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ADP in water SSAGES - Gromacs example
:-) GROMACS - ssages, VERSION 5.1.3-dev-20160713-01db2c5752-dirty (-:
GROMACS is written by:
Emile Apol Rossen Apostolov Herman J.C. Berendsen Par Bjelkmar
Aldert van Buuren Rudi van Drunen Anton Feenstra Sebastian Fritsch
Gerrit Groenhof Christoph Junghans Anca Hamuraru Vincent Hindriksen
Dimitrios Karkoulis Peter Kasson Jiri Kraus Carsten Kutzner
Per Larsson Justin A. Lemkul Magnus Lundborg Pieter Meulenhoff
Erik Marklund Teemu Murtola Szilard Pall Sander Pronk
Roland Schulz Alexey Shvetsov Michael Shirts Alfons Sijbers
Peter Tieleman Teemu Virolainen Christian Wennberg Maarten Wolf
and the project leaders:
Mark Abraham, Berk Hess, Erik Lindahl, and David van der Spoel
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2015, The GROMACS development team at
Uppsala University, Stockholm University and
the Royal Institute of Technology, Sweden.
check out http://www.gromacs.org for more information.
GROMACS is free software; you can redistribute it and/or modify it
under the terms of the GNU Lesser General Public License
as published by the Free Software Foundation; either version 2.1
of the License, or (at your option) any later version.
GROMACS: ssages, VERSION 5.1.3-dev-20160713-01db2c5752-dirty
Executable: ssages
Data prefix: /tmp/SSAGES/build/hooks/gromacs/gromacs
Command line:
ssages -v -deffnm adp -dlb yes
Running on 1 node with total 8 cores, 8 logical cores
Hardware detected on host pop-os (the node of MPI rank 0):
CPU info:
Vendor: GenuineIntel
Brand: Intel(R) Core(TM) i7-9700K CPU @ 3.60GHz
SIMD instructions most likely to fit this hardware: AVX2_256
SIMD instructions selected at GROMACS compile time: AVX2_256
Reading file adp.tpr, VERSION 5.1.3-dev-20160713-01db2c5752-dirty (single precision)
Using 4 MPI processes
Using 2 OpenMP threads per MPI process
starting mdrun 'ADP in water'
10000000 steps, 10000.0 ps.
step 0
vol 1.00 imb F 4% step 100, will finish Tue Jun 9 05:03:16 2020
vol 0.98 imb F 3% step 200, will finish Tue Jun 9 04:48:47 2020
vol 0.97 imb F 5% step 300, will finish Tue Jun 9 04:47:43 2020
vol 0.94 imb F 5% step 400, will finish Tue Jun 9 05:51:39 2020
vol 0.95 imb F 1% step 500, will finish Tue Jun 9 05:34:24 2020
vol 0.95 imb F 2% step 600, will finish Tue Jun 9 05:32:36 2020
vol 0.95 imb F 2% step 700, will finish Tue Jun 9 05:27:49 2020
vol 0.96 imb F 1% step 800, will finish Tue Jun 9 05:24:48 2020
vol 0.97 imb F 3% step 900, will finish Tue Jun 9 05:21:33 2020
vol 0.97 imb F 2% step 1000, will finish Tue Jun 9 05:17:43 2020
vol 0.99 imb F 3% step 1100, will finish Tue Jun 9 05:13:01 2020
vol 0.97 imb F 2% step 1200, will finish Tue Jun 9 05:09:11 2020
vol 0.97 imb F 1% step 1300, will finish Tue Jun 9 05:05:17 2020
vol 0.97 imb F 1% step 1400, will finish Tue Jun 9 05:03:05 2020
vol 0.98 imb F 1% step 1500, will finish Tue Jun 9 05:00:29 2020
vol 0.98 imb F 2% step 1600, will finish Tue Jun 9 04:58:47 2020
vol 0.98 imb F 1% step 1700, will finish Tue Jun 9 04:58:12 2020
vol 0.98 imb F 1% step 1800, will finish Tue Jun 9 04:56:26 2020
vol 0.99 imb F 1% step 1900, will finish Tue Jun 9 04:54:50 2020
vol 0.99 imb F 2% step 2000, will finish Tue Jun 9 04:54:38 2020
vol 0.98 imb F 2% step 2100, will finish Tue Jun 9 04:53:53 2020
vol 0.99 imb F 1% step 2200, will finish Tue Jun 9 04:53:59 2020
vol 0.98 imb F 3% step 2300, will finish Tue Jun 9 04:52:37 2020
vol 0.97 imb F 1% step 2400, will finish Tue Jun 9 04:53:03 2020
vol 0.97 imb F 1% step 2500, will finish Tue Jun 9 04:51:57 2020
vol 0.97 imb F 1% step 2600, will finish Tue Jun 9 04:52:37 2020
vol 0.97 imb F 2% step 2700, will finish Tue Jun 9 04:51:50 2020
vol 0.97 imb F 1% step 2800, will finish Tue Jun 9 04:52:39 2020
vol 0.98 imb F 2% step 2900, will finish Tue Jun 9 04:52:00 2020
vol 0.97 imb F 2% step 3000, will finish Tue Jun 9 04:51:18 2020
vol 0.97 imb F 2% step 3100, will finish Tue Jun 9 04:50:33 2020
vol 0.97 imb F 1% step 3200, will finish Tue Jun 9 04:50:11 2020
vol 0.98 imb F 2% step 3300, will finish Tue Jun 9 04:49:20 2020
vol 0.97 imb F 2% step 3400, will finish Tue Jun 9 04:48:47 2020
vol 0.97 imb F 2% step 3500, will finish Tue Jun 9 04:47:55 2020
vol 0.97 imb F 2% step 3600, will finish Tue Jun 9 04:47:55 2020
