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paulklemm / install.R
Last active May 3, 2024 09:16
Install these packages after creating a new R installation
renv::install("BiocManager", prompt = FALSE)
renv::install("languageserver", prompt = FALSE)
renv::install("tidyverse", prompt = FALSE)
renv::install("xaringan", prompt = FALSE)
renv::install("targets", prompt = FALSE)
renv::install("visNetwork", prompt = FALSE)
renv::install("httpgd", prompt = FALSE)
renv::install("patchwork", prompt = FALSE)
renv::install("devtools", prompt = FALSE)
renv::install("roxygen2", prompt = FALSE)
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paulklemm / maldi_theodora_normalisation.py
Created January 16, 2024 14:42
Revise Theodora's Data Normalisation
import uMAIA
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
import warnings
import os
# Define the path to save the data
workdir = '/beegfs/scratch/bruening_scratch/pklemm/2024-01-theodora/uMAIA/data_maldi'