Last active
August 29, 2015 14:02
-
-
Save otsaw/f15a68e841e78187e79f to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| *** caught segfault *** | |
| address (nil), cause 'unknown' | |
| *** glibc detected *** /usr/lib/R/bin/exec/R: corrupted double-linked list: 0x0000000004369b30 *** | |
| ======= Backtrace: ========= | |
| /lib/x86_64-linux-gnu/libc.so.6(+0x76d76)[0x7ff267663d76] | |
| /lib/x86_64-linux-gnu/libc.so.6(+0x7a6a4)[0x7ff2676676a4] | |
| /lib/x86_64-linux-gnu/libc.so.6(__libc_malloc+0x70)[0x7ff267668c00] | |
| /usr/lib/R/lib/libR.so(R_AllocStringBuffer+0x78)[0x7ff267ea9948] | |
| /usr/lib/R/lib/libR.so(+0x92140)[0x7ff267e34140] | |
| /usr/lib/R/lib/libR.so(+0x93956)[0x7ff267e35956] | |
| /usr/lib/R/lib/libR.so(+0x950d6)[0x7ff267e370d6] | |
| /usr/lib/R/lib/libR.so(+0xc338e)[0x7ff267e6538e] | |
| /usr/lib/R/lib/libR.so(+0x1010fd)[0x7ff267ea30fd] | |
| /lib/x86_64-linux-gnu/libpthread.so.0(+0xf030)[0x7ff267987030] | |
| /usr/lib/R/lib/libR.so(+0x10938f)[0x7ff267eab38f] | |
| /usr/lib/R/lib/libR.so(Rf_allocVector3+0x239)[0x7ff267eadf19] | |
| /usr/lib/R/lib/libR.so(+0xacffc)[0x7ff267e4effc] | |
| /usr/lib/R/lib/libR.so(+0xad05f)[0x7ff267e4f05f] | |
| /usr/lib/R/lib/libR.so(+0xac974)[0x7ff267e4e974] | |
| /usr/lib/R/lib/libR.so(Rf_duplicate+0x1a)[0x7ff267e4f7ea] | |
| /usr/lib/R/lib/libR.so(+0x10f5a8)[0x7ff267eb15a8] | |
| /usr/lib/R/lib/libR.so(+0x1101bc)[0x7ff267eb21bc] | |
| /usr/lib/R/lib/libR.so(+0xcd27b)[0x7ff267e6f27b] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd9dfe)[0x7ff267e7bdfe] | |
| /usr/lib/R/lib/libR.so(+0xdb337)[0x7ff267e7d337] | |
| /usr/lib/R/lib/libR.so(+0xcebd8)[0x7ff267e70bd8] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd9dfe)[0x7ff267e7bdfe] | |
| /usr/lib/R/lib/libR.so(+0xda59b)[0x7ff267e7c59b] | |
| /usr/lib/R/lib/libR.so(+0xd9998)[0x7ff267e7b998] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(+0xda59b)[0x7ff267e7c59b] | |
| /usr/lib/R/lib/libR.so(+0xd9998)[0x7ff267e7b998] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(+0xda59b)[0x7ff267e7c59b] | |
| /usr/lib/R/lib/libR.so(+0xd9998)[0x7ff267e7b998] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(+0xda59b)[0x7ff267e7c59b] | |
| /usr/lib/R/lib/libR.so(+0xd9998)[0x7ff267e7b998] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd4d35)[0x7ff267e76d35] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd4d35)[0x7ff267e76d35] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd4d35)[0x7ff267e76d35] | |