vol 0.97 imb F 2% step 3700, will finish Tue Jun 9 04:47:26 2020
vol 0.97 imb F 3% step 3800, will finish Tue Jun 9 04:47:17 2020
vol 0.98 imb F 1% step 3900, will finish Tue Jun 9 04:46:34 2020
vol 0.98 imb F 2% step 4000, will finish Tue Jun 9 04:46:28 2020
vol 0.98 imb F 5% step 4100, will finish Tue Jun 9 04:46:09 2020
vol 0.98 imb F 2% step 4200, will finish Tue Jun 9 04:45:45 2020
vol 0.97 imb F 2% step 4300, will finish Tue Jun 9 04:45:28 2020
vol 0.98 imb F 1% step 4400, will finish Tue Jun 9 04:45:00 2020
vol 0.99 imb F 2% step 4500, will finish Tue Jun 9 04:44:34 2020
vol 0.99 imb F 3% step 4600, will finish Tue Jun 9 04:44:21 2020
vol 0.98 imb F 1% step 4700, will finish Tue Jun 9 04:44:42 2020
vol 0.99 imb F 1% step 4800, will finish Tue Jun 9 04:44:17 2020
vol 0.99 imb F 2% step 4900, will finish Tue Jun 9 04:43:55 2020
vol 0.99 imb F 2% step 5000, will finish Tue Jun 9 04:44:14 2020
vol 0.98 imb F 2% step 5100, will finish Tue Jun 9 04:43:54 2020
vol 0.98 imb F 2% step 5200, will finish Tue Jun 9 04:43:39 2020
vol 0.99 imb F 2% step 5300, will finish Tue Jun 9 04:43:12 2020
vol 0.99 imb F 2% step 5400, will finish Tue Jun 9 04:42:48 2020
vol 0.98 imb F 2% step 5500, will finish Tue Jun 9 04:42:38 2020
vol 0.99 imb F 3% step 5600, will finish Tue Jun 9 04:42:33 2020
vol 0.99 imb F 2% step 5700, will finish Tue Jun 9 04:42:13 2020
vol 0.99 imb F 2% step 5800, will finish Tue Jun 9 04:41:47 2020
vol 0.98 imb F 1% step 5900, will finish Tue Jun 9 04:41:34 2020
vol 0.99 imb F 2% step 6000, will finish Tue Jun 9 04:41:13 2020
vol 0.98 imb F 1% step 6100, will finish Tue Jun 9 04:40:50 2020
vol 0.98 imb F 2% step 6200, will finish Tue Jun 9 04:40:40 2020
vol 0.98 imb F 3% step 6300, will finish Tue Jun 9 04:40:28 2020
vol 0.99 imb F 1% step 6400, will finish Tue Jun 9 04:40:23 2020
vol 0.98 imb F 2% step 6500, will finish Tue Jun 9 04:40:37 2020
vol 0.98 imb F 2% step 6600, will finish Tue Jun 9 04:40:33 2020
vol 0.98 imb F 2% step 6700, will finish Tue Jun 9 04:40:34 2020
vol 0.98 imb F 1% step 6800, will finish Tue Jun 9 04:40:26 2020
vol 0.98 imb F 1% step 6900, will finish Tue Jun 9 04:40:15 2020
vol 0.98 imb F 2% step 7000, will finish Tue Jun 9 04:40:03 2020
vol 0.97 imb F 2% step 7100, will finish Tue Jun 9 04:40:02 2020
vol 0.96 imb F 3% step 7200, will finish Tue Jun 9 04:39:53 2020
vol 0.95 imb F 2% step 7300, will finish Tue Jun 9 04:40:11 2020
vol 0.97 imb F 2% step 7400, will finish Tue Jun 9 04:40:02 2020
vol 0.99 imb F 3% step 7500, will finish Tue Jun 9 04:39:57 2020
vol 0.99 imb F 1% step 7600, will finish Tue Jun 9 04:39:47 2020
vol 0.99 imb F 3% step 7700, will finish Tue Jun 9 04:39:51 2020
vol 1.00 imb F 2% step 7800, will finish Tue Jun 9 04:39:42 2020
vol 0.99 imb F 1% step 7900, will finish Tue Jun 9 04:39:49 2020
vol 0.99 imb F 3% step 8000, will finish Tue Jun 9 04:39:43 2020
vol 0.98 imb F 9% step 8100, will finish Tue Jun 9 04:40:50 2020
vol 0.97 imb F 4% step 8200, will finish Tue Jun 9 04:41:08 2020
vol 0.98 imb F 0% step 8300, will finish Tue Jun 9 04:41:40 2020
vol 0.98 imb F 2% step 8400, will finish Tue Jun 9 04:41:49 2020
vol 0.98 imb F 2% step 8500, will finish Tue Jun 9 04:41:48 2020
vol 0.99 imb F 1% step 8600, will finish Tue Jun 9 04:41:48 2020
vol 0.99 imb F 2% step 8700, will finish Tue Jun 9 04:42:11 2020
vol 0.99 imb F 1% step 8800, will finish Tue Jun 9 04:42:05 2020
vol 0.99 imb F 1% step 8900, will finish Tue Jun 9 04:41:58 2020
vol 0.99 imb F 1% step 9000, will finish Tue Jun 9 04:41:54 2020
vol 0.98 imb F 2% step 9100, will finish Tue Jun 9 04:42:03 2020
vol 0.99 imb F 2% step 9200, will finish Tue Jun 9 04:41:56 2020
vol 0.98 imb F 4% step 9300, will finish Tue Jun 9 04:42:14 2020
vol 0.96 imb F 1% step 9400, will finish Tue Jun 9 04:42:05 2020
vol 0.97 imb F 4% step 9500, will finish Tue Jun 9 04:42:16 2020
vol 0.98 imb F 2% step 9600, will finish Tue Jun 9 04:42:10 2020
vol 0.98 imb F 2% step 9700, will finish Tue Jun 9 04:42:04 2020
vol 0.99 imb F 1% step 9800, will finish Tue Jun 9 04:42:47 2020
vol 0.98 imb F 2% step 9900, will finish Tue Jun 9 04:42:43 2020
vol 0.99 imb F 0% iter: 0 mse: 42.057 gamma: 149 mu: 0.005 grad: 115.527
iter: 1 mse: 27.5633 gamma: 12.5869 mu: 0.0005 grad: 130.543
iter: 2 mse: 18.6625 gamma: 12.5545 mu: 0.5 grad: 88.3943
