORMAT create archive of the given format
FORMAT is one of the following:
gnu GNU tar 1.13.x format
oldgnu GNU format as per tar <= 1.12
pax POSIX 1003.1-2001 (pax) format
posix same as pax
ustar POSIX 1003.1-1988 (ustar) format
v7 old V7 tar format
--old-archive, --portability
same as --format=v7
--pax-option=keyword[[:]=value][,keyword[[:]=value]]...
control pax keywords
--posix same as --format=posix
-V, --label=TEXT create archive with volume name TEXT; at
list/extract time, use TEXT as a globbing pattern
for volume name
Compression options:
-a, --auto-compress use archive suffix to determine the compression
program
-I, --use-compress-program=PROG
program [308/508] -I, --use-compress-program=PROG
filter through PROG (must accept -d)
-j, --bzip2 filter the archive through bzip2
-J, --xz filter the archive through xz
--lzip filter the archive through lzip
--lzma filter the archive through xz
--lzop filter the archive through xz
--no-auto-compress do not use archive suffix to determine the
compression program
-z, --gzip, --gunzip, --ungzip filter the archive through gzip
-Z, --compress, --uncompress filter the archive through compress
Local file selection:
--add-file=FILE add given FILE to the archive (useful if its name
starts with a dash)
--backup[=CONTROL] backup before removal, choose version CONTROL
-C, --directory=DIR change to directory DIR
--exclude=PATTERN exclude files, given as a PATTERN
--exclude-backups exclude backup and lock files
--exclude-caches exclude contents of directories containing
CACHEDIR.TAG, except for the tag file itself
--exclude-caches-all exclude directories containing CACHEDIR.TAG
--exclude-caches-under exclude everything under directories containing
CACHEDIR.TAG
--exclude-ignore=FILE read exclude patterns for each directory from
FILE, if it exists
--exclude-ignore-recursive=FILE
read exclude patterns for each directory and its
subdirectories from FILE, if it exists
--exclude-tag=FILE exclude contents of directories containing FILE,
except for FILE itself
--exclude-tag-all=FILE exclude directories containing FILE
--exclude-tag-under=FILE exclude everything under directories
containing FILE
--exclude-vcs exclude version control system directories
--exclude-vcs-ignores read exclude patterns from the VCS ignore files
-h, --dereference follow symlinks; archive and dump the files they
point to
--hard-dereference follow hard links; archive and dump the files they
refer to
-K, --starting-file=MEMBER-NAME
begin at member MEMBER-NAME when reading the
archive
--newer-mtime=DATE compare date and time when data changed only
--no-null disable the effect of the previous --null option
--no-recursion avoid descending automatically in directories
--no-unquote do not unquote input file or member names
--null -T reads null-terminated names, disable -C
-N, --newer=DATE-OR-FILE, --after-date=DATE-OR-FILE
only store files newer than DATE-OR-FILE
--one-file-system stay in local file system when creating archive
-P, --absolute-names don't strip leading '/'s from file names
--recursion recurse into directories (default)
--suffix=STRING backup before removal, override usual suffix ('~'
unless overridden by environment variable
SIMPLE_BACKUP_SUFFIX)
-T, --files-from=FILE get names to extract or create from FILE
--unquote unquote input file or member names (default)
-X, --exclude-from=FILE exclude patterns listed in FILE
File name transformations:
--strip-components=NUMBER strip NUMBER leading components from file
names on extraction
--transform=EXPRESSION, --xform=EXPRESSION
use sed replace EXPRESSION to transform file
names
File name matching options (affect both exclude and include patterns):
--anchored patterns match file name start
--ignore-case ignore case
--no-anchored patterns match after any '/' (default for
exclusion)
--no-ignore-case case sensitive matching (default)
--no-wildcards verbatim string matching
--no-wildcards-match-slash wildcards do not match '/'
