supersonictw

#!/bin/bash
# Ollama Model Export Script
# Usage: bash ollama-export.sh vicuna:7b
# SPDX-License-Identifier: MIT (https://ncurl.xyz/s/o_o6DVqIR)
# https://gist.github.com/supersonictw/f6cf5e599377132fe5e180b3d495c553

# Interrupt if any error occurred
set -e

# Declare

ckandoth

This guide will show you how to install conda and then use it to install nextflow and singularity for executing popular bioinformatics workflows. Unfortunately, singularity is not available on Windows or macOS. So, this guide will only target Linux environments. If you have to use Windows 10, then try WSL2. If you have to use macOS, then try a Virtual Machine.

Download the Miniconda3 installer for Linux environments:

curl -L https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh -o miniconda.sh

Install into a folder named miniconda3 under your home directory, and delete the installer:

bash miniconda.sh -bup $HOME/miniconda3 && rm -f miniconda.sh

jrsa

$ 1 0.000005 0.2954511527092107 50 5 50
402 400 496 560 496 1 0\s0\s40\s-9\s0\s0\s0.5 0\s0\s40\s9\s0\s0\s0.5 0\s1\s-12.107891388002887\s0.49020072449645724\s100 0\s1\s-0.49020072449645724\s0.4899458951514504\s100 0\s1\s0\s0.4899458951514504\s100 0\s1\s-3.4423968860970877\s0.48994335934397704\s100 0\s1\s-8.969060690957324\s-4.088038007650795\s100 0\s-1\s0.48993828812503004\s-0.4896834587831105\s100 0\s-1\s0\s-0.4896834587831105\s100 0\s-1\s16.04076664862162\s-0.48993828812503004\s100 0\s-1\s0.0070150138786200245\s-0.02392429516405592\s100 0\s-1\s0\s-0.02392429516405592\s100 0\s-1\s9.993078392331174\s-0.0070150138786200245\s100 0\s1\s0\s0.48967838756419013\s100 0\s1\s-0.4899332169060475\s0.48967838756419013\s100 0\s1\s-6.996370694155912\s0.4899332169060475\s100 0\s1\s0\s-13.57798136396477\s100 0\s1\s0\s-8.999999996969999\s100
w 560 496 576 496 0
w 576 496 592 496 0
g 320 464 320 496 0
w 400 496 384 496 0
r 384 496 384 368 0 15000
r 544 368 544 432 0 1000000
w 544 432 544 464 1
R 544 368 544 336 0 0 40 9 0 0 0.5

xlfe

import sys, os, json
import datetime

sys.path.append(os.path.expanduser('~/google-cloud-sdk/platform/google_appengine/'))
from google.appengine.api.files import records
from google.appengine.datastore import entity_pb
from google.appengine.api import datastore

def myconverter(o):
    if isinstance(o, datetime.datetime):

isaiahtaylor

#!/bin/bash
set -e
function cleanup {
        echo ""
        echo "Cleaning up processes"
        kill -SIGINT -$GID
}
trap cleanup EXIT

if [ "$1" ]; then

mfansler

#!/bin/bash                                                                                                                                    

if [ "$#" -ne 1 ]; then
  echo -e "Incorrect number of parameters! Usage:\n    index-gtf.sh <file.gtf(.gz)>" >&2
  exit 1
fi

gtf="$1"

if [[ $gtf =~ \.gz$ ]]; then

vsoch

Bootstrap: localimage
From: /home/vanessa/.singularity/shub/deepvariant-docker-deepvariant:0.5.0.simg

# sregistry get gcr.io/deepvariant-docker/deepvariant:0.5.0
# sudo singularity build deepvariant Singularity

%environment
    PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    DV_GPU_BUILD=0
    export PATH DV_GPU_BUILD

ForgottenUmbrella

How to publish Python apps for human beings

So, you've created a Python app (be it a graphical user interface with Qt or the like, or a simple command line interface). Great! But how are others going to use it? Python applications often have dependencies (e.g. from third-party modules), and they also need a Python interpreter to run them. For a developer, installing all the necessary bits and bobs to make things work is okay, but that's unacceptable for a normal user - they just want to download the thing and run it.

Below are simple instructions to publish your app on the three main operating systems: Windows, macOS and Linux.

photocyte

>Illumina Single End Apapter 1					
ACACTCTTTCCCTACACGACGCTGTTCCATCT
>Illumina Single End Apapter 2					
CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
>Illumina Single End PCR Primer 1				
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
>Illumina Single End PCR Primer 2				
CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT
>Illumina Single End Sequencing Primer			
ACACTCTTTCCCTACACGACGCTCTTCCGATCT

mrw34

#!/bin/bash

set -euo pipefail

openssl req -new -text -passout pass:abcd -subj /CN=localhost -out server.req -keyout privkey.pem
openssl rsa -in privkey.pem -passin pass:abcd -out server.key
openssl req -x509 -in server.req -text -key server.key -out server.crt
chmod 600 server.key
test $(uname -s) = Linux && chown 70 server.key
docker run -d --name postgres -e POSTGRES_HOST_AUTH_METHOD=trust -v "$(pwd)/server.crt:/var/lib/postgresql/server.crt:ro" -v "$(pwd)/server.key:/var/lib/postgresql/server.key:ro" postgres:12-alpine -c ssl=on -c ssl_cert_file=/var/lib/postgresql/server.crt -c ssl_key_file=/var/lib/postgresql/server.key