iter: 3 mse: 11.1972 gamma: 19.6998 mu: 0.05 grad: 83.4922
iter: 4 mse: 11.0971 gamma: 13.2007 mu: 0.05 grad: 64.3858
iter: 5 mse: 7.72282 gamma: 15.5741 mu: 5 grad: 50.4076
iter: 6 mse: 7.20402 gamma: 15.1938 mu: 0.5 grad: 16.2738
iter: 7 mse: 4.77258 gamma: 17.4103 mu: 50 grad: 12.5105
iter: 8 mse: 3.65335 gamma: 18.6404 mu: 5 grad: 13.6237
iter: 9 mse: 2.83195 gamma: 20.0653 mu: 5 grad: 2.11674
iter: 10 mse: 2.41071 gamma: 21.5443 mu: 5 grad: 1.14059
iter: 11 mse: 2.13696 gamma: 22.4103 mu: 5 grad: 2.1907
iter: 12 mse: 1.94098 gamma: 23.4103 mu: 5 grad: 1.86886
iter: 13 mse: 1.77457 gamma: 24.4182 mu: 5 grad: 1.51274
iter: 14 mse: 1.63286 gamma: 25.6844 mu: 5 grad: 0.812956
iter: 15 mse: 1.46677 gamma: 26.9308 mu: 0.5 grad: 2.77472
iter: 16 mse: 1.41771 gamma: 31.8062 mu: 0.5 grad: 4.30031
iter: 17 mse: 1.34976 gamma: 32.6148 mu: 0.5 grad: 6.76025
iter: 18 mse: 1.2985 gamma: 36.0303 mu: 0.5 grad: 3.66443
iter: 19 mse: 1.27288 gamma: 39.4241 mu: 0.5 grad: 4.64029
iter: 20 mse: 1.22364 gamma: 42.6606 mu: 0.5 grad: 9.19263
iter: 21 mse: 1.13305 gamma: 43.6203 mu: 5 grad: 1.56574
iter: 22 mse: 1.10455 gamma: 44.369 mu: 5 grad: 1.03937
iter: 23 mse: 1.0006 gamma: 45.0603 mu: 0.5 grad: 2.83973
iter: 24 mse: 0.910122 gamma: 48.4369 mu: 5 grad: 5.0874
iter: 25 mse: 0.816313 gamma: 49.3876 mu: 5 grad: 0.787126
iter: 26 mse: 0.763746 gamma: 51.369 mu: 5 grad: 0.952775
iter: 27 mse: 0.725908 gamma: 52.8567 mu: 5 grad: 2.47231
iter: 28 mse: 0.686628 gamma: 54.1674 mu: 5 grad: 0.817382
iter: 29 mse: 0.657692 gamma: 55.4303 mu: 5 grad: 2.61855
iter: 30 mse: 0.627752 gamma: 56.4358 mu: 5 grad: 2.22417
iter: 31 mse: 0.603005 gamma: 57.3623 mu: 5 grad: 2.88862
iter: 32 mse: 0.578855 gamma: 58.0762 mu: 5 grad: 2.77841
iter: 33 mse: 0.557516 gamma: 58.6301 mu: 5 grad: 2.49988
iter: 34 mse: 0.538497 gamma: 59.0126 mu: 5 grad: 2.04005
iter: 35 mse: 0.520974 gamma: 59.3155 mu: 5 grad: 1.63642
iter: 36 mse: 0.503711 gamma: 59.6683 mu: 5 grad: 1.27599
iter: 37 mse: 0.486436 gamma: 60.2099 mu: 5 grad: 0.93493
iter: 38 mse: 0.470261 gamma: 60.9094 mu: 5 grad: 0.733455
iter: 39 mse: 0.456462 gamma: 61.6164 mu: 5 grad: 0.690236
iter: 40 mse: 0.445062 gamma: 62.2893 mu: 5 grad: 0.6753
iter: 41 mse: 0.435063 gamma: 62.9617 mu: 5 grad: 0.591773
iter: 42 mse: 0.425628 gamma: 63.6955 mu: 5 grad: 0.457423
iter: 43 mse: 0.416237 gamma: 64.5319 mu: 5 grad: 0.335594
iter: 44 mse: 0.406546 gamma: 65.454 mu: 5 grad: 0.278878
iter: 45 mse: 0.396473 gamma: 66.3754 mu: 5 grad: 0.269588
iter: 46 mse: 0.386404 gamma: 67.212 mu: 5 grad: 0.345924
iter: 47 mse: 0.376931 gamma: 67.9359 mu: 5 grad: 0.304837
iter: 48 mse: 0.368478 gamma: 68.5442 mu: 5 grad: 0.2438
iter: 49 mse: 0.361008 gamma: 69.0364 mu: 5 grad: 0.355242
iter: 50 mse: 0.354233 gamma: 69.4318 mu: 5 grad: 0.5251
iter: 51 mse: 0.347932 gamma: 69.7589 mu: 5 grad: 0.674157
iter: 52 mse: 0.341958 gamma: 70.0398 mu: 5 grad: 0.781493
iter: 53 mse: 0.336179 gamma: 70.2849 mu: 5 grad: 0.834699
iter: 54 mse: 0.330439 gamma: 70.4833 mu: 5 grad: 0.827217
iter: 55 mse: 0.32453 gamma: 70.6162 mu: 5 grad: 0.771813
iter: 56 mse: 0.318192 gamma: 70.6928 mu: 5 grad: 0.690898
iter: 57 mse: 0.311234 gamma: 70.7925 mu: 5 grad: 0.612246
iter: 58 mse: 0.30374 gamma: 71.0404 mu: 5 grad: 0.574815
iter: 59 mse: 0.296049 gamma: 71.496 mu: 5 grad: 0.586645
iter: 60 mse: 0.288433 gamma: 72.1477 mu: 5 grad: 0.584273
iter: 61 mse: 0.281001 gamma: 72.9557 mu: 5 grad: 0.524733
iter: 62 mse: 0.273813 gamma: 73.8713 mu: 5 grad: 0.434399
iter: 63 mse: 0.26692 gamma: 74.8609 mu: 5 grad: 0.345737
iter: 64 mse: 0.260406 gamma: 75.9057 mu: 5 grad: 0.262651
iter: 65 mse: 0.254397 gamma: 76.958 mu: 5 grad: 0.175466
iter: 66 mse: 0.248972 gamma: 77.9166 mu: 5 grad: 0.102489
iter: 67 mse: 0.244079 gamma: 78.712 mu: 5 grad: 0.0831765
iter: 68 mse: 0.241229 gamma: 79.4171 mu: 0.5 grad: 4.14997
iter: 69 mse: 0.217099 gamma: 80.3054 mu: 5 grad: 0.709313
iter: 70 mse: 0.206476 gamma: 81.32 mu: 0.5 grad: 2.28201
iter: 71 mse: 0.201913 gamma: 82.1471 mu: 0.5 grad: 3.85848
iter: 72 mse: 0.183437 gamma: 82.9319 mu: 5 grad: 0.701338
iter: 73 mse: 0.181149 gamma: 83.9036 mu: 5 grad: 0.0629249
iter: 74 mse: 0.179547 gamma: 84.1153 mu: 5 grad: 0.0833153
iter: 75 mse: 0.178108 gamma: 84.3305 mu: 5 grad: 0.0558257
iter: 76 mse: 0.176778 gamma: 84.5082 mu: 5 grad: 0.055285