--no-wildcards verbatim string matching [231/508] --no-wildcards-match-slash wildcards do not match '/'
--wildcards use wildcards (default for exclusion)
--wildcards-match-slash wildcards match '/' (default for exclusion)
Informative output:
--checkpoint[=NUMBER] display progress messages every NUMBERth record
(default 10)
--checkpoint-action=ACTION execute ACTION on each checkpoint
--full-time print file time to its full resolution
--index-file=FILE send verbose output to FILE
-l, --check-links print a message if not all links are dumped
--no-quote-chars=STRING disable quoting for characters from STRING
--quote-chars=STRING additionally quote characters from STRING
--quoting-style=STYLE set name quoting style; see below for valid STYLE
values
-R, --block-number show block number within archive with each message
--show-defaults show tar defaults
--show-omitted-dirs when listing or extracting, list each directory
that does not match search criteria
--show-snapshot-field-ranges
show valid ranges for snapshot-file fields
--show-transformed-names, --show-stored-names
show file or archive names after transformation
--totals[=SIGNAL] print total bytes after processing the archive;
with an argument - print total bytes when this
SIGNAL is delivered; Allowed signals are: SIGHUP,
SIGQUIT, SIGINT, SIGUSR1 and SIGUSR2; the names
without SIG prefix are also accepted
--utc print file modification times in UTC
-v, --verbose verbosely list files processed
--warning=KEYWORD warning control
-w, --interactive, --confirmation
ask for confirmation for every action
Compatibility options:
-o when creating, same as --old-archive; when
extracting, same as --no-same-owner
Other options:
-?, --help give this help list
--restrict disable use of some potentially harmful options
--usage give a short usage message
--version print program version
Mandatory or optional arguments to long options are also mandatory or optional
for any corresponding short options.
The backup suffix is '~', unless set with --suffix or SIMPLE_BACKUP_SUFFIX.
The version control may be set with --backup or VERSION_CONTROL, values are:
none, off never make backups
t, numbered make numbered backups
nil, existing numbered if numbered backups exist, simple otherwise
never, simple always make simple backups
Valid arguments for the --quoting-style option are:
literal
shell
shell-always
c
c-maybe
escape
locale
clocale
*This* tar defaults to:
--format=gnu -f- -b20 --quoting-style=escape --rmt-command=/usr/lib/tar/rmt
--rsh-command=/usr/bin/rsh
Report bugs to <bug-tar@gnu.org>.
ubuntu@ip-172-31-15-182:~/volume$ tar -xv MLE08_Cell_1.tar
tar: Refusing to read archive contents from terminal (missing -f option?)
tar: Error is not recoverable: exiting now
tar: Refusing to read archive contents from terminal (missing -f option?) [154/508]tar: Error is not recoverable: exiting now
ubuntu@ip-172-31-15-182:~/volume$ tar -xvf MLE08_Cell_1.tar
ubuntu@ip-172-31-15-182:~/volume$ ll
total 8216
drwxrwxrwx 3 root root 4096 Feb 22 03:02 ./
drwxr-xr-x 10 ubuntu ubuntu 4096 Feb 22 03:02 ../
drwxrwxrwx 2 root root 16384 Feb 22 02:58 lost+found/
-rwxrwxrwx 1 ubuntu ubuntu 8388608 Feb 21 02:21 MLE08_Cell_1.tar*
ubuntu@ip-172-31-15-182:~/volume$ l s-lha
ls: cannot access 's-lha': No such file or directory
ubuntu@ip-172-31-15-182:~/volume$ ls -lha
total 8.1M
drwxrwxrwx 3 root root 4.0K Feb 22 03:02 .
drwxr-xr-x 10 ubuntu ubuntu 4.0K Feb 22 03:02 ..
drwxrwxrwx 2 root root 16K Feb 22 02:58 lost+found
-rwxrwxrwx 1 ubuntu ubuntu 8.0M Feb 21 02:21 MLE08_Cell_1.tar
ubuntu@ip-172-31-15-182:~/volume$ history | grep scp
604 history | grep scp
ubuntu@ip-172-31-15-182:~/volume$ history | grep MLE
522 tar xvf MLE08_Cell_1.tar
524 tar -xvf MLE08_Cell_1.tar
526 tar -xvzf MLE08_Cell_1.tar
527 tar -xf MLE08_Cell_1.tar
529 tar -xvf MLE08_Cell_1.tar
534 sudo tar -xvf MLE08_Cell_1.tar
537 tar -xvf MLE08_Cell_1.tar
543 tar -xvf MLE08_Cell_1.tar
553 mv ../MLE08_Cell_1.tar .
