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<#
  1. Leaf
  Given a text file of TIF/TIFF filenames, create DZI (Deep Zoom Image) tiles from TIFs
  and create a mirror directory structure for DZI file outputs.

  * Handles filenames with entry separators
  * Ignores TIF older than its DZI mirror unless -force param is used
  * Requires libvips (https://libvips.github.io/libvips/)

  .\tif2dzi.ps1 -in c:\dev\abc\extract\extracted\tifs\abc-tifs-1.txt `

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<#
	Peter Tyrrell, Andornot

	Replaces old sql server name with new in textbase binary *.cbs file.

	Note: Uses PowerShell Core syntax. See comments for Windows PowerShell.
	Note: Server names of different lengths corrupt the file.
#>

param (

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<#
	Modifies regedit to tell all versions of .NET to use strongest available TLS. Global setting.
	Requires admin privileges.

	Peter Tyrrell
#>

# check for admin 
if (-NOT ([Security.Principal.WindowsPrincipal] [Security.Principal.WindowsIdentity]::GetCurrent()).IsInRole([Security.Principal.WindowsBuiltInRole] "Administrator")) {
    Write-Warning ("You do not have admin privileges. Re-run this script as an administrator.")

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<#
    Sync a local to remote directory in SFTP mode
#>

param(
    [Parameter(Mandatory = $false, Position = 0)]
    [string]$logsrc = "",
    [Parameter(Mandatory = $true, Position = 1)]
    [string]$hostname,
    [Parameter(Mandatory = $true, Position = 2)]

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protected void Application_Start() 
{
  // various setup bits here...
  
  Config.Current.Pipeline.AuthorizeImage +=
  delegate (IHttpModule sender, HttpContext context, IUrlAuthorizationEventArgs e)
  {
    // only restrict ~/media
    if (!e.VirtualPath.StartsWith(VirtualPathUtility.ToAbsolute("~/media")))
    {

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using System.Web.Http;
using System.Web.Mvc;
using System.Web.Routing;
using Andi.MVC.Core;
using Andi.MVC.Core.Infrastructure.Globalization;

namespace Andi.MVC.Web
{
  public class MvcApplication : System.Web.HttpApplication
  {

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  public class MediaApiController : ApiController
  {

    public HttpResponseMessage Get(string filepath)
    {
      var path = HostingEnvironment.MapPath($"~/media/{filepath}") ?? string.Empty;
      var mediaType = MediaTypeHeaderValue.Parse(MimeMapping.GetMimeMapping(filepath));
      FileStream stream;

      try

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<#
    Logging functions.
#>

function logError([string]$logsrc, [string]$msg) {
    if ([String]::IsNullOrWhiteSpace($logsrc)) {
        write-log -msg $msg -level "ERROR"
    }
    elseif (@(".txt", ".log").Contains([System.IO.Path]::GetExtension($logsrc)) -eq $true) {
        write-log -msg $msg -level "ERROR" -file $logsrc

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<#
    Zip up textbase files in preparation for FTP sync to Andornot.
    Peter Tyrrell, ptyrrell@andornot.com

    -textbases c:\path\to\accessions.tba, c:\path\to\descriptions.tba
    -out c:\path\to\destination
#>

param (
    [string[]] $textbases,

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param (
    [Parameter(Mandatory = $true)]
    [string]$in,
    [string]$out = "d:\dev-archive"
)

$extract_output_dir = "$in\extract\extracted\output\*"
remove-item $extract_output_dir -Recurse
Write-Host "Removed $extract_output_dir"