iter: 77 mse: 0.175535 gamma: 84.6614 mu: 5 grad: 0.056631
iter: 78 mse: 0.174365 gamma: 84.8008 mu: 5 grad: 0.0593187
iter: 79 mse: 0.173259 gamma: 84.9325 mu: 5 grad: 0.0619314
iter: 80 mse: 0.172211 gamma: 85.0623 mu: 5 grad: 0.0639041
iter: 81 mse: 0.171217 gamma: 85.1946 mu: 5 grad: 0.065046
iter: 82 mse: 0.170273 gamma: 85.3326 mu: 5 grad: 0.0652409
iter: 83 mse: 0.169374 gamma: 85.4789 mu: 5 grad: 0.0644897
iter: 84 mse: 0.168516 gamma: 85.6351 mu: 5 grad: 0.0628527
iter: 85 mse: 0.167697 gamma: 85.802 mu: 5 grad: 0.0604538
iter: 86 mse: 0.166911 gamma: 85.9797 mu: 5 grad: 0.0574692
iter: 87 mse: 0.166155 gamma: 86.1682 mu: 5 grad: 0.0541307
iter: 88 mse: 0.165424 gamma: 86.3674 mu: 5 grad: 0.0507621
iter: 89 mse: 0.164715 gamma: 86.5774 mu: 5 grad: 0.0478919
iter: 90 mse: 0.164024 gamma: 86.7979 mu: 5 grad: 0.0464252
iter: 91 mse: 0.163349 gamma: 87.0272 mu: 5 grad: 0.0473701
iter: 92 mse: 0.16269 gamma: 87.2607 mu: 5 grad: 0.0499236
iter: 93 mse: 0.162053 gamma: 87.4895 mu: 5 grad: 0.0496977
iter: 94 mse: 0.161444 gamma: 87.7 mu: 5 grad: 0.0439825
iter: 95 mse: 0.160862 gamma: 87.8802 mu: 5 grad: 0.0383653
iter: 96 mse: 0.160301 gamma: 88.0287 mu: 5 grad: 0.037968
iter: 97 mse: 0.159754 gamma: 88.1532 mu: 5 grad: 0.0410399
iter: 98 mse: 0.159217 gamma: 88.2639 mu: 5 grad: 0.0454366
iter: 99 mse: 0.158685 gamma: 88.3695 mu: 5 grad: 0.0505098
iter: 100 mse: 0.158157 gamma: 88.4761 mu: 5 grad: 0.0561576
iter: 101 mse: 0.15763 gamma: 88.588 mu: 5 grad: 0.0623782
iter: 102 mse: 0.157104 gamma: 88.7082 mu: 5 grad: 0.0691335
iter: 103 mse: 0.156577 gamma: 88.8384 mu: 5 grad: 0.0763
iter: 104 mse: 0.156047 gamma: 88.9801 mu: 5 grad: 0.083649
iter: 105 mse: 0.155515 gamma: 89.1342 mu: 5 grad: 0.0908414
iter: 106 mse: 0.15498 gamma: 89.3012 mu: 5 grad: 0.0974315
iter: 107 mse: 0.15444 gamma: 89.4813 mu: 5 grad: 0.102884
iter: 108 mse: 0.153897 gamma: 89.6744 mu: 5 grad: 0.106608
iter: 109 mse: 0.15335 gamma: 89.88 mu: 5 grad: 0.108024
iter: 110 mse: 0.152802 gamma: 90.0973 mu: 5 grad: 0.106657
iter: 111 mse: 0.152253 gamma: 90.3248 mu: 5 grad: 0.102283
iter: 112 mse: 0.151707 gamma: 90.5605 mu: 5 grad: 0.0950749
iter: 113 mse: 0.151165 gamma: 90.8019 mu: 5 grad: 0.0857086
iter: 114 mse: 0.15063 gamma: 91.0457 mu: 5 grad: 0.0753358
iter: 115 mse: 0.149488 gamma: 92.0851 mu: 0.5 grad: 2.11752
iter: 116 mse: 0.147561 gamma: 93.3415 mu: 0.5 grad: 3.15074
iter: 117 mse: 0.14337 gamma: 93.8936 mu: 5 grad: 0.0712826
iter: 118 mse: 0.142933 gamma: 94.322 mu: 5 grad: 0.0903048
iter: 119 mse: 0.142502 gamma: 94.542 mu: 5 grad: 0.0871309
iter: 120 mse: 0.142074 gamma: 94.764 mu: 5 grad: 0.0865777
iter: 121 mse: 0.141646 gamma: 94.9728 mu: 5 grad: 0.0845913
iter: 122 mse: 0.141218 gamma: 95.1723 mu: 5 grad: 0.0825214
iter: 123 mse: 0.140788 gamma: 95.3631 mu: 5 grad: 0.0804859
iter: 124 mse: 0.140357 gamma: 95.5456 mu: 5 grad: 0.0786441
iter: 125 mse: 0.139922 gamma: 95.7197 mu: 5 grad: 0.0770623
iter: 126 mse: 0.139484 gamma: 95.8851 mu: 5 grad: 0.0757806
iter: 127 mse: 0.139041 gamma: 96.0416 mu: 5 grad: 0.0748177
iter: 128 mse: 0.138593 gamma: 96.189 mu: 5 grad: 0.0741783
iter: 129 mse: 0.138138 gamma: 96.3274 mu: 5 grad: 0.0738562
iter: 130 mse: 0.137675 gamma: 96.4569 mu: 5 grad: 0.0738367
iter: 131 mse: 0.137204 gamma: 96.578 mu: 5 grad: 0.0740983
iter: 132 mse: 0.136723 gamma: 96.6911 mu: 5 grad: 0.0746126
iter: 133 mse: 0.13623 gamma: 96.7969 mu: 5 grad: 0.0753444
iter: 134 mse: 0.135725 gamma: 96.8963 mu: 5 grad: 0.0762502
iter: 135 mse: 0.135206 gamma: 96.9901 mu: 5 grad: 0.0772762
iter: 136 mse: 0.134672 gamma: 97.0792 mu: 5 grad: 0.0783566
iter: 137 mse: 0.134123 gamma: 97.1645 mu: 5 grad: 0.0794123
iter: 138 mse: 0.133556 gamma: 97.2467 mu: 5 grad: 0.0803505
iter: 139 mse: 0.132973 gamma: 97.3266 mu: 5 grad: 0.0810671
iter: 140 mse: 0.132371 gamma: 97.4047 mu: 5 grad: 0.0814516
iter: 141 mse: 0.131751 gamma: 97.4813 mu: 5 grad: 0.0813968
iter: 142 mse: 0.131113 gamma: 97.5567 mu: 5 grad: 0.0808106
iter: 143 mse: 0.130457 gamma: 97.6309 mu: 5 grad: 0.0796314
iter: 144 mse: 0.129782 gamma: 97.7039 mu: 5 grad: 0.0778422
iter: 145 mse: 0.129087 gamma: 97.7753 mu: 5 grad: 0.0754812
iter: 146 mse: 0.128373 gamma: 97.8451 mu: 5 grad: 0.0726455
iter: 147 mse: 0.127639 gamma: 97.9131 mu: 5 grad: 0.0694856