558 mv MLE08_Cell_1.tar volume
561 tar -xvf MLE08_Cell_1.tar
563 tar xvf MLE08_Cell_1.tar
565 sudo chmod 777 MLE08_Cell_1.tar
567 tar xvf MLE08_Cell_1.tar
569 tar -xvf MLE08_Cell_1.tar
571 tar xopft MLE08_Cell_1.tar
572 tar xopf MLE08_Cell_1.tar
574 bash MLE08_Cell_1.tar
575 ./ MLE08_Cell_1.tar
576 ./MLE08_Cell_1.tar
577 tar -xvf MLE08_Cell_1.tar
579 chmod +x MLE08_Cell_1.tar
580 ./MLE08_Cell_1.tar
584 tar -xf MLE08_Cell_1.tar
585 tar -t MLE08_Cell_1.tar
586 tar -tf MLE08_Cell_1.tar
596 untar MLE08_Cell_1.tar
599 tar -xv MLE08_Cell_1.tar
600 tar -xvf MLE08_Cell_1.tar
605 history | grep MLE
ubuntu@ip-172-31-15-182:~/volume$ history |grep sftp
589 sftp gslftp@gslserver.qb3.berkeley.edu
606 history |grep sftp
ubuntu@ip-172-31-15-182:~/volume$ history |grep ftp
589 sftp gslftp@gslserver.qb3.berkeley.edu
590 ftp gslftp@gslserver.qb3.berkeley.edu
606 history |grep sftp
607 history |grep ftp
ubuntu@ip-172-31-15-182:~/volume$ ftp gslftp@gslserver.qb3.berkeley.edu
ftp: gslftp@gslserver.qb3.berkeley.edu: Name or service not known
ftp> ^C
ftp> ^C
ftp> ^C
ftp> ^C
ftp> ^C
ftp> zzxc
?Invalid command
ftp> bye
ubuntu@ip-172-31-15-182:~/volume$ ftp --help
ftp: -: unknown option
ubuntu@ip-172-31-15-182:~/volume$ ftp -h
Usage: { ftp | pftp } [-46pinegvtd] [hostname]
-4: use IPv4 addresses only
-6: use IPv6, nothing else
-p: enable passive mode (default for pftp)
-i: turn off prompting during mget
-n: inhibit auto-login
-i: turn off prompting during mget [77/508] -n: inhibit auto-login
-e: disable readline support, if present
-g: disable filename globbing
-v: verbose mode
-t: enable packet tracing [nonfunctional]
-d: enable debugging
ubuntu@ip-172-31-15-182:~/volume$ ftp gslserver.qb3.berkeley.edu
Connected to gslserver.qb3.berkeley.edu.
220 (vsFTPd 3.0.3)
Name (gslserver.qb3.berkeley.edu:ubuntu): gslftp
331 Please specify the password.
Password:
230 Login successful.
Remote system type is UNIX.
Using binary mode to transfer files.
ftp> ls
500 Illegal PORT command.
ftp: bind: Address already in use
ftp> dir()
?Invalid command
ftp> ?
Commands may be abbreviated. Commands are:
! dir mdelete qc site
$ disconnect mdir sendport size
account exit mget put status
append form mkdir pwd struct
ascii get mls quit system
bell glob mode quote sunique
binary hash modtime recv tenex
bye help mput reget tick
case idle newer rstatus trace
cd image nmap rhelp type
cdup ipany nlist rename user
chmod ipv4 ntrans reset umask
close ipv6 open restart verbose
cr lcd prompt rmdir ?
delete ls passive runique
debug macdef proxy send
ftp> dir
500 Illegal PORT command.
ftp> ls
500 Illegal PORT command.
ftp> passive
Passive mode on.