| /usr/lib/R/lib/libR.so(+0xd9d20)[0x7ff267e7bd20] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd9dfe)[0x7ff267e7bdfe] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(_ZN4Rcpp9Rcpp_evalEP7SEXPRECS1_+0x114)[0x7ff261752ee4] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(_ZN4Rcpp8internal23convert_using_rfunctionEP7SEXPRECPKc+0x5a)[0x7ff26175313a] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(_ZN4Rcpp14DataFrame_ImplINS_15PreserveStorageEE5set__EP7SEXPREC+0x36)[0x7ff261753646] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(_ZN4Rcpp14DataFrame_ImplINS_15PreserveStorageEEC1EP7SEXPREC+0x24)[0x7ff2617839f4] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(_Z13as_regular_dfN4Rcpp14DataFrame_ImplINS_15PreserveStorageEEE+0x21)[0x7ff261770931] | |
| /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so(dplyr_as_regular_df+0x28)[0x7ff26174d938] | |
| /usr/lib/R/lib/libR.so(+0x9abed)[0x7ff267e3cbed] | |
| /usr/lib/R/lib/libR.so(+0xda291)[0x7ff267e7c291] | |
| /usr/lib/R/lib/libR.so(+0xdd7b7)[0x7ff267e7f7b7] | |
| /usr/lib/R/lib/libR.so(+0xda0a7)[0x7ff267e7c0a7] | |
| /usr/lib/R/lib/libR.so(Rf_applyClosure+0x403)[0x7ff267e80e63] | |
| /usr/lib/R/lib/libR.so(+0xd9dfe)[0x7ff267e7bdfe] | |
| /usr/lib/R/lib/libR.so(+0xdd7b7)[0x7ff267e7f7b7] | |
| ======= Memory map: ======== | |
| 00400000-00401000 r-xp 00000000 08:01 791811 /usr/lib/R/bin/exec/R | |
| 00600000-00601000 r--p 00000000 08:01 791811 /usr/lib/R/bin/exec/R | |
| 00601000-00602000 rw-p 00001000 08:01 791811 /usr/lib/R/bin/exec/R | |
| 014e2000-10ada000 rw-p 00000000 00:00 0 [heap] | |
| 10ada000-136cc000 rw-p 00000000 00:00 0 [heap] | |
| 7ff218000000-7ff218021000 rw-p 00000000 00:00 0 | |
| 7ff218021000-7ff21c000000 ---p 00000000 00:00 0 | |
| 7ff21e2ac000-7ff225739000 rw-s 00000000 08:11 59375622 /mnt/cache/SAVUTUS/auto_2014/ttimes_to.bin | |
| 7ff225739000-7ff22cbc6000 rw-s 00000000 08:11 59375620 /mnt/cache/SAVUTUS/auto_2014/ttimes_from.bin | |
| 7ff22cbc6000-7ff234053000 rw-s 00000000 08:11 59375640 /mnt/cache/SAVUTUS/transit_2014/ttimes_to.bin | |
| 7ff234053000-7ff23b4e0000 rw-s 00000000 08:11 59375638 /mnt/cache/SAVUTUS/transit_2014/ttimes_from.bin | |
| 7ff23b4e0000-7ff24296d000 rw-s 00000000 08:11 59375634 /mnt/cache/SAVUTUS/bicycle_2014/ttimes_to.bin | |
| 7ff24296d000-7ff249dfa000 rw-s 00000000 08:11 59375632 /mnt/cache/SAVUTUS/bicycle_2014/ttimes_from.bin | |
| 7ff249dfa000-7ff251287000 rw-s 00000000 08:11 59375628 /mnt/cache/SAVUTUS/pedestrian_2014/ttimes_to.bin | |
| 7ff251287000-7ff258714000 rw-s 00000000 08:11 59375626 /mnt/cache/SAVUTUS/pedestrian_2014/ttimes_from.bin | |
| 7ff258714000-7ff25d5fe000 rw-p 00000000 00:00 0 | |
| 7ff2602e6000-7ff2602e7000 r-xp 00000000 08:01 3543139 /home/osa/.R/library/3.1.0/lmtest/libs/lmtest.so | |
| 7ff2602e7000-7ff2604e7000 ---p 00001000 08:01 3543139 /home/osa/.R/library/3.1.0/lmtest/libs/lmtest.so | |
| 7ff2604e7000-7ff2604e8000 r--p 00001000 08:01 3543139 /home/osa/.R/library/3.1.0/lmtest/libs/lmtest.so | |
| 7ff2604e8000-7ff2604e9000 rw-p 00002000 08:01 3543139 /home/osa/.R/library/3.1.0/lmtest/libs/lmtest.so | |