iter: 148 mse: 0.126884 gamma: 97.9793 mu: 5 grad: 0.0661908
iter: 149 mse: 0.126107 gamma: 98.0438 mu: 5 grad: 0.0629658
iter: 150 mse: 0.125307 gamma: 98.1068 mu: 5 grad: 0.0600045
iter: 151 mse: 0.124483 gamma: 98.1686 mu: 5 grad: 0.057463
iter: 152 mse: 0.123634 gamma: 98.2295 mu: 5 grad: 0.0554403
iter: 153 mse: 0.122761 gamma: 98.2902 mu: 5 grad: 0.0539691
iter: 154 mse: 0.121864 gamma: 98.3508 mu: 5 grad: 0.0530191
iter: 155 mse: 0.120942 gamma: 98.4119 mu: 5 grad: 0.0525082
iter: 156 mse: 0.119996 gamma: 98.4735 mu: 5 grad: 0.0523151
iter: 157 mse: 0.119029 gamma: 98.5359 mu: 5 grad: 0.052289
iter: 158 mse: 0.118041 gamma: 98.5989 mu: 5 grad: 0.0522568
iter: 159 mse: 0.117034 gamma: 98.6624 mu: 5 grad: 0.0520322
iter: 160 mse: 0.11561 gamma: 97.7451 mu: 0.5 grad: 2.29577
iter: 161 mse: 0.106417 gamma: 97.7921 mu: 0.5 grad: 2.322
iter: 162 mse: 0.100864 gamma: 98.0117 mu: 0.5 grad: 2.24776
iter: 163 mse: 0.0965594 gamma: 98.5033 mu: 0.5 grad: 2.37915
iter: 164 mse: 0.0928785 gamma: 99.1332 mu: 0.5 grad: 3.40008
iter: 165 mse: 0.0879131 gamma: 99.6662 mu: 0.5 grad: 2.71077
iter: 166 mse: 0.0866937 gamma: 100.693 mu: 0.5 grad: 4.47627
iter: 167 mse: 0.080416 gamma: 100.651 mu: 0.5 grad: 3.20155
iter: 168 mse: 0.0739318 gamma: 102.096 mu: 0.5 grad: 1.88577
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iter: 966 mse: 1.64227e-09 gamma: 96.6336 mu: 5000 grad: 4.34179e-06
iter: 967 mse: 1.63911e-09 gamma: 123.542 mu: 5000 grad: 4.57007e-06
iter: 968 mse: 1.63606e-09 gamma: 115.073 mu: 5000 grad: 4.27586e-06
iter: 969 mse: 1.63299e-09 gamma: 111.928 mu: 5000 grad: 4.36879e-06
iter: 970 mse: 1.62991e-09 gamma: 130.529 mu: 5000 grad: 4.40349e-06
iter: 971 mse: 1.62691e-09 gamma: 113.275 mu: 5000 grad: 4.20324e-06
iter: 972 mse: 1.62385e-09 gamma: 116.717 mu: 5000 grad: 4.39038e-06
iter: 973 mse: 1.62081e-09 gamma: 107.483 mu: 5000 grad: 4.35294e-06
iter: 974 mse: 1.61774e-09 gamma: 118.101 mu: 5000 grad: 4.45405e-06
iter: 975 mse: 1.61472e-09 gamma: 107.93 mu: 5000 grad: 4.33829e-06
iter: 976 mse: 1.61166e-09 gamma: 111.492 mu: 5000 grad: 4.44984e-06
iter: 977 mse: 1.60863e-09 gamma: 116.327 mu: 5000 grad: 4.41093e-06
iter: 978 mse: 1.60562e-09 gamma: 114.022 mu: 5000 grad: 4.35871e-06
iter: 979 mse: 1.60261e-09 gamma: 126.015 mu: 5000 grad: 4.3844e-06
iter: 980 mse: 1.59965e-09 gamma: 107.62 mu: 5000 grad: 4.25517e-06
iter: 981 mse: 1.59663e-09 gamma: 68.6177 mu: 5000 grad: 4.45573e-06
iter: 982 mse: 1.59346e-09 gamma: 145.068 mu: 5000 grad: 4.89371e-06
iter: 983 mse: 1.59059e-09 gamma: 111.362 mu: 5000 grad: 4.05233e-06
iter: 984 mse: 1.5876e-09 gamma: 113.597 mu: 5000 grad: 4.41593e-06
iter: 985 mse: 1.58463e-09 gamma: 118.118 mu: 5000 grad: 4.39145e-06
iter: 986 mse: 1.58168e-09 gamma: 115.526 mu: 5000 grad: 4.34262e-06
iter: 987 mse: 1.57873e-09 gamma: 117.742 mu: 5000 grad: 4.3713e-06
iter: 988 mse: 1.57579e-09 gamma: 88.5177 mu: 5000 grad: 4.34756e-06
iter: 989 mse: 1.57275e-09 gamma: 121.438 mu: 5000 grad: 4.67069e-06
iter: 990 mse: 1.56983e-09 gamma: 110.332 mu: 5000 grad: 4.30706e-06
iter: 991 mse: 1.56689e-09 gamma: 86.0622 mu: 5000 grad: 4.4291e-06
iter: 992 mse: 1.56385e-09 gamma: 120.164 mu: 5000 grad: 4.69895e-06
iter: 993 mse: 1.56095e-09 gamma: 118.912 mu: 5000 grad: 4.32154e-06
iter: 994 mse: 1.55806e-09 gamma: 107.191 mu: 5000 grad: 4.3365e-06
iter: 995 mse: 1.55513e-09 gamma: 118.468 mu: 5000 grad: 4.46515e-06
iter: 996 mse: 1.55224e-09 gamma: 111.74 mu: 5000 grad: 4.34201e-06
iter: 997 mse: 1.54934e-09 gamma: 118.427 mu: 5000 grad: 4.41596e-06
iter: 998 mse: 1.54646e-09 gamma: 126.61 mu: 5000 grad: 4.34331e-06
iter: 999 mse: 1.54363e-09 gamma: 92.4331 mu: 5000 grad: 4.25558e-06
iter: 1000 mse: 1.54067e-09 gamma: 122.072 mu: 5000 grad: 4.63114e-06
iter: 1001 mse: 1.53783e-09 gamma: 120.745 mu: 5000 grad: 4.30416e-06
iter: 0 mse: 7747.73 gamma: 149 mu: 0.005 grad: 27634.5
iter: 1 mse: 520.61 gamma: 43.0857 mu: 0.0005 grad: 3530.56
iter: 2 mse: 181.017 gamma: 47.4157 mu: 0.05 grad: 1936.44
iter: 3 mse: 155.853 gamma: 47.6558 mu: 5 grad: 1639.76
iter: 4 mse: 117.601 gamma: 52.273 mu: 5 grad: 371.776
iter: 5 mse: 117.438 gamma: 54.6588 mu: 5 grad: 495.515
iter: 6 mse: 114.341 gamma: 56.1557 mu: 5 grad: 233.728
iter: 7 mse: 112.561 gamma: 56.48 mu: 50 grad: 36.5147
