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@patrick-werner
Last active March 24, 2020 14:57
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Multiple Specimen Testing
[
{
"resourceType": "Specimen",
"id": "tumor",
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/v2-0487",
"code": "TUMOR",
"display": "Tumor"
}
]
},
"subject": {
"reference": "urn:uuid:f7a438e6-f484-453d-97e8-aa4d51008648"
}
},
{
"resourceType": "Specimen",
"id": "blood (normal specimen)",
"type": {
"coding": [
{
"system": "http://terminology.hl7.org/CodeSystem/v2-0487",
"code": "BLD",
"display": "Whole blood"
}
]
},
"subject": {
"reference": "urn:uuid:f7a438e6-f484-453d-97e8-aa4d51008648"
}
},
{
"resourceType": "Observation",
"meta": {
"profile": [
"http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/variant"
]
},
"subject": {
"reference": "urn:uuid:f7a438e6-f484-453d-97e8-aa4d51008648"
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://loinc.org",
"code": "LA9633-4",
"display": "Present"
}
]
},
"specimen": {
"extension": [
{
"url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/multi-specimen",
"extension": [
{
"url": "specimen-relation",
"valueCodeableConcept": {
"coding": [
{
"system": "TBD",
"code": "tumor"
}
]
}
},
{
"url": "specimen",
"valueReference": {
"reference": "Specimen/tumor"
}
}
]
},
{
"url": "http://hl7.org/fhir/uv/genomics-reporting/StructureDefinition/multi-specimen",
"extension": [
{
"url": "specimen-relation",
"valueCodeableConcept": {
"coding": [
{
"system": "TBD",
"code": "normal-tissue"
}
]
}
},
{
"url": "specimen",
"valueReference": {
"reference": "Specimen/blood"
}
}
]
}
],
"reference": "Specimen/tumor"
},
"component": [
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "48002-0",
"display": "Genomic source class"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://loinc.org",
"code": "LA6684-0",
"display": "Somatic"
}
]
}
},
{
"code": {
"coding": [
{
"system": "http://loinc.org",
"code": "48018-6",
"display": "Gene studied [ID]"
}
]
},
"valueCodeableConcept": {
"coding": [
{
"system": "http://www.genenames.org/geneId",
"code": "HGNC:7989",
"display": "NRAS"
}
]
}
}
]
}
]
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