ftp> ls
227 Entering Passive Mode (169,229,219,193,140,85).
150 Here comes the directory listing.
drwxrwxr-x 3 ftp ftp 155 Jan 07 23:16 190104_300PE_MS2
drwxrwxr-x 3 ftp ftp 147 Jan 07 23:11 190105_150PEnano_MS1
drwxrwxr-x 5 ftp ftp 55 Jan 18 07:23 190107_50SR_HS4KA
drwxrwxr-x 4 ftp ftp 42 Jan 10 20:04 190108_50SR_HS4K2B
drwxrwxr-x 3 ftp ftp 147 Jan 10 19:29 190108_75PE_MS1
drwxrwxr-x 4 ftp ftp 42 Jan 16 18:51 190109_10X_HS4KB
drwxrwxr-x 3 ftp ftp 4096 Jan 22 10:11 190110_335x265_HS3B
drwxrwxr-x 8 ftp ftp 4096 Jan 15 16:35 190111_100PE_HS4K2A
drwxrwxr-x 3 ftp ftp 149 Jan 15 12:04 190111_300PE_MS2
drwxrwxr-x 3 ftp ftp 149 Jan 17 22:21 190114_300PE_MS1
drwxrwxr-x 3 ftp ftp 100 Jan 16 19:43 190115_250SR_MS2
drwxrwxr-x 4 ftp ftp 42 Jan 22 18:23 190116_150SR_HS4K2A
drwxrwxr-x 4 ftp ftp 42 Jan 23 08:32 190116_150SR_HS4K2B
drwxrwxr-x 3 ftp ftp 4096 Jan 22 10:24 190116_335x265_HS3B
drwxrwxr-x 6 ftp ftp 4096 Jan 22 08:40 190117_50SR_HS4KB
drwxrwxr-x 3 ftp ftp 145 Jan 23 09:13 190118_300PE_MS1
drwxrwxr-x 3 ftp ftp 54 Jan 22 19:51 190120_150PE_MS1
drwxrwxr-x 4 ftp ftp 42 Jan 29 09:26 190123_150PE_HS4KB
drwxrwxr-x 4 ftp ftp 44 Jan 28 18:46 190123_150SR_MS2
drwxrwxr-x 3 ftp ftp 4096 Jan 25 20:49 190123_50PER_HS3B
drwxrwxr-x 4 ftp ftp 42 Jan 25 19:54 190123_50SR_HS4K2B
drwxrwxr-x 3 ftp ftp 144 Feb 01 16:32 190129_300PE_MS1
drwxrwxr-x 3 ftp ftp 4096 Feb 01 02:21 190130_50PER_HS3A
drwxrwxr-x 3 ftp ftp 4096 Feb 01 02:17 190130_50PER_HS3B
drwxrwxr-x 5 ftp ftp 54 Jan 31 22:01 190130_50SR_HS4KB
drwxrwxr-x 7 ftp ftp 4096 Feb 04 23:15 190131_100PE_HS4K2A
drwxrwxr-x 9 ftp ftp 4096 Feb 05 01:41 190131_150SR_HS4K2B
drwxrwxr-x 3 ftp ftp 101 Feb 06 04:00 190131_150SR_HS4K2B_L1
drwxrwxr-x 9 ftp ftp 4096 Feb 05 01:41 190131_150SR_HS4K2B
drwxrwxr-x 3 ftp ftp 101 Feb 06 04:00 190131_150SR_HS4K2B_L1
drwxrwxr-x 3 ftp ftp 4096 Feb 06 23:59 190131_335x265_HS3A
drwxrwxr-x 3 ftp ftp 146 Feb 06 23:11 190201_300PE_MS1
drwxrwxr-x 3 ftp ftp 146 Feb 06 23:20 190201_300PE_MS2
drwxrwxr-x 4 ftp ftp 4096 Feb 06 10:35 190202_10X_HS4KA
drwxrwxr-x 8 ftp ftp 4096 Feb 11 22:28 190207_50SR_HS4K2A
drwxrwxr-x 4 ftp ftp 42 Feb 12 20:44 190208_100PE_HS4KA
drwxrwxr-x 6 ftp ftp 72 Feb 14 00:06 190208_150PE_HS4KB
drwxrwxr-x 3 ftp ftp 145 Feb 13 07:03 190211_26x274_MS2
drwxrwxr-x 3 ftp ftp 148 Feb 14 20:37 190211_300PE_MS1
drwxrwxr-x 3 ftp ftp 100 Feb 15 18:23 190212_150SR_MS2
drwxrwxr-x 8 ftp ftp 4096 Feb 15 19:30 190213_50SR_HS4K2A
drwxrwxr-x 3 ftp ftp 145 Feb 15 18:19 190214_26x274nano_MS2