iter: 8 mse: 112.476 gamma: 56.9481 mu: 50 grad: 22.449
iter: 9 mse: 112.43 gamma: 57.255 mu: 50 grad: 21.8198
iter: 10 mse: 112.368 gamma: 57.5701 mu: 50 grad: 19.9366
iter: 11 mse: 112.289 gamma: 57.8875 mu: 50 grad: 18.3891
iter: 12 mse: 112.19 gamma: 58.2185 mu: 50 grad: 17.043
iter: 13 mse: 112.071 gamma: 58.5694 mu: 50 grad: 15.9117
iter: 14 mse: 111.933 gamma: 58.9457 mu: 50 grad: 15.0211
iter: 15 mse: 111.775 gamma: 59.3517 mu: 50 grad: 14.3913
iter: 16 mse: 111.596 gamma: 59.7908 mu: 50 grad: 14.0285
iter: 17 mse: 111.395 gamma: 60.2653 mu: 50 grad: 13.9251
iter: 18 mse: 111.171 gamma: 60.7767 mu: 50 grad: 14.064
iter: 19 mse: 110.921 gamma: 61.3262 mu: 50 grad: 14.4245
iter: 20 mse: 110.73 gamma: 65.6308 mu: 5 grad: 566.452
iter: 21 mse: 105.172 gamma: 70.6441 mu: 5 grad: 276.523
iter: 22 mse: 100.992 gamma: 74.378 mu: 5 grad: 448.593
iter: 23 mse: 96.9094 gamma: 77.3247 mu: 5 grad: 770.99
iter: 24 mse: 92.6118 gamma: 78.2371 mu: 5 grad: 810.732
iter: 25 mse: 89.6191 gamma: 80.039 mu: 5 grad: 1102.98
iter: 26 mse: 76.5564 gamma: 81.6157 mu: 5 grad: 456.007
iter: 27 mse: 72.4677 gamma: 84.4925 mu: 5 grad: 257.92
iter: 28 mse: 69.7036 gamma: 86.4729 mu: 5 grad: 148.411
iter: 29 mse: 67.2763 gamma: 88.0533 mu: 5 grad: 179.964
iter: 30 mse: 65.0528 gamma: 89.282 mu: 5 grad: 217.71
iter: 31 mse: 63.0121 gamma: 90.3877 mu: 5 grad: 227.176
iter: 32 mse: 60.949 gamma: 91.1729 mu: 5 grad: 181.344
iter: 33 mse: 59.0896 gamma: 91.5053 mu: 5 grad: 116.629
iter: 34 mse: 57.6807 gamma: 91.7256 mu: 5 grad: 139.101
iter: 35 mse: 56.6556 gamma: 92.1898 mu: 5 grad: 203.796
iter: 36 mse: 55.7306 gamma: 92.6113 mu: 5 grad: 234.437
iter: 37 mse: 54.837 gamma: 92.8918 mu: 5 grad: 268.831
iter: 38 mse: 53.9261 gamma: 92.8333 mu: 5 grad: 296.346
iter: 39 mse: 52.7456 gamma: 92.4745 mu: 5 grad: 307.191
iter: 40 mse: 51.2598 gamma: 92.1742 mu: 5 grad: 277.781
iter: 41 mse: 50.0948 gamma: 92.1584 mu: 5 grad: 250.237
iter: 42 mse: 49.3922 gamma: 92.4849 mu: 5 grad: 246.583
iter: 43 mse: 49.1605 gamma: 93.1716 mu: 5 grad: 279.212
iter: 44 mse: 48.9983 gamma: 93.9968 mu: 5 grad: 308.348
iter: 45 mse: 48.6709 gamma: 94.7509 mu: 5 grad: 311.387
iter: 46 mse: 48.2922 gamma: 95.4263 mu: 5 grad: 301.812
iter: 47 mse: 47.9278 gamma: 96.0208 mu: 5 grad: 287.993
iter: 48 mse: 47.6006 gamma: 96.5288 mu: 5 grad: 273.945
iter: 49 mse: 47.314 gamma: 96.9267 mu: 5 grad: 261.667
iter: 50 mse: 47.0821 gamma: 97.1912 mu: 5 grad: 254.3
iter: 51 mse: 46.9203 gamma: 97.2826 mu: 5 grad: 251.773
iter: 52 mse: 46.8293 gamma: 97.1651 mu: 5 grad: 249.851
iter: 53 mse: 46.5906 gamma: 97.4321 mu: 5000 grad: 133.268
iter: 54 mse: 46.5904 gamma: 97.4492 mu: 5e+06 grad: 132.153
iter: 55 mse: 46.5902 gamma: 97.4483 mu: 5e+06 grad: 131.089
iter: 56 mse: 46.59 gamma: 97.4487 mu: 5e+06 grad: 130.075
iter: 57 mse: 46.59 gamma: 97.4489 mu: 5e+06 grad: 129.108
iter: 58 mse: 46.59 gamma: 97.4492 mu: 5e+06 grad: 128.187
iter: 59 mse: 46.59 gamma: 97.4492 mu: 5e+10 grad: 128.186
gamma1 120.745 97.4492
Ratio: 0.553384
ssages: /tmp/SSAGES/include/Eigen/src/Core/Assign.h:505: Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, 1>]: Assertion `rows() == other.rows() && cols() == other.cols()' failed.
[pop-os:120136] *** Process received signal ***
[pop-os:120136] Signal: Aborted (6)
[pop-os:120136] Signal code: (-6)
ssages: /tmp/SSAGES/include/Eigen/src/Core/Assign.h:505: Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, 1>]: Assertion `rows() == other.rows() && cols() == other.cols()' failed.
[pop-os:120137] *** Process received signal ***
[pop-os:120137] Signal: Aborted (6)
[pop-os:120137] Signal code: (-6)
ssages: /tmp/SSAGES/include/Eigen/src/Core/Assign.h:505: Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, 1>]: Assertion `rows() == other.rows() && cols() == other.cols()' failed.
[pop-os:120138] *** Process received signal ***
[pop-os:120138] Signal: Aborted (6)
[pop-os:120138] Signal code: (-6)
ssages: /tmp/SSAGES/include/Eigen/src/Core/Assign.h:505: Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<double>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> >, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<double>, const Eigen::Matrix<double, -1, -1> > >; Derived = Eigen::Matrix<double, -1, 1>]: Assertion `rows() == other.rows() && cols() == other.cols()' failed.
