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@oweidner
Created January 13, 2012 03:37
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Submitting BFAST via Condor on OSG
universe=vanilla
executable=/home/oweidner/software/bfast/bin/bfast
transfer_executable=True
when_to_transfer_output = ON_EXIT
transfer_input_files=/home/oweidner/software/bfast/data/small/reference/hg_2122.fa,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.10.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.1.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.2.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.3.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.4.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.5.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.6.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.7.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.8.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.9.1.bif,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.cs.brg,/home/oweidner/software/bfast/data/small/reference/hg_2122.fa.nt.brg,/home/oweidner/software/bfast/data/small/reads_5K/reads.10.fastq
Arguments = match -r reads.10.fastq -A 1 -f hg_2122.fa
+Owner=Undefined
log=my_log.file
output=my_out.$(Cluster).$(Process)
error=my_err.$(Cluster).$(Process)
notification=Never
queue
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