drwxrwxr-x 4 ftp ftp 42 Feb 19 07:21 190215_100PE_HS4KB
drwxrwxr-x 3 ftp ftp 23 Feb 20 08:26 190215_150PER_HS3A
drwxrwxr-x 3 ftp ftp 148 Feb 19 03:28 190215_300PE_MS1
drwxrwxr-x 4 ftp ftp 120 Feb 20 03:34 190219_26nano_MS1
drwxrwxr-x 3 ftp ftp 51 Feb 22 16:59 190219_300PE_MS2
drwxrwxr-x 3 ftp ftp 147 Feb 21 22:43 190220_75PE_MS2
drwxrwxr-x 2 ftp ftp 4096 Feb 20 20:59 190220_Sharo_test
drwxrwxr-x 3 ftp ftp 151 Feb 01 22:50 Alexandre_181106_fixed
drwxrwxr-x 2 ftp ftp 6 Jan 15 23:35 Amplicons
drwxrwxr-x 16 ftp ftp 8192 Feb 20 21:00 Exomes
drwxrwxr-x 14 ftp ftp 4096 Feb 19 21:30 GSL_Repost
drwxrwxr-x 5 ftp ftp 90 Nov 26 21:17 NovaSeq
drwxrwxr-x 2 ftp ftp 6 Aug 28 23:17 ONT
drwxrwxr-x 20 ftp ftp 4096 Feb 22 21:22 PacBio
drwxrwxr-x 2 ftp ftp 102 Dec 17 06:10 PacBio_181214_gigagen
drwxrwxr-x 3 ftp ftp 93 Jan 29 07:17 PacBio_190125_gigagen
drwxr-xr-x 38 ftp ftp 4096 Feb 20 17:11 iTag
226 Directory send OK.
ftp>
MLE08_Cell_1.tar lost+found/
ftp> cd
(remote-directory) ls
550 Failed to change directory.
ftp> cd PacBio/190206_MLE08
250 Directory successfully changed.
ftp> ls
227 Entering Passive Mode (169,229,219,193,232,18).
150 Here comes the directory listing.
-rw-rw-r-- 1 ftp ftp 1310 Feb 06 19:29 MLE08_Cell_1.md5
-rw-rw-r-- 1 ftp ftp 188080906240 Feb 06 19:29 MLE08_Cell_1.tar
226 Directory send OK.
ftp> ls -lha
227 Entering Passive Mode (169,229,219,193,166,106).
150 Here comes the directory listing.
drwxrwxr-x 2 ftp ftp 64 Feb 06 19:37 .
drwxrwxr-x 20 ftp ftp 4096 Feb 22 21:22 ..
-rw-rw-r-- 1 ftp ftp 1310 Feb 06 19:29 MLE08_Cell_1.md5
-rw-rw-r-- 1 ftp ftp 188080906240 Feb 06 19:29 MLE08_Cell_1.tar
226 Directory send OK.
ftp> ?
Commands may be abbreviated. Commands are:
! dir mdelete qc site
$ disconnect mdir sendport size
account exit mget put status
append form mkdir pwd struct
ascii get mls quit system
bell glob mode quote sunique
binary hash modtime recv tenex
bye help mput reget tick
case idle newer rstatus trace
cd image nmap rhelp type
cdup ipany nlist rename user
chmod ipv4 ntrans reset umask
close ipv6 open restart verbose
cr lcd prompt rmdir ?
delete ls passive runique
debug macdef proxy send
ftp> binary
200 Switching to Binary mode.
ftp> get MLE08_Cell_1.tar
local: MLE08_Cell_1.tar remote: MLE08_Cell_1.tar
227 Entering Passive Mode (169,229,219,193,185,227).
150 Opening BINARY mode data connection for MLE08_Cell_1.tar (188080906240 bytes).

automatically re-reuns ls -lha every 2 secons

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