[pop-os:120139] *** Process received signal ***
[pop-os:120139] Signal: Aborted (6)
[pop-os:120139] Signal code: (-6)
[pop-os:120136] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7f22256703c0]
[pop-os:120136] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f22254af18b]
[pop-os:120136] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f222548e859]
[pop-os:120136] [ 3] [pop-os:120137] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7ffba9fc93c0]
[pop-os:120137] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7ffba9e0818b]
[pop-os:120137] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7ffba9de7859]
[pop-os:120137] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x25729)[0x7ffba9de7729]
[pop-os:120137] [ 4] [pop-os:120138] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7f47ae9df3c0]
[pop-os:120138] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f47ae81e18b]
[pop-os:120138] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f47ae7fd859]
[pop-os:120138] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x25729)[0x7f47ae7fd729]
[pop-os:120138] [ 4] [pop-os:120139] [ 0] /lib/x86_64-linux-gnu/libpthread.so.0(+0x153c0)[0x7f274e13f3c0]
[pop-os:120139] [ 1] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f274df7e18b]
[pop-os:120139] [ 2] /lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f274df5d859]
[pop-os:120139] [ 3] /lib/x86_64-linux-gnu/libc.so.6(+0x25729)[0x7f274df5d729]
[pop-os:120139] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x25729)[0x7f222548e729]
[pop-os:120136] [ 4] /lib/x86_64-linux-gnu/libc.so.6(+0x36f36)[0x7ffba9df8f36]
[pop-os:120137] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x36f36)[0x7f222549ff36]
[pop-os:120136] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x36f36)[0x7f47ae80ef36]
[pop-os:120138] [ 5] /lib/x86_64-linux-gnu/libc.so.6(+0x36f36)[0x7f274df6ef36]
[pop-os:120139] [ 5] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen9DenseBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS0_IT_EE+0x74)[0x7f27509da54e]
[pop-os:120139] [ 6] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen9DenseBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS0_IT_EE+0x74)[0x7f2227f0b54e]
[pop-os:120136] [ 6] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen9DenseBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS0_IT_EE+0x74)[0x7f47b127a54e]
[pop-os:120138] [ 6] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen9DenseBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS0_IT_EE+0x74)[0x7ffbac86454e]
[pop-os:120137] [ 6] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f27509d9989]
[pop-os:120139] [ 7] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f2227f0a989]
[pop-os:120136] [ 7] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f47b1279989]
[pop-os:120138] [ 7] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE10lazyAssignINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7ffbac863989]
[pop-os:120137] [ 7] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen8internal15assign_selectorINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEENS_13CwiseBinaryOpINS0_13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS0_18scalar_multiple_opIdEEKNS2_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EELb0ELb0EE3runERS3_RKSE_+0x30)[0x7f27509d912c]
[pop-os:120139] [ 8] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen8internal15assign_selectorINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEENS_13CwiseBinaryOpINS0_13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS0_18scalar_multiple_opIdEEKNS2_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EELb0ELb0EE3runERS3_RKSE_+0x30)[0x7f2227f0a12c]
[pop-os:120136] [ 8] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen8internal15assign_selectorINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEENS_13CwiseBinaryOpINS0_13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS0_18scalar_multiple_opIdEEKNS2_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EELb0ELb0EE3runERS3_RKSE_+0x30)[0x7ffbac86312c]
[pop-os:120137] [ 8] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen8internal15assign_selectorINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEENS_13CwiseBinaryOpINS0_13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS0_18scalar_multiple_opIdEEKNS2_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EELb0ELb0EE3runERS3_RKSE_+0x30)[0x7f47b127912c]
[pop-os:120138] [ 8] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE12_set_noaliasINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x3b)[0x7ffbac862693]
[pop-os:120137] [ 9] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE12_set_noaliasINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x3b)[0x7f2227f09693]
[pop-os:120136] [ 9] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE12_set_noaliasINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x3b)[0x7f27509d8693]
[pop-os:120139] [ 9] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE12_set_noaliasINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x3b)[0x7f47b1278693]
[pop-os:120138] [ 9] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE13_set_selectorINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEEvRKT_RKNS6_10false_typeE+0x2b)[0x7f27509d75eb]
[pop-os:120139] [10] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE13_set_selectorINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEEvRKT_RKNS6_10false_typeE+0x2b)[0x7ffbac8615eb]
[pop-os:120137] [10] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE13_set_selectorINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEEvRKT_RKNS6_10false_typeE+0x2b)[0x7f2227f085eb]
[pop-os:120136] [10] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE13_set_selectorINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEEvRKT_RKNS6_10false_typeE+0x2b)[0x7f47b12775eb]
[pop-os:120138] [10] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE4_setINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f47b1275e87]
[pop-os:120138] [11] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE4_setINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f2227f06e87]
[pop-os:120136] [11] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE4_setINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7f27509d5e87]
[pop-os:120139] [11] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen15PlainObjectBaseINS_6MatrixIdLin1ELi1ELi0ELin1ELi1EEEE4_setINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS6_18scalar_multiple_opIdEEKNS1_IdLin1ELin1ELi0ELin1ELin1EEEEESF_EEEERS2_RKNS_9DenseBaseIT_EE+0x45)[0x7ffbac85fe87]