| 7ff2604e9000-7ff2604ed000 r-xp 00000000 08:01 3543047 /home/osa/.R/library/3.1.0/zoo/libs/zoo.so | |
| 7ff2604ed000-7ff2606ec000 ---p 00004000 08:01 3543047 /home/osa/.R/library/3.1.0/zoo/libs/zoo.so | |
| 7ff2606ec000-7ff2606ed000 r--p 00003000 08:01 3543047 /home/osa/.R/library/3.1.0/zoo/libs/zoo.so | |
| 7ff2606ed000-7ff2606ee000 rw-p 00004000 08:01 3543047 /home/osa/.R/library/3.1.0/zoo/libs/zoo.so | |
| 7ff2606ee000-7ff2606f1000 r-xp 00000000 08:01 787305 /usr/lib/R/library/lattice/libs/lattice.so | |
| 7ff2606f1000-7ff2608f0000 ---p 00003000 08:01 787305 /usr/lib/R/library/lattice/libs/lattice.so | |
| 7ff2608f0000-7ff2608f1000 r--p 00002000 08:01 787305 /usr/lib/R/library/lattice/libs/lattice.so | |
| 7ff2608f1000-7ff2608f2000 rw-p 00003000 08:01 787305 /usr/lib/R/library/lattice/libs/lattice.so | |
| 7ff2608f2000-7ff2608f3000 r-xp 00000000 08:01 3543015 /home/osa/.R/library/3.1.0/statmod/libs/statmod.so | |
| 7ff2608f3000-7ff260af3000 ---p 00001000 08:01 3543015 /home/osa/.R/library/3.1.0/statmod/libs/statmod.so | |
| 7ff260af3000-7ff260af4000 r--p 00001000 08:01 3543015 /home/osa/.R/library/3.1.0/statmod/libs/statmod.so | |
| 7ff260af4000-7ff260af5000 rw-p 00002000 08:01 3543015 /home/osa/.R/library/3.1.0/statmod/libs/statmod.so | |
| 7ff260af5000-7ff260c4b000 r-xp 00000000 08:01 13896480 /usr/lib/x86_64-linux-gnu/libxml2.so.2.8.0 | |
| 7ff260c4b000-7ff260c4c000 ---p 00156000 08:01 13896480 /usr/lib/x86_64-linux-gnu/libxml2.so.2.8.0 | |
| 7ff260c4c000-7ff260c54000 r--p 00156000 08:01 13896480 /usr/lib/x86_64-linux-gnu/libxml2.so.2.8.0 | |
| 7ff260c54000-7ff260c56000 rw-p 0015e000 08:01 13896480 /usr/lib/x86_64-linux-gnu/libxml2.so.2.8.0 | |
| 7ff260c56000-7ff260c57000 rw-p 00000000 00:00 0 | |
| 7ff260c57000-7ff260fef000 r-xp 00000000 08:01 3540929 /home/osa/.R/library/3.1.0/igraph/libs/igraph.so | |
| 7ff260fef000-7ff2611ef000 ---p 00398000 08:01 3540929 /home/osa/.R/library/3.1.0/igraph/libs/igraph.so | |
| 7ff2611ef000-7ff2611f1000 r--p 00398000 08:01 3540929 /home/osa/.R/library/3.1.0/igraph/libs/igraph.so | |
| 7ff2611f1000-7ff2611f9000 rw-p 0039a000 08:01 3540929 /home/osa/.R/library/3.1.0/igraph/libs/igraph.so | |
| 7ff2611f9000-7ff26120a000 rw-p 00000000 00:00 0 | |
| 7ff26120a000-7ff261278000 r-xp 00000000 08:01 3540887 /home/osa/.R/library/3.1.0/bigmemory/libs/bigmemory.so | |
| 7ff261278000-7ff261478000 ---p 0006e000 08:01 3540887 /home/osa/.R/library/3.1.0/bigmemory/libs/bigmemory.so | |
| 7ff261478000-7ff261479000 r--p 0006e000 08:01 3540887 /home/osa/.R/library/3.1.0/bigmemory/libs/bigmemory.so | |
| 7ff261479000-7ff26147b000 rw-p 0006f000 08:01 3540887 /home/osa/.R/library/3.1.0/bigmemory/libs/bigmemory.so | |