[pop-os:120137] [11] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen6MatrixIdLin1ELi1ELi0ELin1ELi1EEaSINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS4_18scalar_multiple_opIdEEKNS0_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EEEERS1_RKNS_10MatrixBaseIT_EE+0x27)[0x7f47b1274529]
[pop-os:120138] [12] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen6MatrixIdLin1ELi1ELi0ELin1ELi1EEaSINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS4_18scalar_multiple_opIdEEKNS0_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EEEERS1_RKNS_10MatrixBaseIT_EE+0x27)[0x7f2227f05529]
[pop-os:120136] [12] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen6MatrixIdLin1ELi1ELi0ELin1ELi1EEaSINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS4_18scalar_multiple_opIdEEKNS0_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EEEERS1_RKNS_10MatrixBaseIT_EE+0x27)[0x7f27509d4529]
[pop-os:120139] [12] /tmp/SSAGES/build/libssagesgmx.so(_ZN5Eigen6MatrixIdLin1ELi1ELi0ELin1ELi1EEaSINS_13CwiseBinaryOpINS_8internal13scalar_sum_opIdEEKNS_12CwiseUnaryOpINS4_18scalar_multiple_opIdEEKNS0_IdLin1ELin1ELi0ELin1ELin1EEEEESD_EEEERS1_RKNS_10MatrixBaseIT_EE+0x27)[0x7ffbac85e529]
[pop-os:120137] [12] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES3CFF15PostIntegrationEPNS_8SnapshotERKNS_9CVManagerE+0xd5b)[0x7f27509cdcd1]
[pop-os:120139] [13] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES3CFF15PostIntegrationEPNS_8SnapshotERKNS_9CVManagerE+0xd5b)[0x7f47b126dcd1]
[pop-os:120138] [13] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES3CFF15PostIntegrationEPNS_8SnapshotERKNS_9CVManagerE+0xd5b)[0x7f2227efecd1]
[pop-os:120136] [13] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES3CFF15PostIntegrationEPNS_8SnapshotERKNS_9CVManagerE+0xd5b)[0x7ffbac857cd1]
[pop-os:120137] [13] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES4Hook19PostIntegrationHookEv+0x1f0)[0x7f2227fdd6fc]
[pop-os:120136] [14] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES4Hook19PostIntegrationHookEv+0x1f0)[0x7f47b134c6fc]
[pop-os:120138] [14] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES4Hook19PostIntegrationHookEv+0x1f0)[0x7ffbac9366fc]
[pop-os:120137] [14] /tmp/SSAGES/build/libssagesgmx.so(_ZN6SSAGES4Hook19PostIntegrationHookEv+0x1f0)[0x7f2750aac6fc]
[pop-os:120139] [14] ../ssages(do_md+0x375d)[0x55736586322a]
[pop-os:120137] [15] ../ssages(do_md+0x375d)[0x559e3431d22a]
[pop-os:120136] [15] ../ssages(do_md+0x375d)[0x55cfa5d8a22a]
[pop-os:120139] [15] ../ssages(do_md+0x375d)[0x55624ca6922a]
[pop-os:120138] [15] ../ssages(mdrunner+0x1f09)[0x55736585eaed]
[pop-os:120137] [16] ../ssages(_Z9gmx_mdruniPPc+0x1976)[0x55736585b95c]
[pop-os:120137] [17] ../ssages(mdrunner+0x1f09)[0x55624ca64aed]
[pop-os:120138] [16] ../ssages(_Z9gmx_mdruniPPc+0x1976)[0x55624ca6195c]
[pop-os:120138] [17] ../ssages(mdrunner+0x1f09)[0x55cfa5d85aed]
[pop-os:120139] [16] ../ssages(_Z9gmx_mdruniPPc+0x1976)[0x55cfa5d8295c]
[pop-os:120139] [17] ../ssages(mdrunner+0x1f09)[0x559e34318aed]
[pop-os:120136] [16] ../ssages(_Z9gmx_mdruniPPc+0x1976)[0x559e3431595c]
[pop-os:120136] [17] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(+0x2dfbc9)[0x7f2225e0bbc9]
[pop-os:120136] [18] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(+0x2dfbc9)[0x7f47af17abc9]
[pop-os:120138] [18] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(+0x2dfbc9)[0x7f274e8dabc9]
[pop-os:120139] [18] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(+0x2dfbc9)[0x7ffbaa764bc9]
[pop-os:120137] [18] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager3runEiPPc+0x3eb)[0x7f2225e0d69b]
[pop-os:120136] [19] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager3runEiPPc+0x3eb)[0x7f47af17c69b]
[pop-os:120138] [19] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager3runEiPPc+0x3eb)[0x7f274e8dc69b]
[pop-os:120139] [19] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager3runEiPPc+0x3eb)[0x7ffbaa76669b]
[pop-os:120137] [19] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager21runAsMainSingleModuleEiPPcPNS_26CommandLineModuleInterfaceE+0x7d)[0x7f47af17c8ab]
[pop-os:120138] [20] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager21runAsMainSingleModuleEiPPcPNS_26CommandLineModuleInterfaceE+0x7d)[0x7f274e8dc8ab]
[pop-os:120139] [20] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager21runAsMainSingleModuleEiPPcPNS_26CommandLineModuleInterfaceE+0x7d)[0x7f2225e0d8ab]
[pop-os:120136] [20] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager21runAsMainSingleModuleEiPPcPNS_26CommandLineModuleInterfaceE+0x7d)[0x7ffbaa7668ab]
[pop-os:120137] [20] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager14runAsMainCMainEiPPcPFiiS2_E+0x5b)[0x7f47af17c9cb]
[pop-os:120138] [21] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager14runAsMainCMainEiPPcPFiiS2_E+0x5b)[0x7f274e8dc9cb]
[pop-os:120139] [21] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager14runAsMainCMainEiPPcPFiiS2_E+0x5b)[0x7f2225e0d9cb]
[pop-os:120136] [21] /tmp/SSAGES/build/hooks/gromacs/gromacs/lib/libgromacs_mpi.so.1(_ZN3gmx24CommandLineModuleManager14runAsMainCMainEiPPcPFiiS2_E+0x5b)[0x7ffbaa7669cb]
[pop-os:120137] [21] ../ssages(_ZN6SSAGES6Driver3RunEv+0x20d)[0x559e3431238d]
[pop-os:120136] [22] ../ssages(_ZN6SSAGES6Driver3RunEv+0x20d)[0x55624ca5e38d]
[pop-os:120138] [22] ../ssages(_ZN6SSAGES6Driver3RunEv+0x20d)[0x55cfa5d7f38d]
[pop-os:120139] [22] ../ssages(_ZN6SSAGES6Driver3RunEv+0x20d)[0x55736585838d]
[pop-os:120137] [22] ../ssages(main+0x40d)[0x55cfa5d47dbd]
[pop-os:120139] [23] ../ssages(main+0x40d)[0x559e342dadbd]
[pop-os:120136] [23] ../ssages(main+0x40d)[0x55624ca26dbd]
[pop-os:120138] [23] ../ssages(main+0x40d)[0x557365820dbd]
[pop-os:120137] [23] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f47ae7ff0b3]
[pop-os:120138] [24] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f274df5f0b3]
[pop-os:120139] [24] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f22254900b3]
[pop-os:120136] [24] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7ffba9de90b3]
[pop-os:120137] [24] ../ssages(_start+0x2e)[0x559e342da74e]
[pop-os:120136] *** End of error message ***
../ssages(_start+0x2e)[0x55624ca2674e]
[pop-os:120138] *** End of error message ***
../ssages(_start+0x2e)[0x55cfa5d4774e]
[pop-os:120139] *** End of error message ***
../ssages(_start+0x2e)[0x55736582074e]
[pop-os:120137] *** End of error message ***
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 1 with PID 0 on node pop-os exited on signal 6 (Aborted).
--------------------------------------------------------------------------
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