| 7ff26147b000-7ff26147d000 r-xp 00000000 08:01 13911160 /usr/lib/x86_64-linux-gnu/gconv/CP1252.so | |
| 7ff26147d000-7ff26167c000 ---p 00002000 08:01 13911160 /usr/lib/x86_64-linux-gnu/gconv/CP1252.so | |
| 7ff26167c000-7ff26167d000 r--p 00001000 08:01 13911160 /usr/lib/x86_64-linux-gnu/gconv/CP1252.so | |
| 7ff26167d000-7ff26167e000 rw-p 00002000 08:01 13911160 /usr/lib/x86_64-linux-gnu/gconv/CP1252.so | |
| 7ff26167e000-7ff26167f000 rw-p 00000000 00:00 0 | |
| 7ff26167f000-7ff26182f000 r-xp 00000000 08:01 3540330 /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so | |
| 7ff26182f000-7ff261a2f000 ---p 001b0000 08:01 3540330 /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so | |
| 7ff261a2f000-7ff261a3a000 r--p 001b0000 08:01 3540330 /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so | |
| 7ff261a3a000-7ff261a3f000 rw-p 001bb000 08:01 3540330 /home/osa/.R/library/3.1.0/dplyr/libs/dplyr.so | |
| 7ff261a3f000-7ff261a41000 rw-p 00000000 00:00 0 | |
| 7ff261a41000-7ff261a55000 r-xp 00000000 08:01 788951 /usr/lib/R/library/tools/libs/tools.so | |
| 7ff261a55000-7ff261c55000 ---p 00014000 08:01 788951 /usr/lib/R/library/tools/libs/tools.so | |
| 7ff261c55000-7ff261c56000 r--p 00014000 08:01 788951 /usr/lib/R/library/tools/libs/tools.so | |
| 7ff261c56000-7ff261c57000 rw-p 00015000 08:01 788951 /usr/lib/R/library/tools/libs/tools.so | |
| 7ff261c57000-7ff261c5c000 r-xp 00000000 08:01 787108 /usr/lib/R/library/MASS/libs/MASS.so | |
| 7ff261c5c000-7ff261e5b000 ---p 00005000 08:01 787108 /usr/lib/R/library/MASS/libs/MASS.so | |
| 7ff261e5b000-7ff261e5c000 r--p 00004000 08:01 787108 /usr/lib/R/library/MASS/libs/MASS.so | |
| 7ff261e5c000-7ff261e5d000 rw-p 00005000 08:01 787108 /usr/lib/R/library/MASS/libs/MASS.so | |
| 7ff261e5d000-7ff261e68000 r-xp 00000000 08:01 3410230 /home/osa/.R/library/3.1.0/colorspace/libs/colorspace.so | |
| 7ff261e68000-7ff262067000 ---p 0000b000 08:01 3410230 /home/osa/.R/library/3.1.0/colorspace/libs/colorspace.so | |
| 7ff262067000-7ff262068000 r--p 0000a000 08:01 3410230 /home/osa/.R/library/3.1.0/colorspace/libs/colorspace.so | |
| 7ff262068000-7ff262069000 rw-p 0000b000 08:01 3410230 /home/osa/.R/library/3.1.0/colorspace/libs/colorspace.so | |
| 7ff262069000-7ff262078000 r-xp 00000000 08:01 3539126 /home/osa/.R/library/3.1.0/reshape2/libs/reshape2.so | |
| 7ff262078000-7ff262277000 ---p 0000f000 08:01 3539126 /home/osa/.R/library/3.1.0/reshape2/libs/reshape2.so | |
| 7ff262277000-7ff262278000 r--p 0000e000 08:01 3539126 /home/osa/.R/library/3.1.0/reshape2/libs/reshape2.so | |
| 7ff262278000-7ff262279000 rw-p 0000f000 08:01 3539126 /home/osa/.R/library/3.1.0/reshape2/libs/reshape2.so | |
| 7ff262279000-7ff262361000 r-xp 00000000 08:01 13897509 /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.17 | |
| 7ff262361000-7ff262561000 ---p 000e8000 08:01 13897509 /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.17 | |
| 7ff262561000-7ff262569000 r--p 000e8000 08:01 13897509 /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.17 | |
| 7ff262569000-7ff26256b000 rw-p 000f0000 08:01 13897509 /usr/lib/x86_64-linux-gnu/libstdc++.so.6.0.17 | |
| 7ff26256b000-7ff262580000 rw-p 00000000 00:00 0 | |
| 7ff262580000-7ff2625cd000 r-xp 00000000 08:01 3539182 /home/osa/.R/library/3.1.0/Rcpp/libs/Rcpp.so | |
| 7ff2625cd000-7ff2627cc000 ---p 0004d000 08:01 3539182 /home/osa/.R/library/3.1.0/Rcpp/libs/Rcpp.so | |
| 7ff2627cc000-7ff2627ce000 r--p 0004c000 08:01 3539182 /home/osa/.R/library/3.1.0/Rcpp/libs/Rcpp.so | |
| 7ff2627ce000-7ff2627d0000 rw-p 0004e000 08:01 3539182 /home/osa/.R/library/3.1.0/Rcpp/libs/Rcpp.so | |
| 7ff2627d0000-7ff2627d7000 rw-p 00000000 00:00 0 | |
| 7ff2627d7000-7ff2627f4000 r-xp 00000000 08:01 788509 /usr/lib/R/library/grid/libs/grid.so | |
| 7ff2627f4000-7ff2629f3000 ---p 0001d000 08:01 788509 /usr/lib/R/library/grid/libs/grid.so | |
| 7ff2629f3000-7ff2629f4000 r--p 0001c000 08:01 788509 /usr/lib/R/library/grid/libs/grid.so | |
| 7ff2629f4000-7ff2629f5000 rw-p 0001d000 08:01 788509 /usr/lib/R/library/grid/libs/grid.so | |
| 7ff2629f5000-7ff262a0e000 r-xp 00000000 08:01 2495250 /home/osa/.R/library/3.1.0/digest/libs/digest.so | |
| 7ff262a0e000-7ff262c0d000 ---p 00019000 08:01 2495250 /home/osa/.R/library/3.1.0/digest/libs/digest.so | |
| 7ff262c0d000-7ff262c0e000 r--p 00018000 08:01 2495250 /home/osa/.R/library/3.1.0/digest/libs/digest.so | |
| 7ff262c0e000-7ff262c0f000 rw-p 00019000 08:01 2495250 /home/osa/.R/library/3.1.0/digest/libs/digest.so | |
| 7ff262c0f000-7ff262c11000 rw-p 00000000 00:00 0 | |
| 7ff262c11000-7ff2635df000 r-xp 00000000 08:01 533656 /usr/lib/lapack/liblapack.so.3.0 | |
| 7ff2635df000-7ff2637de000 ---p 009ce000 08:01 533656 /usr/lib/lapack/liblapack.so.3.0 | |
| 7ff2637de000-7ff2637e2000 rw-p 009cd000 08:01 533656 /usr/lib/lapack/liblapack.so.3.0 | |
| 7ff2637e2000-7ff263882000 r-xp 00000000 08:01 788446 /usr/lib/R/library/stats/libs/stats.so | |
| 7ff263882000-7ff263a82000 ---p 000a0000 08:01 788446 /usr/lib/R/library/stats/libs/stats.so | |
| 7ff263a82000-7ff263a84000 r--p 000a0000 08:01 788446 /usr/lib/R/library/stats/libs/stats.so | |
| 7ff263a84000-7ff263a86000 rw-p 000a2000 08:01 788446 /usr/lib/R/library/stats/libs/stats.so | |
| 7ff263a86000-7ff263ac4000 r-xp 00000000 08:01 788013 /usr/lib/R/library/graphics/libs/graphics.so | |
| 7ff263ac4000-7ff263cc4000 ---p 0003e000 08:01 788013 /usr/lib/R/library/graphics/libs/graphics.so | |
| 7ff263cc4000-7ff263cc5000 r--p 0003e000 08:01 788013 /usr/lib/R/library/graphics/libs/graphics.so |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment