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December 11, 2013 21:23
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== 2013-12-11 22:08:17,209 main INFO This is EasyBuild 1.9.0 (framework: 1.9.0, easyblocks: 1.9.0) on host login10. | |
== 2013-12-11 22:08:17,210 main.filetools DEBUG run_cmd: running cmd which eb (in /import/bc2/soft/centos6/installed_eb_files/Python) | |
== 2013-12-11 22:08:17,217 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:08:17,218 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:08:17,219 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:08:17,219 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,220 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,220 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:08:17,221 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,221 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,222 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,222 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,223 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,223 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,223 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,224 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,224 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,225 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,225 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,226 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,226 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,226 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,226 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,226 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,227 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:08:17,227 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,227 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,227 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:17,228 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle init with modifications to support oldstyle options | |
== 2013-12-11 22:08:17,228 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle_init filename /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild_config.py kwargs {} | |
== 2013-12-11 22:08:17,228 main.config DEBUG variables before oldstyle_init {} | |
== 2013-12-11 22:08:17,228 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle_read_configuration filename /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild_config.py | |
== 2013-12-11 22:08:17,231 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key build_path usage found, replacing with newkey buildpath | |
== 2013-12-11 22:08:17,231 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key module_classes usage found, replacing with newkey moduleclasses | |
== 2013-12-11 22:08:17,231 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key source_path usage found, replacing with newkey sourcepath | |
== 2013-12-11 22:08:17,231 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key install_path usage found, replacing with newkey installpath | |
== 2013-12-11 22:08:17,232 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key repository_path usage found, replacing with newkey repositorypath | |
== 2013-12-11 22:08:17,232 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key log_dir usage found, replacing with newkey tmp_logdir | |
== 2013-12-11 22:08:17,232 main.config WARNING Deprecated functionality, will no longer work in v2.0: oldstyle key log_format usage found, replacing with newkey logfile_format | |
== 2013-12-11 22:08:17,232 main.config DEBUG variables after oldstyle_init read_configuration (/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild_config.py) {'GitRepository': <class 'easybuild.tools.repository.GitRepository'>, 'buildpath': '/import/bc2/home/admin/pub/.local/easybuild/build', 'repository': <easybuild.tools.repository.FileRepository object at 0x1fcc490>, 'installpath': '/import/bc2/home/admin/pub/.local/easybuild', 'sourcepath': '/import/bc2/home/admin/pub/.local/easybuild/sources', 'repositorypath': '/import/bc2/home/admin/pub/.local/easybuild/ebfiles_repo', 'moduleclasses': ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis'], 'logfile_format': ('easybuild', 'easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'), 'tmp_logdir': '/scratch', 'FileRepository': <class 'easybuild.tools.repository.FileRepository'>, '__doc__': '\nEasyBuild configuration file.\n This is now frozen.\n All new configuration should be done through the options parser.\n This is deprecated and will be removed in 2.0\n\n@author: Stijn De Weirdt (Ghent University)\n@author: Dries Verdegem (Ghent University)\n@author: Kenneth Hoste (Ghent University)\n@author: Pieter De Baets (Ghent University)\n@author: Jens Timmerman (Ghent University)\n@author: Toon Willems (Ghent University)\n@author: Fotis Georgatos (University of Luxembourg)\n', 'SvnRepository': <class 'easybuild.tools.repository.SvnRepository'>} | |
== 2013-12-11 22:08:17,233 main.config WARNING Deprecated functionality, will no longer work in v2.0: Adapt code to use read_environment from easybuild.tools.utilities and do not use oldstyle environment variables | |
== 2013-12-11 22:08:17,233 main.config DEBUG Old style env var EASYBUILDBUILDPATH not defined. | |
== 2013-12-11 22:08:17,233 main.config DEBUG Old style env var EASYBUILDTESTOUTPUT not defined. | |
== 2013-12-11 22:08:17,233 main.config DEBUG Old style env var EASYBUILDCONFIG not defined. | |
== 2013-12-11 22:08:17,233 main.config DEBUG Old style env var EASYBUILDSOURCEPATH not defined. | |
== 2013-12-11 22:08:17,233 main.config DEBUG Old style env var EASYBUILDINSTALLPATH not defined. | |
== 2013-12-11 22:08:17,234 main.config DEBUG Old style env var EASYBUILDLOGDIR not defined. | |
== 2013-12-11 22:08:17,234 main.config DEBUG Old style env var EASYBUILDLOGFORMAT not defined. | |
== 2013-12-11 22:08:17,234 main.config DEBUG variables after oldstyle_init read_environment {'GitRepository': <class 'easybuild.tools.repository.GitRepository'>, 'buildpath': '/import/bc2/home/admin/pub/.local/easybuild/build', 'repository': <easybuild.tools.repository.FileRepository object at 0x1fcc490>, 'installpath': '/import/bc2/home/admin/pub/.local/easybuild', 'sourcepath': '/import/bc2/home/admin/pub/.local/easybuild/sources', 'repositorypath': '/import/bc2/home/admin/pub/.local/easybuild/ebfiles_repo', 'moduleclasses': ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis'], 'logfile_format': ('easybuild', 'easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'), 'tmp_logdir': '/scratch', 'FileRepository': <class 'easybuild.tools.repository.FileRepository'>, '__doc__': '\nEasyBuild configuration file.\n This is now frozen.\n All new configuration should be done through the options parser.\n This is deprecated and will be removed in 2.0\n\n@author: Stijn De Weirdt (Ghent University)\n@author: Dries Verdegem (Ghent University)\n@author: Kenneth Hoste (Ghent University)\n@author: Pieter De Baets (Ghent University)\n@author: Jens Timmerman (Ghent University)\n@author: Toon Willems (Ghent University)\n@author: Fotis Georgatos (University of Luxembourg)\n', 'SvnRepository': <class 'easybuild.tools.repository.SvnRepository'>} | |
== 2013-12-11 22:08:17,234 main.config DEBUG Oldstyle support: no action for dest moduleclasses. | |
== 2013-12-11 22:08:17,234 main.config DEBUG Oldstyle support: no action for dest logfile_format. | |
== 2013-12-11 22:08:17,235 main.config DEBUG Oldstyle support: no action for dest tmp_logdir. | |
== 2013-12-11 22:08:17,235 main.config DEBUG Updating config variables with generaloption dict {'modules_tool': 'Lmod', 'subdir_modules': 'modules', 'buildpath': '/tmp/easybuild', 'repository': 'FileRepository', 'show_default_moduleclasses': False, 'installpath': '/import/bc2/soft/centos6', 'sourcepath': '/import/bc2/soft/centos6/source', 'testoutput': None, 'module_naming_scheme': 'JustAppNameAndVersion', 'avail_repositories': False, 'repositorypath': ['/import/bc2/soft/centos6/installed_eb_files'], 'avail_module_naming_schemes': False, 'prefix': None, 'subdir_software': 'software', 'avail_modules_tools': False, 'config': '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild_config.py'} | |
== 2013-12-11 22:08:17,235 main.config DEBUG Config variables: {'show_default_moduleclasses': False, 'module_naming_scheme': 'JustAppNameAndVersion', 'avail_module_naming_schemes': False, 'prefix': None, 'FileRepository': <class 'easybuild.tools.repository.FileRepository'>, 'modules_tool': 'Lmod', 'GitRepository': <class 'easybuild.tools.repository.GitRepository'>, 'installpath': '/import/bc2/soft/centos6', 'testoutput': None, 'subdir_software': 'software', 'config': '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild_config.py', '__doc__': '\nEasyBuild configuration file.\n This is now frozen.\n All new configuration should be done through the options parser.\n This is deprecated and will be removed in 2.0\n\n@author: Stijn De Weirdt (Ghent University)\n@author: Dries Verdegem (Ghent University)\n@author: Kenneth Hoste (Ghent University)\n@author: Pieter De Baets (Ghent University)\n@author: Jens Timmerman (Ghent University)\n@author: Toon Willems (Ghent University)\n@author: Fotis Georgatos (University of Luxembourg)\n', 'buildpath': '/tmp/easybuild', 'repository': 'FileRepository', 'repositorypath': ['/import/bc2/soft/centos6/installed_eb_files'], 'moduleclasses': ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis', 'geo', 'lang', 'toolchain'], 'logfile_format': ('easybuild', 'easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'), 'tmp_logdir': '/scratch', 'subdir_modules': 'modules', 'avail_modules_tools': False, 'sourcepath': '/import/bc2/soft/centos6/source', 'avail_repositories': False, 'SvnRepository': <class 'easybuild.tools.repository.SvnRepository'>} | |
== 2013-12-11 22:08:17,283 main DEBUG Paths: [('2.7.5-goolf-1.4.10.eb', False)] | |
== 2013-12-11 22:08:17,284 main.easyconfig.format.format DEBUG retrieve_blocks_in_spec: derived easyconfig format version: 1.0 | |
== 2013-12-11 22:08:17,284 main DEBUG Processing easyconfig /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb | |
== 2013-12-11 22:08:17,285 main.EasyConfig INFO Obtained list of valid module classes: ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis', 'geo', 'lang', 'toolchain'] | |
== 2013-12-11 22:08:17,285 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:08:17,286 main.EasyConfig DEBUG List of valid stops obtained: ['fetch', 'ready', 'source', 'patch', 'prepare', 'configure', 'build', 'test', 'install', 'extensions', 'package', 'postproc', 'sanitycheck', 'cleanup', 'module', 'testcases'] | |
== 2013-12-11 22:08:17,286 main.EasyConfigParser DEBUG Process filename /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb with get function (<function read_file at 0x1c0dde8>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb',)), set function (<function write_file at 0x1c0de60>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb', None)) | |
== 2013-12-11 22:08:17,287 main.EasyConfigParser DEBUG No version found, using default 1.0 | |
== 2013-12-11 22:08:17,289 main.FormatOneZero DEBUG No section found. | |
== 2013-12-11 22:08:17,290 main.FormatOneZero DEBUG Found header # Built with 1.9.0 on 2013-11-29_00-48-54 | |
== 2013-12-11 22:08:17,290 main.easyconfig.format.pyheaderconfigobj WARNING Deprecated functionality, will no longer work in v2.0: Magic 'global' easyconfigs variables like shared_lib_ext should no longer be used | |
== 2013-12-11 22:08:17,290 main.FormatOneZero DEBUG pyheader initial global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:08:17,291 main.FormatOneZero DEBUG pyheader initial local_vars {} | |
== 2013-12-11 22:08:17,291 main.FormatOneZero DEBUG pyheader text being exec'ed: name = 'Python' | |
version = '2.7.5' | |
homepage = 'http://python.org/' | |
description = "Python is a programming language that lets you work more quickly and integrate your systems more effectively." | |
toolchain = {'name': 'goolf', 'version': '1.4.10'} | |
toolchainopts = {'pic': True, 'opt': True, 'optarch': True} | |
numpyversion = '1.7.0' | |
scipyversion = '0.12.0' | |
source_urls = ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
sources = ['%(name)s-%(version)s.tgz'] | |
patches = ['python-%(version)s_libffi_int128_icc.patch'] | |
# python needs bzip2 to build the bz2 package | |
dependencies = [ | |
('bzip2', '1.0.6'), | |
('zlib', '1.2.8'), | |
('libreadline', '6.2'), | |
('ncurses', '5.9'), | |
] | |
#sanity_check_paths = { | |
# 'files': [], | |
# 'dirs': ['Bio'], | |
#} | |
# order is important! | |
exts_list = [ | |
('setuptools', '0.6c11', { | |
'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/'], | |
}), | |
('nose', '1.3.0', { | |
'source_urls': ['http://pypi.python.org/packages/source/n/nose/'], | |
}), | |
('numpy', numpyversion, { | |
'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/%s' % numpyversion, 'download')], | |
'patches': [ | |
'numpy-%s_distutils_multiple-lib-dirs.patch' % numpyversion, | |
'numpy-iqacml.patch', | |
], | |
}), | |
('scipy', scipyversion, { | |
'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/%s' % scipyversion, 'download')], | |
}), | |
('mpi4py', '1.3', { | |
'source_urls': ['https://mpi4py.googlecode.com/files/'], | |
}), | |
('paycheck', '1.0.2', { | |
'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/'], | |
}), | |
('argparse', '1.2.1', { | |
'source_urls': ['http://argparse.googlecode.com/files/'], | |
}), | |
('lockfile', '0.9.1', { | |
'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/'], | |
}), | |
('Cython', '0.19.1', { | |
'source_urls': ['http://www.cython.org/release/'], | |
}), | |
('biopython', '1.62', { | |
'source_urls': ['http://biopython.org/DIST'], | |
'options': {'modulename': 'Bio'}, | |
}), | |
] | |
moduleclass = 'lang' | |
# Build statistics | |
buildstats = [{ | |
'easybuild-framework_version': '1.9.0', | |
'easybuild-easyblocks_version': '1.9.0', | |
'host': 'login11', | |
'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', | |
'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', | |
'core_count': 16, | |
'timestamp': 1385682534, | |
'build_time': 845.39, | |
'install_size': 209456294, | |
}] | |
== 2013-12-11 22:08:17,292 main.FormatOneZero DEBUG pyheader final global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', '__builtins__': {'bytearray': <type 'bytearray'>, 'IndexError': <type 'exceptions.IndexError'>, 'all': <built-in function all>, 'help': Type help() for interactive help, or help(object) for help about object., 'vars': <built-in function vars>, 'SyntaxError': <type 'exceptions.SyntaxError'>, 'unicode': <type 'unicode'>, 'UnicodeDecodeError': <type 'exceptions.UnicodeDecodeError'>, 'isinstance': <built-in function isinstance>, 'copyright': Copyright (c) 2001-2010 Python Software Foundation. | |
All Rights Reserved. | |
Copyright (c) 2000 BeOpen.com. | |
All Rights Reserved. | |
Copyright (c) 1995-2001 Corporation for National Research Initiatives. | |
All Rights Reserved. | |
Copyright (c) 1991-1995 Stichting Mathematisch Centrum, Amsterdam. | |
All Rights Reserved., 'NameError': <type 'exceptions.NameError'>, 'BytesWarning': <type 'exceptions.BytesWarning'>, 'dict': <type 'dict'>, 'input': <built-in function input>, 'oct': <built-in function oct>, 'bin': <built-in function bin>, 'SystemExit': <type 'exceptions.SystemExit'>, 'StandardError': <type 'exceptions.StandardError'>, 'format': <built-in function format>, 'repr': <built-in function repr>, 'sorted': <built-in function sorted>, 'False': False, 'RuntimeWarning': <type 'exceptions.RuntimeWarning'>, 'list': <type 'list'>, 'iter': <built-in function iter>, 'reload': <built-in function reload>, 'Warning': <type 'exceptions.Warning'>, '__package__': None, 'round': <built-in function round>, 'dir': <built-in function dir>, 'cmp': <built-in function cmp>, 'set': <type 'set'>, 'bytes': <type 'str'>, 'reduce': <built-in function reduce>, 'intern': <built-in function intern>, 'issubclass': <built-in function issubclass>, 'Ellipsis': Ellipsis, 'EOFError': <type 'exceptions.EOFError'>, 'locals': <built-in function locals>, 'BufferError': <type 'exceptions.BufferError'>, 'slice': <type 'slice'>, 'FloatingPointError': <type 'exceptions.FloatingPointError'>, 'sum': <built-in function sum>, 'getattr': <built-in function getattr>, 'abs': <built-in function abs>, 'exit': Use exit() or Ctrl-D (i.e. EOF) to exit, 'print': <built-in function print>, 'True': True, 'FutureWarning': <type 'exceptions.FutureWarning'>, 'ImportWarning': <type 'exceptions.ImportWarning'>, 'None': None, 'hash': <built-in function hash>, 'ReferenceError': <type 'exceptions.ReferenceError'>, 'len': <built-in function len>, 'credits': Thanks to CWI, CNRI, BeOpen.com, Zope Corporation and a cast of thousands | |
for supporting Python development. See www.python.org for more information., 'frozenset': <type 'frozenset'>, '__name__': '__builtin__', 'ord': <built-in function ord>, 'super': <type 'super'>, 'TypeError': <type 'exceptions.TypeError'>, 'license': See http://www.python.org/2.6/license.html, 'KeyboardInterrupt': <type 'exceptions.KeyboardInterrupt'>, 'UserWarning': <type 'exceptions.UserWarning'>, 'filter': <built-in function filter>, 'range': <built-in function range>, 'staticmethod': <type 'staticmethod'>, 'SystemError': <type 'exceptions.SystemError'>, 'BaseException': <type 'exceptions.BaseException'>, 'pow': <built-in function pow>, 'RuntimeError': <type 'exceptions.RuntimeError'>, 'float': <type 'float'>, 'MemoryError': <type 'exceptions.MemoryError'>, 'StopIteration': <type 'exceptions.StopIteration'>, 'globals': <built-in function globals>, 'divmod': <built-in function divmod>, 'enumerate': <type 'enumerate'>, 'apply': <built-in function apply>, 'LookupError': <type 'exceptions.LookupError'>, 'open': <built-in function open>, 'quit': Use quit() or Ctrl-D (i.e. EOF) to exit, 'basestring': <type 'basestring'>, 'UnicodeError': <type 'exceptions.UnicodeError'>, 'zip': <built-in function zip>, 'hex': <built-in function hex>, 'long': <type 'long'>, 'next': <built-in function next>, 'ImportError': <type 'exceptions.ImportError'>, 'chr': <built-in function chr>, 'xrange': <type 'xrange'>, 'type': <type 'type'>, '__doc__': "Built-in functions, exceptions, and other objects.\n\nNoteworthy: None is the `nil' object; Ellipsis represents `...' in slices.", 'Exception': <type 'exceptions.Exception'>, 'tuple': <type 'tuple'>, 'UnicodeTranslateError': <type 'exceptions.UnicodeTranslateError'>, 'reversed': <type 'reversed'>, 'UnicodeEncodeError': <type 'exceptions.UnicodeEncodeError'>, 'IOError': <type 'exceptions.IOError'>, 'hasattr': <built-in function hasattr>, 'delattr': <built-in function delattr>, 'setattr': <built-in function setattr>, 'raw_input': <built-in function raw_input>, 'SyntaxWarning': <type 'exceptions.SyntaxWarning'>, 'compile': <built-in function compile>, 'ArithmeticError': <type 'exceptions.ArithmeticError'>, 'str': <type 'str'>, 'property': <type 'property'>, 'GeneratorExit': <type 'exceptions.GeneratorExit'>, 'int': <type 'int'>, '__import__': <built-in function __import__>, 'KeyError': <type 'exceptions.KeyError'>, 'coerce': <built-in function coerce>, 'PendingDeprecationWarning': <type 'exceptions.PendingDeprecationWarning'>, 'file': <type 'file'>, 'EnvironmentError': <type 'exceptions.EnvironmentError'>, 'unichr': <built-in function unichr>, 'id': <built-in function id>, 'OSError': <type 'exceptions.OSError'>, 'DeprecationWarning': <type 'exceptions.DeprecationWarning'>, 'min': <built-in function min>, 'UnicodeWarning': <type 'exceptions.UnicodeWarning'>, 'execfile': <built-in function execfile>, 'any': <built-in function any>, 'complex': <type 'complex'>, 'bool': <type 'bool'>, 'ValueError': <type 'exceptions.ValueError'>, 'NotImplemented': NotImplemented, 'map': <built-in function map>, 'buffer': <type 'buffer'>, 'max': <built-in function max>, 'object': <type 'object'>, 'TabError': <type 'exceptions.TabError'>, 'callable': <built-in function callable>, 'ZeroDivisionError': <type 'exceptions.ZeroDivisionError'>, 'eval': <built-in function eval>, '__debug__': True, 'IndentationError': <type 'exceptions.IndentationError'>, 'AssertionError': <type 'exceptions.AssertionError'>, 'classmethod': <type 'classmethod'>, 'UnboundLocalError': <type 'exceptions.UnboundLocalError'>, 'NotImplementedError': <type 'exceptions.NotImplementedError'>, 'AttributeError': <type 'exceptions.AttributeError'>, 'OverflowError': <type 'exceptions.OverflowError'>}, 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:08:17,292 main.FormatOneZero DEBUG pyheader final local_vars {'buildstats': [{'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'build_time': 845.38999999999999, 'timestamp': 1385682534, 'core_count': 16, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'easybuild-easyblocks_version': '1.9.0', 'easybuild-framework_version': '1.9.0'}], 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'Python', 'scipyversion': '0.12.0', 'exts_list': [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'moduleclass': 'lang', 'sources': ['%(name)s-%(version)s.tgz'], 'version': '2.7.5', 'dependencies': [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'source_urls': ['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'toolchainopts': {'opt': True, 'optarch': True, 'pic': True}, 'numpyversion': '1.7.0', 'homepage': 'http://python.org/', 'patches': ['python-%(version)s_libffi_int128_icc.patch'], 'description': 'Python is a programming language that lets you work more quickly and integrate your systems more effectively.'} | |
== 2013-12-11 22:08:17,292 main.FormatOneZero DEBUG No docstring found in local_vars | |
== 2013-12-11 22:08:17,293 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:08:17,294 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:17,295 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:08:17,295 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:08:17,296 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:17,296 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:17,297 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:17,298 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:08:17,298 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:08:17,298 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:17,298 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:17,299 main.EasyConfig INFO setting config option buildstats: value [{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}] | |
== 2013-12-11 22:08:17,299 main.EasyConfig INFO setting config option toolchain: value {'version': '1.4.10', 'name': 'goolf'} | |
== 2013-12-11 22:08:17,299 main.EasyConfig INFO setting config option name: value Python | |
== 2013-12-11 22:08:17,299 main.EasyConfig DEBUG Ignoring unknown config option scipyversion (value: 0.12.0) | |
== 2013-12-11 22:08:17,300 main.EasyConfig INFO setting config option exts_list: value [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})] | |
== 2013-12-11 22:08:17,301 main.EasyConfig INFO setting config option moduleclass: value lang | |
== 2013-12-11 22:08:17,301 main.easyconfig.easyconfig WARNING Unable to resolve template value %(name)s-%(version)s.tgz with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:17,301 main.EasyConfig INFO setting config option sources: value ['%(name)s-%(version)s.tgz'] | |
== 2013-12-11 22:08:17,301 main.EasyConfig INFO setting config option version: value 2.7.5 | |
== 2013-12-11 22:08:17,301 main.EasyConfig INFO setting config option dependencies: value [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')] | |
== 2013-12-11 22:08:17,302 main.easyconfig.easyconfig WARNING Unable to resolve template value http://www.python.org/ftp/%(namelower)s/%(version)s/ with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:17,302 main.EasyConfig INFO setting config option source_urls: value ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
== 2013-12-11 22:08:17,302 main.EasyConfig INFO setting config option toolchainopts: value {'opt': True, 'optarch': True, 'pic': True} | |
== 2013-12-11 22:08:17,302 main.EasyConfig DEBUG Ignoring unknown config option numpyversion (value: 1.7.0) | |
== 2013-12-11 22:08:17,302 main.EasyConfig INFO setting config option homepage: value http://python.org/ | |
== 2013-12-11 22:08:17,303 main.easyconfig.easyconfig WARNING Unable to resolve template value python-%(version)s_libffi_int128_icc.patch with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:17,303 main.EasyConfig INFO setting config option patches: value ['python-%(version)s_libffi_int128_icc.patch'] | |
== 2013-12-11 22:08:17,303 main.EasyConfig INFO setting config option description: value Python is a programming language that lets you work more quickly and integrate your systems more effectively. | |
== 2013-12-11 22:08:17,304 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:17,305 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,306 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,306 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,306 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:17,306 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:17,306 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:17,307 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:17,308 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:17,309 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,309 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,309 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:17,310 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:17,310 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:17,310 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:17,310 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:17,310 main.EasyConfig INFO Validating easy block | |
== 2013-12-11 22:08:17,311 main.EasyConfig INFO Checking OS dependencies | |
== 2013-12-11 22:08:17,311 main.EasyConfig INFO OS dependencies ok: [] | |
== 2013-12-11 22:08:17,311 main.EasyConfig INFO Checking skipsteps | |
== 2013-12-11 22:08:17,311 main.EasyConfig INFO Checking build option lists | |
== 2013-12-11 22:08:17,312 main.EasyConfig INFO Checking licenses | |
== 2013-12-11 22:08:17,312 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: Mandatory license not enforced | |
== 2013-12-11 22:08:17,312 main.module_generator DEBUG Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x209e5d0> (eb_ns: False) | |
== 2013-12-11 22:08:17,312 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:17,313 main.module_generator DEBUG Module name Python/2.7.5 validated | |
== 2013-12-11 22:08:17,313 main.module_generator DEBUG Obtained module name Python/2.7.5 | |
== 2013-12-11 22:08:17,313 main.EasyConfig DEBUG Parsing ('bzip2', '1.0.6') as a dependency | |
== 2013-12-11 22:08:17,314 main.EasyConfig DEBUG Parsing ('zlib', '1.2.8') as a dependency | |
== 2013-12-11 22:08:17,314 main.EasyConfig DEBUG Parsing ('libreadline', '6.2') as a dependency | |
== 2013-12-11 22:08:17,314 main.EasyConfig DEBUG Parsing ('ncurses', '5.9') as a dependency | |
== 2013-12-11 22:08:17,314 main DEBUG Adding dependency {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} for app Python. | |
== 2013-12-11 22:08:17,315 main DEBUG Adding dependency {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} for app Python. | |
== 2013-12-11 22:08:17,315 main DEBUG Adding dependency {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} for app Python. | |
== 2013-12-11 22:08:17,315 main DEBUG Adding dependency {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} for app Python. | |
== 2013-12-11 22:08:17,316 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgmvapich2 | |
== 2013-12-11 22:08:17,319 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gmacml | |
== 2013-12-11 22:08:17,322 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gcc | |
== 2013-12-11 22:08:17,322 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gmvolf | |
== 2013-12-11 22:08:17,322 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgmpich | |
== 2013-12-11 22:08:17,323 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.iiqmpi | |
== 2013-12-11 22:08:17,323 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.dummy | |
== 2013-12-11 22:08:17,324 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.goalf | |
== 2013-12-11 22:08:17,324 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.goolf | |
== 2013-12-11 22:08:17,325 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gmpolf | |
== 2013-12-11 22:08:17,325 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgoolf | |
== 2013-12-11 22:08:17,325 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gqacml | |
== 2013-12-11 22:08:17,326 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.ictce | |
== 2013-12-11 22:08:17,327 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gompi | |
== 2013-12-11 22:08:17,327 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgompi | |
== 2013-12-11 22:08:17,327 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.ismkl | |
== 2013-12-11 22:08:17,327 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gmvapich2 | |
== 2013-12-11 22:08:17,328 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.iccifort | |
== 2013-12-11 22:08:17,328 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.iqacml | |
== 2013-12-11 22:08:17,328 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gmpich2 | |
== 2013-12-11 22:08:17,329 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.impmkl | |
== 2013-12-11 22:08:17,329 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gcccuda | |
== 2013-12-11 22:08:17,330 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.clanggcc | |
== 2013-12-11 22:08:17,330 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgmpolf | |
== 2013-12-11 22:08:17,330 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.iomkl | |
== 2013-12-11 22:08:17,330 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.goolfc | |
== 2013-12-11 22:08:17,331 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.gimkl | |
== 2013-12-11 22:08:17,331 main.tools.utilities.<module> DEBUG importing module easybuild.toolchains.cgmvolf | |
== 2013-12-11 22:08:17,332 main.search_toolchain.search_toolchain DEBUG Adding ClangGcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,332 main.search_toolchain.search_toolchain DEBUG Adding Mvapich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Found constant CLANGGCC ('ClangGCC') in module easybuild.toolchains.clanggcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Found constant MVAPICH2 ('MVAPICH2') in module easybuild.toolchains.mpi.mvapich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Adding Acml to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,333 main.search_toolchain.search_toolchain DEBUG Adding Mvapich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,334 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,334 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,334 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,334 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,334 main.search_toolchain.search_toolchain DEBUG Found constant MVAPICH2 ('MVAPICH2') in module easybuild.toolchains.mpi.mvapich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,335 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,335 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,335 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,335 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,335 main.search_toolchain.search_toolchain DEBUG Adding Mvapich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,336 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,336 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,336 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,336 main.search_toolchain.search_toolchain DEBUG Found constant MVAPICH2 ('MVAPICH2') in module easybuild.toolchains.mpi.mvapich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,336 main.search_toolchain.search_toolchain DEBUG Adding ClangGcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Adding Mpich to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Found constant CLANGGCC ('ClangGCC') in module easybuild.toolchains.clanggcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Found constant MPICH ('MPICH') in module easybuild.toolchains.mpi.mpich, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_MPICH ('MPI_TYPE_MPICH') in module easybuild.toolchains.mpi.mpich, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,337 main.search_toolchain.search_toolchain DEBUG Adding QLogicMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,338 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,338 main.search_toolchain.search_toolchain DEBUG Found constant QLOGICMPI ('QLogicMPI') in module easybuild.toolchains.mpi.qlogicmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,338 main.search_toolchain.search_toolchain DEBUG Adding Atlas to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,338 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,338 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,339 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,339 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,339 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,339 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,339 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,340 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,341 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,341 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,341 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,341 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,341 main.search_toolchain.search_toolchain DEBUG Adding Mpich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,342 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,342 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,342 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,342 main.search_toolchain.search_toolchain DEBUG Found constant MPICH2 ('MPICH2') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,342 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_MPICH ('MPI_TYPE_MPICH') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding Cgompi to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding Acml to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,343 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,344 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,344 main.search_toolchain.search_toolchain DEBUG Adding QLogicMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,344 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,344 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,344 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,345 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,345 main.search_toolchain.search_toolchain DEBUG Found constant QLOGICMPI ('QLogicMPI') in module easybuild.toolchains.mpi.qlogicmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,345 main.search_toolchain.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,345 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,345 main.search_toolchain.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Adding IntelMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Found constant INTELMPI ('IntelMPI') in module easybuild.toolchains.mpi.intelmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,346 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,347 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,347 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,347 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,347 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,347 main.search_toolchain.search_toolchain DEBUG Adding ClangGcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,348 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,348 main.search_toolchain.search_toolchain DEBUG Found constant CLANGGCC ('ClangGCC') in module easybuild.toolchains.clanggcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,348 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,348 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,348 main.search_toolchain.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Adding Mpich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,349 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,350 main.search_toolchain.search_toolchain DEBUG Found constant MPICH2 ('MPICH2') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,350 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_MPICH ('MPI_TYPE_MPICH') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,350 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,350 main.search_toolchain.search_toolchain DEBUG Adding Mvapich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,350 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,351 main.search_toolchain.search_toolchain DEBUG Found constant MVAPICH2 ('MVAPICH2') in module easybuild.toolchains.mpi.mvapich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,351 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,351 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,351 main.search_toolchain.search_toolchain DEBUG Adding Acml to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,351 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Adding QLogicMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.acml, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,352 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,353 main.search_toolchain.search_toolchain DEBUG Found constant QLOGICMPI ('QLogicMPI') in module easybuild.toolchains.mpi.qlogicmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,353 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,353 main.search_toolchain.search_toolchain DEBUG Adding Mpich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,353 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,353 main.search_toolchain.search_toolchain DEBUG Found constant MPICH2 ('MPICH2') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,354 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_MPICH ('MPI_TYPE_MPICH') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,354 main.search_toolchain.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,354 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,354 main.search_toolchain.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,354 main.search_toolchain.search_toolchain DEBUG Adding Mpich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Found constant MPICH2 ('MPICH2') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_MPICH ('MPI_TYPE_MPICH') in module easybuild.toolchains.mpi.mpich2, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,355 main.search_toolchain.search_toolchain DEBUG Adding Cuda to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,356 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,356 main.search_toolchain.search_toolchain DEBUG Found constant CUDA ('CUDA') in module easybuild.toolchains.compiler.cuda, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,356 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,356 main.search_toolchain.search_toolchain DEBUG Adding Clang to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,356 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,357 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,357 main.search_toolchain.search_toolchain DEBUG Adding Cgmpich to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,357 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,357 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,357 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Adding IntelIccIfort to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.compiler.inteliccifort, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,358 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,359 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,359 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,359 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,359 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,359 main.search_toolchain.search_toolchain DEBUG Adding GccCUDA to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,360 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,360 main.search_toolchain.search_toolchain DEBUG Adding OpenMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,360 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,360 main.search_toolchain.search_toolchain DEBUG Found constant MPI_TYPE_OPENMPI ('MPI_TYPE_OPENMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,360 main.search_toolchain.search_toolchain DEBUG Found constant OPENMPI ('OpenMPI') in module easybuild.toolchains.mpi.openmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Adding Gcc to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Adding IntelFFTW to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Adding IntelMKL to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Adding IntelMPI to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.compiler.gcc, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,361 main.search_toolchain.search_toolchain DEBUG Found constant GCC ('GCC') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,362 main.search_toolchain.search_toolchain DEBUG Found constant INTELCOMP ('Intel') in module easybuild.toolchains.linalg.intelmkl, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,362 main.search_toolchain.search_toolchain DEBUG Found constant INTELMPI ('IntelMPI') in module easybuild.toolchains.mpi.intelmpi, adding it to easybuild.tools.toolchain | |
== 2013-12-11 22:08:17,362 main.search_toolchain.search_toolchain DEBUG Adding Cgmvapich2 to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,362 main.search_toolchain.search_toolchain DEBUG Adding Fftw to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,362 main.search_toolchain.search_toolchain DEBUG Adding OpenBLAS to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,363 main.search_toolchain.search_toolchain DEBUG Adding ScaLAPACK to list of imported classes used for looking for constants | |
== 2013-12-11 22:08:17,377 main.ToolchainOptions DEBUG _add_options: adding options {'usempi': (False, 'Use MPI compiler as default compiler')} | |
== 2013-12-11 22:08:17,378 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICXX defined, but allowed | |
== 2013-12-11 22:08:17,378 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF90 defined, but allowed | |
== 2013-12-11 22:08:17,378 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF77 defined, but allowed | |
== 2013-12-11 22:08:17,378 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICC defined, but allowed | |
== 2013-12-11 22:08:17,378 main.Goolf DEBUG _set_mpi_options: all current options {'usempi': False} | |
== 2013-12-11 22:08:17,380 main.Lmod DEBUG self.mod_paths set based on $MODULEPATH: ['/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:08:17,380 main.Lmod INFO Prepended list of module paths with path used by EasyBuild: /import/bc2/soft/centos6/modules/all | |
== 2013-12-11 22:08:17,380 main.Lmod INFO $MODULEPATH set based on list of module paths: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,380 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:08:17,381 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:08:17,381 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,381 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,381 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:17,494 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:17,568 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:08:17,569 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,570 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,570 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:17,665 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:17,666 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,666 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,667 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:17,765 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:17,766 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,766 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,767 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:17,866 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:17,866 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,867 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,867 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:17,966 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:17,966 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:17,967 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:17,967 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,066 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,067 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,067 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,068 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,164 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,165 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,166 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,166 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,267 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,267 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,268 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,268 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,364 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,365 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,366 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,366 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,462 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,463 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,464 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,464 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,564 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,565 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,565 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,566 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,664 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,665 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,666 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,666 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,764 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,765 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,766 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,766 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,866 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,867 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,867 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,868 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:18,964 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:18,964 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:18,964 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:18,965 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:19,064 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:19,065 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:19,066 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:19,066 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:19,166 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:19,167 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:19,167 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:19,167 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:19,264 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:21,555 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:08:21,580 main.ToolchainOptions DEBUG _add_options: adding options {'precise': (False, 'High precision'), 'verbose': (False, 'Verbose output'), 'pic': (False, 'Use PIC'), 'static': (False, 'Build static library'), 'optarch': (True, 'Enable architecture optimizations'), 'veryloose': (False, 'Very loose precision'), 'strict': (False, 'Strict (highest) precision'), 'unroll': (False, 'Unroll loops'), 'lowopt': (False, 'Low compiler optimizations'), 'shared': (False, 'Build shared library'), 'opt': (False, 'High compiler optimizations'), 'i8': (False, 'Integers are 8 byte integers'), 'loose': (False, 'Loose precision'), 'cstd': (None, 'Specify C standard'), 'defaultprec': (False, 'Default precision'), 'openmp': (False, 'Enable OpenMP'), 'noopt': (False, 'Disable compiler optimizations'), 'packed-linker-options': (False, 'Pack the linker options as comma separated list'), 'r8': (False, 'Real is 8 byte real'), 'cciscxx': (False, 'Use CC as CXX'), '32bit': (False, 'Compile 32bit target'), 'debug': (False, 'Enable debug'), 'defaultopt': (False, 'Default compiler optimizations')} | |
== 2013-12-11 22:08:21,581 main.ToolchainOptions DEBUG _add_options: adding options {'f2c': (False, 'Generate code compatible with f2c and f77'), 'lto': (False, 'Enable Link Time Optimization'), 'loop': (False, 'Automatic loop parallellisation')} | |
== 2013-12-11 22:08:21,583 main.Goolf INFO _get_optimal_architecture: using march=native as optarch for Intel. | |
== 2013-12-11 22:08:21,584 main.Goolf DEBUG _compiler_set_options: compiler toolchain options {'precise': False, 'verbose': False, 'pic': False, 'static': False, 'optarch': True, 'usempi': False, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'f2c': False, 'noopt': False, 'packed-linker-options': False, 'lto': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False, 'loop': False} | |
== 2013-12-11 22:08:21,584 main DEBUG Adding toolchain {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} as dependency for app Python. | |
== 2013-12-11 22:08:21,586 main INFO resolving dependencies ... | |
== 2013-12-11 22:08:21,587 main.Lmod DEBUG self.mod_paths set based on $MODULEPATH: ['/import/bc2/soft/centos6/modules/all', '/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:08:21,587 main.Lmod INFO Prepended list of module paths with path used by EasyBuild: /import/bc2/soft/centos6/modules/all | |
== 2013-12-11 22:08:21,587 main.Lmod INFO $MODULEPATH set based on list of module paths: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:21,588 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:08:21,588 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:08:21,588 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:21,588 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:21,588 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:21,671 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:21,738 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:08:21,739 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:21,739 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:21,740 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:21,837 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:21,838 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:21,838 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:21,839 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:21,922 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:21,923 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:21,924 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:21,924 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,028 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,028 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,029 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,029 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,127 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,127 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,127 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,128 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,226 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,226 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,227 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,227 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,325 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,326 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,327 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,327 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,427 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,428 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,429 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,429 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,527 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,528 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,529 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,529 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,630 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,630 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,631 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,631 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,731 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,732 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,733 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,733 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,833 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,834 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,834 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,835 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:22,936 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:22,937 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:22,937 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:22,938 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,036 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:23,036 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:23,037 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:23,037 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,142 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:23,142 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:23,143 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:23,143 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,243 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:23,244 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:23,244 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:23,244 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,339 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:23,340 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:23,340 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:23,341 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,438 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:23,439 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:23,440 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:23,440 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:23,542 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:25,845 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:08:25,860 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:25,860 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:25,860 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail ' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,216 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,221 main.Lmod DEBUG 'module available ' gave 76 answers: ['ABySS/1.3.6', 'ATLAS/3.10.1', 'BLAST/2.2.28', 'BWA/0.7.4', 'BWA/0.7.5a', 'BamTools/2.2.3', 'BamTools/2.3.0', 'Boost/1.49.0', 'Boost/1.51.0', 'Boost/1.53.0', 'Bowtie/1.0.0', 'Bowtie2/2.0.2', 'Bowtie2/2.1.0', 'CAP3/intel-x86_64_12-21-2007', 'CAP3/opteron-12-21-2007', 'CMake/2.8.12', 'CMake/2.8.4', 'ClustalW2/2.1', 'Cufflinks/2.1.1', 'EasyBuild/1.8.2', 'EasyBuild/1.9.0', 'EasyBuild/1.9.0-testing', 'Eigen/2.0.17', 'Eigen/3.1.4', 'FASTX-Toolkit/0.0.13.2', 'FFTW/2.1.5', 'FFTW/3.3.3', 'GCC/4.7.2', 'GLib/2.34.3', 'GROMACS/4.6.4', 'GSL/1.15', 'HDF5/1.8.11', 'HMMER/3.1b1', 'JUnit/4.11', 'Java/1.7.0_21', 'LAPACK/3.4.2', 'LibTIFF/4.0.3', 'Mercurial/2.5.2', 'OpenBLAS/0.2.6', 'OpenBabel/2.3.2', 'OpenMPI/1.6.4', 'OpenStructure/1.3.3', 'PLINK/1.07', 'Perl/5.16.3', 'Python/2.7.5', 'Qt/4.8.5', 'R/3.0.2', 'SAMtools/0.1.18', 'SAMtools/0.1.19', 'SOAPdenovo2/r240', 'ScaLAPACK/2.0.2', 'Szip/2.1', 'Tcl/8.5.14', 'TopHat/2.0.10', 'Trinity/20131110', 'Velvet/1.2.10', 'ant/1.9.0', 'bzip2/1.0.6', 'cURL/7.29.0', 'expat/2.1.0', 'gettext/0.18.2', 'git/1.8.3.1', 'gompi/1.4.10', 'google-sparsehash/2.0.2', 'goolf/1.4.10', 'hwloc/1.6.2', 'libffi/3.0.13', 'libgtextutils/0.6.1', 'libpng/1.6.6', 'libreadline/6.2', 'libxml2/2.9.1', 'lmod/lmod', 'ncurses/5.9', 'picard/1.103', 'settarg/settarg', 'zlib/1.2.8'] | |
== 2013-12-11 22:08:28,226 main DEBUG unprocessed before resolving deps: [{'unresolved_deps': [{'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'}, {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'}, {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'}, {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'}, {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True}], 'module': 'Python/2.7.5', 'dependencies': [{'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'}, {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'}, {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'}, {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'}, {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True}], 'ec': <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x209e5d0>, 'spec': '/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb', 'builddependencies': []}] | |
== 2013-12-11 22:08:28,226 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} (eb_ns: False) | |
== 2013-12-11 22:08:28,226 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:28,227 main.module_generator DEBUG Module name bzip2/1.0.6 validated | |
== 2013-12-11 22:08:28,228 main.module_generator DEBUG Obtained module name bzip2/1.0.6 | |
== 2013-12-11 22:08:28,228 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} (eb_ns: False) | |
== 2013-12-11 22:08:28,228 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:28,229 main.module_generator DEBUG Module name zlib/1.2.8 validated | |
== 2013-12-11 22:08:28,229 main.module_generator DEBUG Obtained module name zlib/1.2.8 | |
== 2013-12-11 22:08:28,229 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} (eb_ns: False) | |
== 2013-12-11 22:08:28,229 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:28,230 main.module_generator DEBUG Module name libreadline/6.2 validated | |
== 2013-12-11 22:08:28,230 main.module_generator DEBUG Obtained module name libreadline/6.2 | |
== 2013-12-11 22:08:28,230 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} (eb_ns: False) | |
== 2013-12-11 22:08:28,231 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:28,231 main.module_generator DEBUG Module name ncurses/5.9 validated | |
== 2013-12-11 22:08:28,232 main.module_generator DEBUG Obtained module name ncurses/5.9 | |
== 2013-12-11 22:08:28,232 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:08:28,232 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:28,233 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:08:28,233 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:08:28,233 main DEBUG Adding easyconfig /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb to final list | |
== 2013-12-11 22:08:28,233 main DEBUG unprocessed after resolving deps: [] | |
== 2013-12-11 22:08:28,234 main INFO Dependency resolution complete, building as follows: | |
[{'unresolved_deps': [{'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'}, {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'}, {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'}, {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'}, {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True}], 'module': 'Python/2.7.5', 'dependencies': [], 'ec': <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x209e5d0>, 'spec': '/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb', 'builddependencies': []}] | |
== 2013-12-11 22:08:28,234 main INFO processing EasyBuild easyconfig /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb | |
== 2013-12-11 22:08:28,234 main INFO Resetting environment | |
== 2013-12-11 22:08:28,234 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable006_ (L2JpbzovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9jaGVtOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2NvbXBpbGVyOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2RhdGE6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvZGV2ZWw6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbGFuZzovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9saWI6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbWF0aDovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9tcGk6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbnVtbGliOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVz) | |
== 2013-12-11 22:08:28,234 main.environment INFO Environment variable _ModuleTable006_ set to 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 | |
== 2013-12-11 22:08:28,235 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable003_ (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) | |
== 2013-12-11 22:08:28,235 main.environment INFO Environment variable _ModuleTable003_ set to 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 | |
== 2013-12-11 22:08:28,235 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable004_ (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) | |
== 2013-12-11 22:08:28,235 main.environment INFO Environment variable _ModuleTable004_ set to czYvbW9kdWxlcy9iYXNlIiwiL2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvYmlvIiwiL2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvY2hlbSIsIi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2NvbXBpbGVyIiwiL2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvZGF0YSIsIi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2RldmVsIiwiL2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbGFuZyIsIi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2xpYiIsIi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL21hdGgiLCIvaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9tcGkiLCIvaW1w | |
== 2013-12-11 22:08:28,235 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable005_ (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) | |
== 2013-12-11 22:08:28,236 main.environment INFO Environment variable _ModuleTable005_ set to 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 | |
== 2013-12-11 22:08:28,236 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable007_ (L3N5c3RlbTovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy90b29sY2hhaW46L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdG9vbHM6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdmlzOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9zb2Z0d2FyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsWyJ2ZXJzaW9uIl09Mix9) | |
== 2013-12-11 22:08:28,236 main.environment INFO Environment variable _ModuleTable007_ set to L3N5c3RlbTovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy90b29sY2hhaW46L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdG9vbHM6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdmlzOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9zb2Z0d2FyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsWyJ2ZXJzaW9uIl09Mix9 | |
== 2013-12-11 22:08:28,240 main.easyblock.<module> WARNING Deprecated functionality, will no longer work in v2.0: Determine module path based on software name | |
== 2013-12-11 22:08:28,240 main.easyblock.<module> DEBUG getting class for easybuild.easyblocks.python.EB_Python | |
== 2013-12-11 22:08:28,242 main.easyblock.<module> INFO Successfully obtained EB_Python class instance from easybuild.easyblocks.python | |
== 2013-12-11 22:08:28,243 main.Lmod DEBUG self.mod_paths set based on $MODULEPATH: ['/import/bc2/soft/centos6/modules/all', '/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:08:28,243 main.Lmod INFO Prepended list of module paths with path used by EasyBuild: /import/bc2/soft/centos6/modules/all | |
== 2013-12-11 22:08:28,243 main.Lmod INFO $MODULEPATH set based on list of module paths: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,244 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:08:28,244 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:08:28,244 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,244 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,244 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,331 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,396 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:08:28,397 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,397 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,397 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,496 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,497 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,497 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,498 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,581 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,582 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,582 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,583 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,683 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,683 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,684 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,684 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,785 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,785 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,786 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,786 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,887 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,887 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,888 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,888 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:28,987 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:28,987 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:28,988 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:28,988 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,086 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,087 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,087 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,088 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,187 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,188 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,188 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,188 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,286 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,287 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,287 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,288 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,386 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,387 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,387 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,388 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,485 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,486 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,486 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,487 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,586 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,587 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,587 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,587 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,687 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,687 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,688 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,688 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,786 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,787 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,787 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,787 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,886 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,886 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,887 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,887 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:29,987 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:29,987 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:29,988 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:29,988 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:30,086 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:30,087 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:30,087 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:30,087 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:30,186 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:32,477 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:08:32,479 main.EasyConfig INFO Obtained list of valid module classes: ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis', 'geo', 'lang', 'toolchain'] | |
== 2013-12-11 22:08:32,480 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:08:32,480 main.EasyConfig DEBUG List of valid stops obtained: ['fetch', 'ready', 'source', 'patch', 'prepare', 'configure', 'build', 'test', 'install', 'extensions', 'package', 'postproc', 'sanitycheck', 'cleanup', 'module', 'testcases'] | |
== 2013-12-11 22:08:32,481 main.EasyConfigParser DEBUG Process filename /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb with get function (<function read_file at 0x1c0dde8>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb',)), set function (<function write_file at 0x1c0de60>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb', None)) | |
== 2013-12-11 22:08:32,482 main.EasyConfigParser DEBUG No version found, using default 1.0 | |
== 2013-12-11 22:08:32,483 main.FormatOneZero DEBUG No section found. | |
== 2013-12-11 22:08:32,483 main.FormatOneZero DEBUG Found header # Built with 1.9.0 on 2013-11-29_00-48-54 | |
== 2013-12-11 22:08:32,483 main.easyconfig.format.pyheaderconfigobj WARNING Deprecated functionality, will no longer work in v2.0: Magic 'global' easyconfigs variables like shared_lib_ext should no longer be used | |
== 2013-12-11 22:08:32,484 main.FormatOneZero DEBUG pyheader initial global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:08:32,484 main.FormatOneZero DEBUG pyheader initial local_vars {} | |
== 2013-12-11 22:08:32,484 main.FormatOneZero DEBUG pyheader text being exec'ed: name = 'Python' | |
version = '2.7.5' | |
homepage = 'http://python.org/' | |
description = "Python is a programming language that lets you work more quickly and integrate your systems more effectively." | |
toolchain = {'name': 'goolf', 'version': '1.4.10'} | |
toolchainopts = {'pic': True, 'opt': True, 'optarch': True} | |
numpyversion = '1.7.0' | |
scipyversion = '0.12.0' | |
source_urls = ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
sources = ['%(name)s-%(version)s.tgz'] | |
patches = ['python-%(version)s_libffi_int128_icc.patch'] | |
# python needs bzip2 to build the bz2 package | |
dependencies = [ | |
('bzip2', '1.0.6'), | |
('zlib', '1.2.8'), | |
('libreadline', '6.2'), | |
('ncurses', '5.9'), | |
] | |
#sanity_check_paths = { | |
# 'files': [], | |
# 'dirs': ['Bio'], | |
#} | |
# order is important! | |
exts_list = [ | |
('setuptools', '0.6c11', { | |
'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/'], | |
}), | |
('nose', '1.3.0', { | |
'source_urls': ['http://pypi.python.org/packages/source/n/nose/'], | |
}), | |
('numpy', numpyversion, { | |
'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/%s' % numpyversion, 'download')], | |
'patches': [ | |
'numpy-%s_distutils_multiple-lib-dirs.patch' % numpyversion, | |
'numpy-iqacml.patch', | |
], | |
}), | |
('scipy', scipyversion, { | |
'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/%s' % scipyversion, 'download')], | |
}), | |
('mpi4py', '1.3', { | |
'source_urls': ['https://mpi4py.googlecode.com/files/'], | |
}), | |
('paycheck', '1.0.2', { | |
'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/'], | |
}), | |
('argparse', '1.2.1', { | |
'source_urls': ['http://argparse.googlecode.com/files/'], | |
}), | |
('lockfile', '0.9.1', { | |
'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/'], | |
}), | |
('Cython', '0.19.1', { | |
'source_urls': ['http://www.cython.org/release/'], | |
}), | |
('biopython', '1.62', { | |
'source_urls': ['http://biopython.org/DIST'], | |
'options': {'modulename': 'Bio'}, | |
}), | |
] | |
moduleclass = 'lang' | |
# Build statistics | |
buildstats = [{ | |
'easybuild-framework_version': '1.9.0', | |
'easybuild-easyblocks_version': '1.9.0', | |
'host': 'login11', | |
'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', | |
'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', | |
'core_count': 16, | |
'timestamp': 1385682534, | |
'build_time': 845.39, | |
'install_size': 209456294, | |
}] | |
== 2013-12-11 22:08:32,485 main.FormatOneZero DEBUG pyheader final global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', '__builtins__': {'bytearray': <type 'bytearray'>, 'IndexError': <type 'exceptions.IndexError'>, 'all': <built-in function all>, 'help': Type help() for interactive help, or help(object) for help about object., 'vars': <built-in function vars>, 'SyntaxError': <type 'exceptions.SyntaxError'>, 'unicode': <type 'unicode'>, 'UnicodeDecodeError': <type 'exceptions.UnicodeDecodeError'>, 'isinstance': <built-in function isinstance>, 'copyright': Copyright (c) 2001-2010 Python Software Foundation. | |
All Rights Reserved. | |
Copyright (c) 2000 BeOpen.com. | |
All Rights Reserved. | |
Copyright (c) 1995-2001 Corporation for National Research Initiatives. | |
All Rights Reserved. | |
Copyright (c) 1991-1995 Stichting Mathematisch Centrum, Amsterdam. | |
All Rights Reserved., 'NameError': <type 'exceptions.NameError'>, 'BytesWarning': <type 'exceptions.BytesWarning'>, 'dict': <type 'dict'>, 'input': <built-in function input>, 'oct': <built-in function oct>, 'bin': <built-in function bin>, 'SystemExit': <type 'exceptions.SystemExit'>, 'StandardError': <type 'exceptions.StandardError'>, 'format': <built-in function format>, 'repr': <built-in function repr>, 'sorted': <built-in function sorted>, 'False': False, 'RuntimeWarning': <type 'exceptions.RuntimeWarning'>, 'list': <type 'list'>, 'iter': <built-in function iter>, 'reload': <built-in function reload>, 'Warning': <type 'exceptions.Warning'>, '__package__': None, 'round': <built-in function round>, 'dir': <built-in function dir>, 'cmp': <built-in function cmp>, 'set': <type 'set'>, 'bytes': <type 'str'>, 'reduce': <built-in function reduce>, 'intern': <built-in function intern>, 'issubclass': <built-in function issubclass>, 'Ellipsis': Ellipsis, 'EOFError': <type 'exceptions.EOFError'>, 'locals': <built-in function locals>, 'BufferError': <type 'exceptions.BufferError'>, 'slice': <type 'slice'>, 'FloatingPointError': <type 'exceptions.FloatingPointError'>, 'sum': <built-in function sum>, 'getattr': <built-in function getattr>, 'abs': <built-in function abs>, 'exit': Use exit() or Ctrl-D (i.e. EOF) to exit, 'print': <built-in function print>, 'True': True, 'FutureWarning': <type 'exceptions.FutureWarning'>, 'ImportWarning': <type 'exceptions.ImportWarning'>, 'None': None, 'hash': <built-in function hash>, 'ReferenceError': <type 'exceptions.ReferenceError'>, 'len': <built-in function len>, 'credits': Thanks to CWI, CNRI, BeOpen.com, Zope Corporation and a cast of thousands | |
for supporting Python development. See www.python.org for more information., 'frozenset': <type 'frozenset'>, '__name__': '__builtin__', 'ord': <built-in function ord>, 'super': <type 'super'>, 'TypeError': <type 'exceptions.TypeError'>, 'license': See http://www.python.org/2.6/license.html, 'KeyboardInterrupt': <type 'exceptions.KeyboardInterrupt'>, 'UserWarning': <type 'exceptions.UserWarning'>, 'filter': <built-in function filter>, 'range': <built-in function range>, 'staticmethod': <type 'staticmethod'>, 'SystemError': <type 'exceptions.SystemError'>, 'BaseException': <type 'exceptions.BaseException'>, 'pow': <built-in function pow>, 'RuntimeError': <type 'exceptions.RuntimeError'>, 'float': <type 'float'>, 'MemoryError': <type 'exceptions.MemoryError'>, 'StopIteration': <type 'exceptions.StopIteration'>, 'globals': <built-in function globals>, 'divmod': <built-in function divmod>, 'enumerate': <type 'enumerate'>, 'apply': <built-in function apply>, 'LookupError': <type 'exceptions.LookupError'>, 'open': <built-in function open>, 'quit': Use quit() or Ctrl-D (i.e. EOF) to exit, 'basestring': <type 'basestring'>, 'UnicodeError': <type 'exceptions.UnicodeError'>, 'zip': <built-in function zip>, 'hex': <built-in function hex>, 'long': <type 'long'>, 'next': <built-in function next>, 'ImportError': <type 'exceptions.ImportError'>, 'chr': <built-in function chr>, 'xrange': <type 'xrange'>, 'type': <type 'type'>, '__doc__': "Built-in functions, exceptions, and other objects.\n\nNoteworthy: None is the `nil' object; Ellipsis represents `...' in slices.", 'Exception': <type 'exceptions.Exception'>, 'tuple': <type 'tuple'>, 'UnicodeTranslateError': <type 'exceptions.UnicodeTranslateError'>, 'reversed': <type 'reversed'>, 'UnicodeEncodeError': <type 'exceptions.UnicodeEncodeError'>, 'IOError': <type 'exceptions.IOError'>, 'hasattr': <built-in function hasattr>, 'delattr': <built-in function delattr>, 'setattr': <built-in function setattr>, 'raw_input': <built-in function raw_input>, 'SyntaxWarning': <type 'exceptions.SyntaxWarning'>, 'compile': <built-in function compile>, 'ArithmeticError': <type 'exceptions.ArithmeticError'>, 'str': <type 'str'>, 'property': <type 'property'>, 'GeneratorExit': <type 'exceptions.GeneratorExit'>, 'int': <type 'int'>, '__import__': <built-in function __import__>, 'KeyError': <type 'exceptions.KeyError'>, 'coerce': <built-in function coerce>, 'PendingDeprecationWarning': <type 'exceptions.PendingDeprecationWarning'>, 'file': <type 'file'>, 'EnvironmentError': <type 'exceptions.EnvironmentError'>, 'unichr': <built-in function unichr>, 'id': <built-in function id>, 'OSError': <type 'exceptions.OSError'>, 'DeprecationWarning': <type 'exceptions.DeprecationWarning'>, 'min': <built-in function min>, 'UnicodeWarning': <type 'exceptions.UnicodeWarning'>, 'execfile': <built-in function execfile>, 'any': <built-in function any>, 'complex': <type 'complex'>, 'bool': <type 'bool'>, 'ValueError': <type 'exceptions.ValueError'>, 'NotImplemented': NotImplemented, 'map': <built-in function map>, 'buffer': <type 'buffer'>, 'max': <built-in function max>, 'object': <type 'object'>, 'TabError': <type 'exceptions.TabError'>, 'callable': <built-in function callable>, 'ZeroDivisionError': <type 'exceptions.ZeroDivisionError'>, 'eval': <built-in function eval>, '__debug__': True, 'IndentationError': <type 'exceptions.IndentationError'>, 'AssertionError': <type 'exceptions.AssertionError'>, 'classmethod': <type 'classmethod'>, 'UnboundLocalError': <type 'exceptions.UnboundLocalError'>, 'NotImplementedError': <type 'exceptions.NotImplementedError'>, 'AttributeError': <type 'exceptions.AttributeError'>, 'OverflowError': <type 'exceptions.OverflowError'>}, 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:08:32,485 main.FormatOneZero DEBUG pyheader final local_vars {'buildstats': [{'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'build_time': 845.38999999999999, 'timestamp': 1385682534, 'core_count': 16, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'easybuild-easyblocks_version': '1.9.0', 'easybuild-framework_version': '1.9.0'}], 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'Python', 'scipyversion': '0.12.0', 'exts_list': [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'moduleclass': 'lang', 'sources': ['%(name)s-%(version)s.tgz'], 'version': '2.7.5', 'dependencies': [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'source_urls': ['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'toolchainopts': {'opt': True, 'optarch': True, 'pic': True}, 'numpyversion': '1.7.0', 'homepage': 'http://python.org/', 'patches': ['python-%(version)s_libffi_int128_icc.patch'], 'description': 'Python is a programming language that lets you work more quickly and integrate your systems more effectively.'} | |
== 2013-12-11 22:08:32,486 main.FormatOneZero DEBUG No docstring found in local_vars | |
== 2013-12-11 22:08:32,487 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:08:32,488 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,489 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:08:32,489 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:08:32,489 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,489 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,490 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,491 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:08:32,492 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:08:32,492 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,492 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,492 main.EasyConfig INFO setting config option buildstats: value [{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}] | |
== 2013-12-11 22:08:32,493 main.EasyConfig INFO setting config option toolchain: value {'version': '1.4.10', 'name': 'goolf'} | |
== 2013-12-11 22:08:32,493 main.EasyConfig INFO setting config option name: value Python | |
== 2013-12-11 22:08:32,493 main.EasyConfig DEBUG Ignoring unknown config option scipyversion (value: 0.12.0) | |
== 2013-12-11 22:08:32,494 main.EasyConfig INFO setting config option exts_list: value [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})] | |
== 2013-12-11 22:08:32,494 main.EasyConfig INFO setting config option moduleclass: value lang | |
== 2013-12-11 22:08:32,494 main.easyconfig.easyconfig WARNING Unable to resolve template value %(name)s-%(version)s.tgz with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:32,494 main.EasyConfig INFO setting config option sources: value ['%(name)s-%(version)s.tgz'] | |
== 2013-12-11 22:08:32,494 main.EasyConfig INFO setting config option version: value 2.7.5 | |
== 2013-12-11 22:08:32,495 main.EasyConfig INFO setting config option dependencies: value [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')] | |
== 2013-12-11 22:08:32,495 main.easyconfig.easyconfig WARNING Unable to resolve template value http://www.python.org/ftp/%(namelower)s/%(version)s/ with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:32,495 main.EasyConfig INFO setting config option source_urls: value ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
== 2013-12-11 22:08:32,495 main.EasyConfig INFO setting config option toolchainopts: value {'opt': True, 'optarch': True, 'pic': True} | |
== 2013-12-11 22:08:32,496 main.EasyConfig DEBUG Ignoring unknown config option numpyversion (value: 1.7.0) | |
== 2013-12-11 22:08:32,496 main.EasyConfig INFO setting config option homepage: value http://python.org/ | |
== 2013-12-11 22:08:32,496 main.easyconfig.easyconfig WARNING Unable to resolve template value python-%(version)s_libffi_int128_icc.patch with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:08:32,496 main.EasyConfig INFO setting config option patches: value ['python-%(version)s_libffi_int128_icc.patch'] | |
== 2013-12-11 22:08:32,496 main.EasyConfig INFO setting config option description: value Python is a programming language that lets you work more quickly and integrate your systems more effectively. | |
== 2013-12-11 22:08:32,498 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,499 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,499 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,499 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,500 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,500 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,500 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,500 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,501 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,503 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,503 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,503 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,503 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,503 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,504 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,504 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,504 main.EasyConfig INFO Validating easy block | |
== 2013-12-11 22:08:32,504 main.EasyConfig INFO Checking OS dependencies | |
== 2013-12-11 22:08:32,505 main.EasyConfig INFO OS dependencies ok: [] | |
== 2013-12-11 22:08:32,505 main.EasyConfig INFO Checking skipsteps | |
== 2013-12-11 22:08:32,505 main.EasyConfig INFO Checking build option lists | |
== 2013-12-11 22:08:32,505 main.EasyConfig INFO Checking licenses | |
== 2013-12-11 22:08:32,505 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: Mandatory license not enforced | |
== 2013-12-11 22:08:32,507 main.EB_Python INFO This is EasyBuild 1.9.0 (framework: 1.9.0, easyblocks: 1.9.0) on host login10. | |
== 2013-12-11 22:08:32,508 main.EB_Python INFO Init completed for application name Python version 2.7.5 | |
== 2013-12-11 22:08:32,508 main INFO Obtained application instance of for Python (easyblock: None) | |
== 2013-12-11 22:08:32,508 main DEBUG Skip set to True | |
== 2013-12-11 22:08:32,508 main.module_generator DEBUG Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x20e6a10> (eb_ns: False) | |
== 2013-12-11 22:08:32,509 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:32,510 main.module_generator DEBUG Module name Python/2.7.5 validated | |
== 2013-12-11 22:08:32,510 main.module_generator DEBUG Obtained module name Python/2.7.5 | |
== 2013-12-11 22:08:32,510 main.EB_Python INFO building and installing Python/2.7.5... | |
== 2013-12-11 22:08:32,510 main.EB_Python INFO fetching files... | |
== 2013-12-11 22:08:32,511 main.EB_Python INFO Starting fetch step | |
== 2013-12-11 22:08:32,512 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,514 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,514 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,514 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,515 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,515 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,515 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,516 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,517 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,519 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,519 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,519 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,520 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,520 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,520 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,520 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,521 main.EB_Python INFO Running method fetch_step part of step fetch | |
== 2013-12-11 22:08:32,521 main.EB_Python WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2013-12-11 22:08:32,521 main.filetools DEBUG run_cmd: running cmd which eb (in /import/bc2/soft/centos6/installed_eb_files/Python) | |
== 2013-12-11 22:08:32,528 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:08:32,529 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:08:32,530 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:08:32,531 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,531 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,532 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:08:32,533 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,533 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,534 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,535 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,535 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:08:32,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,540 main.EB_Python INFO Found file Python-2.7.5.tgz at /import/bc2/soft/centos6/source/p/Python/Python-2.7.5.tgz | |
== 2013-12-11 22:08:32,540 main.EB_Python DEBUG File /import/bc2/soft/centos6/source/p/Python/Python-2.7.5.tgz found for source Python-2.7.5.tgz | |
== 2013-12-11 22:08:32,541 main.EB_Python INFO Added sources: [{'path': '/import/bc2/soft/centos6/source/p/Python/Python-2.7.5.tgz', 'cmd': None, 'name': 'Python-2.7.5.tgz'}] | |
== 2013-12-11 22:08:32,541 main.filetools DEBUG run_cmd: running cmd which eb (in /import/bc2/soft/centos6/installed_eb_files/Python) | |
== 2013-12-11 22:08:32,549 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:08:32,550 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:08:32,551 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:08:32,551 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,552 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,552 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:08:32,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,558 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,558 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,558 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,558 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,559 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,559 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:08:32,559 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,560 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,560 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:08:32,560 main.EB_Python INFO Found file python-2.7.5_libffi_int128_icc.patch at /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/python-2.7.5_libffi_int128_icc.patch | |
== 2013-12-11 22:08:32,561 main.EB_Python DEBUG File /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/python-2.7.5_libffi_int128_icc.patch found for patch python-2.7.5_libffi_int128_icc.patch | |
== 2013-12-11 22:08:32,561 main.EB_Python INFO Added patches: [{'path': '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/python-2.7.5_libffi_int128_icc.patch', 'name': 'python-2.7.5_libffi_int128_icc.patch'}] | |
== 2013-12-11 22:08:32,564 main.affinity.<module> DEBUG sched_getaffinity for pid 4218 returned cpuset 0-15 | |
== 2013-12-11 22:08:32,564 main.filetools DEBUG run_cmd: running cmd ulimit -u (in /import/bc2/soft/centos6/installed_eb_files/Python) | |
== 2013-12-11 22:08:32,571 main.filetools DEBUG cmd "ulimit -u" exited with exitcode 0 and output: | |
1024 | |
== 2013-12-11 22:08:32,571 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:08:32,572 main.EB_Python INFO Setting parallelism: 16 | |
== 2013-12-11 22:08:32,572 main.EB_Python INFO Checking dirs that need to be created: ['/import/bc2/soft/centos6/software/Python', '/import/bc2/soft/centos6/modules/all/Python', '/import/bc2/soft/centos6/modules/lang/Python'] | |
== 2013-12-11 22:08:32,572 main.EB_Python DEBUG Not creating /import/bc2/soft/centos6/software/Python, it already exists. | |
== 2013-12-11 22:08:32,573 main.EB_Python DEBUG Not creating /import/bc2/soft/centos6/modules/all/Python, it already exists. | |
== 2013-12-11 22:08:32,573 main.EB_Python DEBUG Not creating /import/bc2/soft/centos6/modules/lang/Python, it already exists. | |
== 2013-12-11 22:08:32,573 main.EB_Python INFO creating build dir, resetting environment... | |
== 2013-12-11 22:08:32,573 main.EB_Python INFO Starting ready step | |
== 2013-12-11 22:08:32,575 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,577 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,578 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,578 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,578 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,579 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,579 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,580 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,582 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:32,584 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,585 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,585 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:32,586 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:32,586 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:32,587 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:32,587 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:32,587 main.EB_Python INFO Running method check_readiness_step part of step ready | |
== 2013-12-11 22:08:32,588 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:32,588 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:32,588 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse list' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:32,659 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:32,660 main.EB_Python WARNING Loaded modules detected: ['EasyBuild/1.9.0'] | |
== 2013-12-11 22:08:32,664 main.search_toolchain.search_toolchain DEBUG Skipping importing of toolchain modules, processing of toolchain constants is already done. | |
== 2013-12-11 22:08:32,669 main.ToolchainOptions DEBUG _add_options: adding options {'usempi': (False, 'Use MPI compiler as default compiler')} | |
== 2013-12-11 22:08:32,669 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICXX defined, but allowed | |
== 2013-12-11 22:08:32,669 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF90 defined, but allowed | |
== 2013-12-11 22:08:32,669 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF77 defined, but allowed | |
== 2013-12-11 22:08:32,670 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICC defined, but allowed | |
== 2013-12-11 22:08:32,670 main.Goolf DEBUG _set_mpi_options: all current options {'usempi': False} | |
== 2013-12-11 22:08:32,671 main.Lmod DEBUG self.mod_paths set based on $MODULEPATH: ['/import/bc2/soft/centos6/modules/all', '/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:08:32,672 main.Lmod INFO Prepended list of module paths with path used by EasyBuild: /import/bc2/soft/centos6/modules/all | |
== 2013-12-11 22:08:32,672 main.Lmod INFO $MODULEPATH set based on list of module paths: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:32,673 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:08:32,673 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:08:32,673 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:32,673 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:32,674 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:32,760 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:32,827 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:08:32,828 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:32,829 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:32,830 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:32,930 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:32,931 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:32,932 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:32,933 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,019 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,020 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,020 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,021 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,122 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,123 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,123 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,124 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,224 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,226 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,226 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,227 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,323 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,324 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,324 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,325 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,425 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,426 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,427 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,427 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,526 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,527 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,527 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,528 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,626 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,627 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,628 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,628 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,726 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,727 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,727 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,728 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,826 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,827 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,828 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,829 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:33,932 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:33,933 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:33,934 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:33,934 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,035 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,036 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,036 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,037 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,137 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,137 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,138 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,138 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,236 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,237 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,237 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,238 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,336 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,337 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,337 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,338 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,435 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,436 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,437 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,437 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,535 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:34,536 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:34,537 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:34,537 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:34,635 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:36,927 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:08:36,941 main.ToolchainOptions DEBUG _add_options: adding options {'precise': (False, 'High precision'), 'verbose': (False, 'Verbose output'), 'pic': (False, 'Use PIC'), 'static': (False, 'Build static library'), 'optarch': (True, 'Enable architecture optimizations'), 'veryloose': (False, 'Very loose precision'), 'strict': (False, 'Strict (highest) precision'), 'unroll': (False, 'Unroll loops'), 'lowopt': (False, 'Low compiler optimizations'), 'shared': (False, 'Build shared library'), 'opt': (False, 'High compiler optimizations'), 'i8': (False, 'Integers are 8 byte integers'), 'loose': (False, 'Loose precision'), 'cstd': (None, 'Specify C standard'), 'defaultprec': (False, 'Default precision'), 'openmp': (False, 'Enable OpenMP'), 'noopt': (False, 'Disable compiler optimizations'), 'packed-linker-options': (False, 'Pack the linker options as comma separated list'), 'r8': (False, 'Real is 8 byte real'), 'cciscxx': (False, 'Use CC as CXX'), '32bit': (False, 'Compile 32bit target'), 'debug': (False, 'Enable debug'), 'defaultopt': (False, 'Default compiler optimizations')} | |
== 2013-12-11 22:08:36,942 main.ToolchainOptions DEBUG _add_options: adding options {'f2c': (False, 'Generate code compatible with f2c and f77'), 'lto': (False, 'Enable Link Time Optimization'), 'loop': (False, 'Automatic loop parallellisation')} | |
== 2013-12-11 22:08:36,943 main.Goolf INFO _get_optimal_architecture: using march=native as optarch for Intel. | |
== 2013-12-11 22:08:36,944 main.Goolf DEBUG _compiler_set_options: compiler toolchain options {'precise': False, 'verbose': False, 'pic': False, 'static': False, 'optarch': True, 'usempi': False, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'f2c': False, 'noopt': False, 'packed-linker-options': False, 'lto': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False, 'loop': False} | |
== 2013-12-11 22:08:36,945 main.EasyConfig DEBUG Parsing ('bzip2', '1.0.6') as a dependency | |
== 2013-12-11 22:08:36,945 main.EasyConfig DEBUG Parsing ('zlib', '1.2.8') as a dependency | |
== 2013-12-11 22:08:36,946 main.EasyConfig DEBUG Parsing ('libreadline', '6.2') as a dependency | |
== 2013-12-11 22:08:36,946 main.EasyConfig DEBUG Parsing ('ncurses', '5.9') as a dependency | |
== 2013-12-11 22:08:36,947 main.Goolf DEBUG add_dependencies: adding toolchain dependencies [{'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'}, {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'}, {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'}, {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'}] | |
== 2013-12-11 22:08:36,947 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} (eb_ns: False) | |
== 2013-12-11 22:08:36,947 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:36,949 main.module_generator DEBUG Module name bzip2/1.0.6 validated | |
== 2013-12-11 22:08:36,949 main.module_generator DEBUG Obtained module name bzip2/1.0.6 | |
== 2013-12-11 22:08:36,949 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:36,950 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:36,950 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail bzip2/1.0.6' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:39,298 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:39,299 main.Lmod DEBUG 'module available bzip2/1.0.6' gave 1 answers: ['bzip2/1.0.6'] | |
== 2013-12-11 22:08:39,299 main.Goolf DEBUG add_dependencies: added toolchain dependency {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} | |
== 2013-12-11 22:08:39,299 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} (eb_ns: False) | |
== 2013-12-11 22:08:39,299 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:39,301 main.module_generator DEBUG Module name zlib/1.2.8 validated | |
== 2013-12-11 22:08:39,301 main.module_generator DEBUG Obtained module name zlib/1.2.8 | |
== 2013-12-11 22:08:39,301 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:39,302 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:39,302 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail zlib/1.2.8' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:42,549 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:42,551 main.Lmod DEBUG 'module available zlib/1.2.8' gave 1 answers: ['zlib/1.2.8'] | |
== 2013-12-11 22:08:42,551 main.Goolf DEBUG add_dependencies: added toolchain dependency {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} | |
== 2013-12-11 22:08:42,552 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} (eb_ns: False) | |
== 2013-12-11 22:08:42,553 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:42,555 main.module_generator DEBUG Module name libreadline/6.2 validated | |
== 2013-12-11 22:08:42,556 main.module_generator DEBUG Obtained module name libreadline/6.2 | |
== 2013-12-11 22:08:42,556 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:42,557 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:42,557 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail libreadline/6.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:44,912 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:44,913 main.Lmod DEBUG 'module available libreadline/6.2' gave 1 answers: ['libreadline/6.2'] | |
== 2013-12-11 22:08:44,914 main.Goolf DEBUG add_dependencies: added toolchain dependency {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} | |
== 2013-12-11 22:08:44,915 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} (eb_ns: False) | |
== 2013-12-11 22:08:44,915 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:44,917 main.module_generator DEBUG Module name ncurses/5.9 validated | |
== 2013-12-11 22:08:44,917 main.module_generator DEBUG Obtained module name ncurses/5.9 | |
== 2013-12-11 22:08:44,918 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:44,918 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:44,918 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail ncurses/5.9' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:47,278 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:47,279 main.Lmod DEBUG 'module available ncurses/5.9' gave 1 answers: ['ncurses/5.9'] | |
== 2013-12-11 22:08:47,280 main.Goolf DEBUG add_dependencies: added toolchain dependency {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} | |
== 2013-12-11 22:08:47,281 main.EasyConfig DEBUG Parsing ('bzip2', '1.0.6') as a dependency | |
== 2013-12-11 22:08:47,282 main.EasyConfig DEBUG Parsing ('zlib', '1.2.8') as a dependency | |
== 2013-12-11 22:08:47,282 main.EasyConfig DEBUG Parsing ('libreadline', '6.2') as a dependency | |
== 2013-12-11 22:08:47,283 main.EasyConfig DEBUG Parsing ('ncurses', '5.9') as a dependency | |
== 2013-12-11 22:08:47,284 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:47,285 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:47,285 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail Python/2.7.5' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:49,636 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:49,638 main.Lmod DEBUG 'module available Python/2.7.5' gave 1 answers: ['Python/2.7.5'] | |
== 2013-12-11 22:08:49,638 main.EB_Python INFO Module Python/2.7.5 found. | |
== 2013-12-11 22:08:49,639 main.EB_Python INFO Going to skip actual main build and potential existing extensions. Expert only. | |
== 2013-12-11 22:08:49,639 main.EB_Python INFO Running method gen_installdir part of step ready | |
== 2013-12-11 22:08:49,640 main.EB_Python INFO Running method make_builddir part of step ready | |
== 2013-12-11 22:08:49,641 main.EB_Python DEBUG Creating the build directory /tmp/easybuild/Python/2.7.5/goolf-1.4.10 (cleanup: True) | |
== 2013-12-11 22:08:49,642 main.EB_Python INFO Found old directory /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:08:49,732 main.filetools INFO Path /tmp/easybuild/Python/2.7.5/goolf-1.4.10 successfully removed. | |
== 2013-12-11 22:08:49,733 main.EB_Python INFO Removed old directory /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:08:49,733 main.EB_Python INFO Running method env_reset_changes part of step ready | |
== 2013-12-11 22:08:49,733 main.EB_Python INFO Running method handle_iterate_opts part of step ready | |
== 2013-12-11 22:08:49,734 main.EB_Python INFO unpacking... | |
== 2013-12-11 22:08:49,734 main.EB_Python INFO Skipping source step | |
== 2013-12-11 22:08:49,734 main.EB_Python INFO patching... | |
== 2013-12-11 22:08:49,735 main.EB_Python INFO Skipping patch step | |
== 2013-12-11 22:08:49,735 main.EB_Python INFO preparing... | |
== 2013-12-11 22:08:49,735 main.EB_Python INFO Starting prepare step | |
== 2013-12-11 22:08:49,736 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:49,738 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,739 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,739 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,739 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:49,740 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:49,740 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:49,740 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:49,741 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:08:49,743 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,744 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,744 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:08:49,744 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:08:49,744 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:08:49,745 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:08:49,745 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:08:49,745 main.EB_Python INFO Running method prepare_step part of step prepare | |
== 2013-12-11 22:08:49,746 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:08:49,746 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:49,747 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:08:49,747 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:08:49,748 main.Goolf DEBUG _toolchain_exists: checking for name goolf version 1.4.10 (module: goolf/1.4.10) | |
== 2013-12-11 22:08:49,748 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:49,748 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:49,749 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail goolf/1.4.10' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,105 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,106 main.Lmod DEBUG 'module available goolf/1.4.10' gave 1 answers: ['goolf/1.4.10'] | |
== 2013-12-11 22:08:52,107 main.Goolf DEBUG Loading toolchain module and dependencies... | |
== 2013-12-11 22:08:52,107 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:08:52,108 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:52,111 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:08:52,111 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:08:52,112 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:52,113 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:52,113 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load goolf/1.4.10' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,348 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,349 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} (eb_ns: False) | |
== 2013-12-11 22:08:52,350 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:52,352 main.module_generator DEBUG Module name bzip2/1.0.6 validated | |
== 2013-12-11 22:08:52,353 main.module_generator DEBUG Obtained module name bzip2/1.0.6 | |
== 2013-12-11 22:08:52,354 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} (eb_ns: False) | |
== 2013-12-11 22:08:52,354 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:52,356 main.module_generator DEBUG Module name zlib/1.2.8 validated | |
== 2013-12-11 22:08:52,357 main.module_generator DEBUG Obtained module name zlib/1.2.8 | |
== 2013-12-11 22:08:52,357 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} (eb_ns: False) | |
== 2013-12-11 22:08:52,357 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:52,358 main.module_generator DEBUG Module name libreadline/6.2 validated | |
== 2013-12-11 22:08:52,358 main.module_generator DEBUG Obtained module name libreadline/6.2 | |
== 2013-12-11 22:08:52,359 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} (eb_ns: False) | |
== 2013-12-11 22:08:52,359 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:52,360 main.module_generator DEBUG Module name ncurses/5.9 validated | |
== 2013-12-11 22:08:52,360 main.module_generator DEBUG Obtained module name ncurses/5.9 | |
== 2013-12-11 22:08:52,360 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:52,361 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:52,361 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load bzip2/1.0.6' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,510 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,511 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:52,512 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:52,512 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load zlib/1.2.8' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,661 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,662 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:52,663 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:52,663 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load libreadline/6.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,836 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,837 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:52,838 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:52,839 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load ncurses/5.9' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:52,996 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:52,997 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:08:52,997 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:08:53,000 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:08:53,001 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:08:53,002 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:53,003 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:53,003 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail goolf/1.4.10' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:55,511 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:55,512 main.Lmod DEBUG 'module available goolf/1.4.10' gave 1 answers: ['goolf/1.4.10'] | |
== 2013-12-11 22:08:55,513 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:55,514 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:55,514 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show goolf/1.4.10' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:55,648 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/goolf/1.4.10: | |
---------------------------------------------------------------------------- | |
whatis("Description: GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. - Homepage: (none)") | |
conflict("goolf") | |
setenv("EBROOTGOOLF","/import/bc2/soft/centos6/software/goolf/1.4.10") | |
setenv("EBVERSIONGOOLF","1.4.10") | |
setenv("EBDEVELGOOLF","/import/bc2/soft/centos6/software/goolf/1.4.10/easybuild/goolf-1.4.10-easybuild-devel") | |
help([[ GNU Compiler Collection (GCC) based compiler toolchain, including | |
OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. - Homepage: (none) | |
]]) | |
== 2013-12-11 22:08:55,649 main.Lmod DEBUG modulefile path goolf/1.4.10: /import/bc2/soft/centos6/modules/all/goolf/1.4.10 | |
== 2013-12-11 22:08:55,651 main.Goolf DEBUG prepare: list of direct toolchain dependencies: ['GCC/4.7.2', 'OpenMPI/1.6.4', 'OpenBLAS/0.2.6', 'FFTW/3.3.3', 'ScaLAPACK/2.0.2'] | |
== 2013-12-11 22:08:55,653 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:55,653 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:55,654 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail GCC/4.7.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:58,157 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:08:58,158 main.Lmod DEBUG 'module available GCC/4.7.2' gave 1 answers: ['GCC/4.7.2'] | |
== 2013-12-11 22:08:58,159 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:58,159 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:58,160 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show GCC/4.7.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:08:58,288 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/GCC/4.7.2: | |
---------------------------------------------------------------------------- | |
whatis("Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). - Homepage: http://gcc.gnu.org/") | |
conflict("GCC") | |
prepend_path("CPATH","/import/bc2/soft/centos6/software/GCC/4.7.2/include") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/GCC/4.7.2/lib") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/GCC/4.7.2/lib64") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2") | |
prepend_path("MANPATH","/import/bc2/soft/centos6/software/GCC/4.7.2/share/man") | |
prepend_path("PATH","/import/bc2/soft/centos6/software/GCC/4.7.2/bin") | |
setenv("EBROOTGCC","/import/bc2/soft/centos6/software/GCC/4.7.2") | |
setenv("EBVERSIONGCC","4.7.2") | |
setenv("EBDEVELGCC","/import/bc2/soft/centos6/software/GCC/4.7.2/easybuild/GCC-4.7.2-easybuild-devel") | |
help([[ The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, | |
Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). - Homepage: http://gcc.gnu.org/ | |
]]) | |
== 2013-12-11 22:08:58,289 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:08:58,290 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:08:58,291 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail OpenMPI/1.6.4' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:00,768 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:00,769 main.Lmod DEBUG 'module available OpenMPI/1.6.4' gave 1 answers: ['OpenMPI/1.6.4'] | |
== 2013-12-11 22:09:00,770 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:00,770 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:00,771 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show OpenMPI/1.6.4' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:00,907 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/OpenMPI/1.6.4: | |
---------------------------------------------------------------------------- | |
whatis("Description: The Open MPI Project is an open source MPI-2 implementation. - Homepage: http://www.open-mpi.org/") | |
conflict("OpenMPI") | |
prepend_path("CPATH","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib") | |
prepend_path("MANPATH","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/share/man") | |
prepend_path("PATH","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/bin") | |
prepend_path("PKG_CONFIG_PATH","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/pkgconfig") | |
setenv("EBROOTOPENMPI","/import/bc2/soft/centos6/software/OpenMPI/1.6.4") | |
setenv("EBVERSIONOPENMPI","1.6.4") | |
setenv("EBDEVELOPENMPI","/import/bc2/soft/centos6/software/OpenMPI/1.6.4/easybuild/OpenMPI-1.6.4-easybuild-devel") | |
help([[ The Open MPI Project is an open source MPI-2 implementation. - Homepage: http://www.open-mpi.org/ | |
]]) | |
== 2013-12-11 22:09:00,908 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:00,909 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:00,909 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail OpenBLAS/0.2.6' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:03,428 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:03,429 main.Lmod DEBUG 'module available OpenBLAS/0.2.6' gave 1 answers: ['OpenBLAS/0.2.6'] | |
== 2013-12-11 22:09:03,430 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:03,431 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:03,431 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show OpenBLAS/0.2.6' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:03,566 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/OpenBLAS/0.2.6: | |
---------------------------------------------------------------------------- | |
whatis("Description: OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. - Homepage: http://xianyi.github.com/OpenBLAS/") | |
conflict("OpenBLAS") | |
prepend_path("CPATH","/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib") | |
setenv("EBROOTOPENBLAS","/import/bc2/soft/centos6/software/OpenBLAS/0.2.6") | |
setenv("EBVERSIONOPENBLAS","0.2.6") | |
setenv("EBDEVELOPENBLAS","/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/easybuild/OpenBLAS-0.2.6-easybuild-devel") | |
help([[ OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. - Homepage: http://xianyi.github.com/OpenBLAS/ | |
]]) | |
== 2013-12-11 22:09:03,567 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:03,567 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:03,568 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail FFTW/3.3.3' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:06,083 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:06,085 main.Lmod DEBUG 'module available FFTW/3.3.3' gave 1 answers: ['FFTW/3.3.3'] | |
== 2013-12-11 22:09:06,085 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:06,086 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:06,087 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show FFTW/3.3.3' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:06,227 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/FFTW/3.3.3: | |
---------------------------------------------------------------------------- | |
whatis("Description: FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data. - Homepage: http://www.fftw.org") | |
conflict("FFTW") | |
prepend_path("CPATH","/import/bc2/soft/centos6/software/FFTW/3.3.3/include") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/FFTW/3.3.3/lib") | |
prepend_path("MANPATH","/import/bc2/soft/centos6/software/FFTW/3.3.3/share/man") | |
prepend_path("PATH","/import/bc2/soft/centos6/software/FFTW/3.3.3/bin") | |
prepend_path("PKG_CONFIG_PATH","/import/bc2/soft/centos6/software/FFTW/3.3.3/lib/pkgconfig") | |
setenv("EBROOTFFTW","/import/bc2/soft/centos6/software/FFTW/3.3.3") | |
setenv("EBVERSIONFFTW","3.3.3") | |
setenv("EBDEVELFFTW","/import/bc2/soft/centos6/software/FFTW/3.3.3/easybuild/FFTW-3.3.3-easybuild-devel") | |
help([[ FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) | |
in one or more dimensions, of arbitrary input size, and of both real and complex data. - Homepage: http://www.fftw.org | |
]]) | |
== 2013-12-11 22:09:06,228 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:06,229 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:06,230 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail ScaLAPACK/2.0.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:08,723 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:08,725 main.Lmod DEBUG 'module available ScaLAPACK/2.0.2' gave 1 answers: ['ScaLAPACK/2.0.2'] | |
== 2013-12-11 22:09:08,725 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:08,726 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:08,726 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python show ScaLAPACK/2.0.2' from /import/bc2/soft/centos6/installed_eb_files/Python | |
== 2013-12-11 22:09:08,857 main.Lmod DEBUG modinfo: os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['LMOD_DEFAULT_MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
os.environ['MODULEPATH'] = '/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'; | |
---------------------------------------------------------------------------- | |
/import/bc2/soft/centos6/modules/all/ScaLAPACK/2.0.2: | |
---------------------------------------------------------------------------- | |
whatis("Description: The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers. - Homepage: http://www.netlib.org/scalapack/") | |
conflict("ScaLAPACK") | |
prepend_path("CPATH","/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include") | |
prepend_path("LD_LIBRARY_PATH","/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib") | |
setenv("EBROOTSCALAPACK","/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2") | |
setenv("EBVERSIONSCALAPACK","2.0.2") | |
setenv("EBDEVELSCALAPACK","/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/easybuild/ScaLAPACK-2.0.2-easybuild-devel") | |
help([[ The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines | |
redesigned for distributed memory MIMD parallel computers. - Homepage: http://www.netlib.org/scalapack/ | |
]]) | |
== 2013-12-11 22:09:08,859 main.Goolf DEBUG get_software_version software version 2.0.2 for ScaLAPACK was found in environment | |
== 2013-12-11 22:09:08,860 main.Goolf DEBUG Removing optional module BLACS from list of toolchain elements. | |
== 2013-12-11 22:09:08,861 main.Goolf DEBUG List of toolchain dependency modules from loaded toolchain module: set(['ScaLAPACK', 'GCC', 'OpenMPI', 'FFTW', 'OpenBLAS']) | |
== 2013-12-11 22:09:08,861 main.Goolf DEBUG List of toolchain elements from toolchain definition: set(['GCC', 'FFTW', 'OpenMPI', 'ScaLAPACK', 'OpenBLAS']) | |
== 2013-12-11 22:09:08,862 main.Goolf INFO List of toolchain dependency modules and toolchain definition match! | |
== 2013-12-11 22:09:08,862 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,867 main.ToolchainVariables DEBUG setdefault: name CC initialising. | |
== 2013-12-11 22:09:08,867 main.ToolchainVariables_CC DEBUG _is_protected: False value gcc ('gcc') | |
== 2013-12-11 22:09:08,868 main.ToolchainVariables_CC DEBUG nappend: value ['gcc'] newvalue ['gcc'] position None | |
== 2013-12-11 22:09:08,868 main.ToolchainVariables_CC DEBUG __str__: return gcc (self: [['gcc']]) | |
== 2013-12-11 22:09:08,869 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,870 main.ToolchainVariables DEBUG setdefault: name CXX initialising. | |
== 2013-12-11 22:09:08,870 main.ToolchainVariables_CXX DEBUG _is_protected: False value g++ ('g++') | |
== 2013-12-11 22:09:08,872 main.ToolchainVariables_CXX DEBUG nappend: value ['g++'] newvalue ['g++'] position None | |
== 2013-12-11 22:09:08,872 main.ToolchainVariables_CXX DEBUG __str__: return g++ (self: [['g++']]) | |
== 2013-12-11 22:09:08,872 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,874 main.ToolchainVariables DEBUG setdefault: name F77 initialising. | |
== 2013-12-11 22:09:08,874 main.ToolchainVariables_F77 DEBUG _is_protected: False value gfortran ('gfortran') | |
== 2013-12-11 22:09:08,875 main.ToolchainVariables_F77 DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:08,875 main.ToolchainVariables_F77 DEBUG __str__: return gfortran (self: [['gfortran']]) | |
== 2013-12-11 22:09:08,876 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,877 main.ToolchainVariables DEBUG setdefault: name F90 initialising. | |
== 2013-12-11 22:09:08,877 main.ToolchainVariables_F90 DEBUG _is_protected: False value gfortran ('gfortran') | |
== 2013-12-11 22:09:08,879 main.ToolchainVariables_F90 DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:08,879 main.ToolchainVariables_F90 DEBUG __str__: return gfortran (self: [['gfortran']]) | |
== 2013-12-11 22:09:08,879 main.ToolchainOptions WARNING option: option with name _opt_CC returns None | |
== 2013-12-11 22:09:08,880 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,880 main.ToolchainOptions WARNING option: option with name _opt_CXX returns None | |
== 2013-12-11 22:09:08,880 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,880 main.ToolchainOptions WARNING option: option with name _opt_F77 returns None | |
== 2013-12-11 22:09:08,881 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,881 main.ToolchainOptions WARNING option: option with name _opt_F90 returns None | |
== 2013-12-11 22:09:08,881 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,881 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,883 main.ToolchainVariables DEBUG setdefault: name LIBS initialising. | |
== 2013-12-11 22:09:08,883 main.ToolchainVariables_LIBS DEBUG _is_protected: False value ['pthread'] (['pthread']) | |
== 2013-12-11 22:09:08,884 main.ToolchainVariables_LIBS DEBUG nappend: value ['pthread'] newvalue ['pthread'] position 10 | |
== 2013-12-11 22:09:08,884 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,885 main.ToolchainVariables_LIBS DEBUG _is_protected: False value ['m'] (['m']) | |
== 2013-12-11 22:09:08,886 main.ToolchainVariables_LIBS DEBUG nappend: value ['m'] newvalue ['m'] position None | |
== 2013-12-11 22:09:08,886 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,887 main.ToolchainVariables DEBUG setdefault: name FLIBS initialising. | |
== 2013-12-11 22:09:08,888 main.ToolchainVariables_FLIBS DEBUG _is_protected: False value gfortran ('gfortran') | |
== 2013-12-11 22:09:08,889 main.ToolchainVariables_FLIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position 5 | |
== 2013-12-11 22:09:08,889 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/GCC/4.7.2 for GCC was found in environment | |
== 2013-12-11 22:09:08,889 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:08,891 main.ToolchainVariables DEBUG setdefault: name LDFLAGS initialising. | |
== 2013-12-11 22:09:08,891 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,892 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,892 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/GCC/4.7.2 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:08,893 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/GCC/4.7.2/lib64 | |
== 2013-12-11 22:09:08,893 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/GCC/4.7.2/lib | |
== 2013-12-11 22:09:08,893 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nextend | |
== 2013-12-11 22:09:08,895 main.ToolchainVariables DEBUG setdefault: name OPTFLAGS initialising. | |
== 2013-12-11 22:09:08,896 main.ToolchainVariables_OPTFLAGS DEBUG nextend: value ['O3', 'march=native'] res [['O3'], ['march=native']] | |
== 2013-12-11 22:09:08,897 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nextend | |
== 2013-12-11 22:09:08,898 main.ToolchainVariables DEBUG setdefault: name PRECFLAGS initialising. | |
== 2013-12-11 22:09:08,898 main.ToolchainVariables_PRECFLAGS DEBUG nextend: ignoring el [] from value [[]] (not _str_ok) | |
== 2013-12-11 22:09:08,899 main.ToolchainVariables_PRECFLAGS DEBUG nextend: value [[]] res [] | |
== 2013-12-11 22:09:08,899 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,900 main.ToolchainVariables DEBUG setdefault: name CFLAGS initialising. | |
== 2013-12-11 22:09:08,900 main.ToolchainVariables_CFLAGS DEBUG _is_protected: False value ['fPIC'] (['fPIC']) | |
== 2013-12-11 22:09:08,901 main.ToolchainVariables_CFLAGS DEBUG nappend: value ['fPIC'] newvalue ['fPIC'] position None | |
== 2013-12-11 22:09:08,902 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,902 main.ToolchainVariables_CFLAGS DEBUG _is_protected: False value [] ([]) | |
== 2013-12-11 22:09:08,903 main.ToolchainVariables_CFLAGS DEBUG nappend: ignoring value [] newvalue [] (not _str_ok) | |
== 2013-12-11 22:09:08,903 main.ToolchainVariables DEBUG join name CFLAGS others ('OPTFLAGS', 'PRECFLAGS') | |
== 2013-12-11 22:09:08,904 main.ToolchainVariables DEBUG join other OPTFLAGS in self: other [['O3'], ['march=native']] | |
== 2013-12-11 22:09:08,904 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,904 main.ToolchainVariables_CFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -O3 (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,905 main.ToolchainVariables_CFLAGS DEBUG _is_protected: True value -O3 (['O3']) | |
== 2013-12-11 22:09:08,906 main.ToolchainVariables_CFLAGS DEBUG nappend: value ['O3'] newvalue ['O3'] position None | |
== 2013-12-11 22:09:08,907 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,907 main.ToolchainVariables_CFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -march=native (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,907 main.ToolchainVariables_CFLAGS DEBUG _is_protected: True value -march=native (['march=native']) | |
== 2013-12-11 22:09:08,909 main.ToolchainVariables_CFLAGS DEBUG nappend: value ['march=native'] newvalue ['march=native'] position None | |
== 2013-12-11 22:09:08,909 main.ToolchainVariables DEBUG join other PRECFLAGS in self: other [] | |
== 2013-12-11 22:09:08,909 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,911 main.ToolchainVariables DEBUG setdefault: name CXXFLAGS initialising. | |
== 2013-12-11 22:09:08,911 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: False value ['fPIC'] (['fPIC']) | |
== 2013-12-11 22:09:08,912 main.ToolchainVariables_CXXFLAGS DEBUG nappend: value ['fPIC'] newvalue ['fPIC'] position None | |
== 2013-12-11 22:09:08,912 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,913 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: False value [] ([]) | |
== 2013-12-11 22:09:08,914 main.ToolchainVariables_CXXFLAGS DEBUG nappend: ignoring value [] newvalue [] (not _str_ok) | |
== 2013-12-11 22:09:08,914 main.ToolchainVariables DEBUG join name CXXFLAGS others ('OPTFLAGS', 'PRECFLAGS') | |
== 2013-12-11 22:09:08,914 main.ToolchainVariables DEBUG join other OPTFLAGS in self: other [['O3'], ['march=native']] | |
== 2013-12-11 22:09:08,915 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,915 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -O3 (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,915 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: True value -O3 (['O3']) | |
== 2013-12-11 22:09:08,917 main.ToolchainVariables_CXXFLAGS DEBUG nappend: value ['O3'] newvalue ['O3'] position None | |
== 2013-12-11 22:09:08,917 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,917 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -march=native (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,918 main.ToolchainVariables_CXXFLAGS DEBUG _is_protected: True value -march=native (['march=native']) | |
== 2013-12-11 22:09:08,919 main.ToolchainVariables_CXXFLAGS DEBUG nappend: value ['march=native'] newvalue ['march=native'] position None | |
== 2013-12-11 22:09:08,920 main.ToolchainVariables DEBUG join other PRECFLAGS in self: other [] | |
== 2013-12-11 22:09:08,920 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,921 main.ToolchainVariables DEBUG setdefault: name FFLAGS initialising. | |
== 2013-12-11 22:09:08,921 main.ToolchainVariables_FFLAGS DEBUG _is_protected: False value ['fPIC'] (['fPIC']) | |
== 2013-12-11 22:09:08,923 main.ToolchainVariables_FFLAGS DEBUG nappend: value ['fPIC'] newvalue ['fPIC'] position None | |
== 2013-12-11 22:09:08,923 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,923 main.ToolchainVariables_FFLAGS DEBUG _is_protected: False value [] ([]) | |
== 2013-12-11 22:09:08,924 main.ToolchainVariables_FFLAGS DEBUG nappend: ignoring value [] newvalue [] (not _str_ok) | |
== 2013-12-11 22:09:08,924 main.ToolchainVariables DEBUG join name FFLAGS others ('OPTFLAGS', 'PRECFLAGS') | |
== 2013-12-11 22:09:08,925 main.ToolchainVariables DEBUG join other OPTFLAGS in self: other [['O3'], ['march=native']] | |
== 2013-12-11 22:09:08,925 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,925 main.ToolchainVariables_FFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -O3 (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,926 main.ToolchainVariables_FFLAGS DEBUG _is_protected: True value -O3 (['O3']) | |
== 2013-12-11 22:09:08,927 main.ToolchainVariables_FFLAGS DEBUG nappend: value ['O3'] newvalue ['O3'] position None | |
== 2013-12-11 22:09:08,927 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,928 main.ToolchainVariables_FFLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -march=native (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,928 main.ToolchainVariables_FFLAGS DEBUG _is_protected: True value -march=native (['march=native']) | |
== 2013-12-11 22:09:08,930 main.ToolchainVariables_FFLAGS DEBUG nappend: value ['march=native'] newvalue ['march=native'] position None | |
== 2013-12-11 22:09:08,930 main.ToolchainVariables DEBUG join other PRECFLAGS in self: other [] | |
== 2013-12-11 22:09:08,930 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,932 main.ToolchainVariables DEBUG setdefault: name F90FLAGS initialising. | |
== 2013-12-11 22:09:08,932 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: False value ['fPIC'] (['fPIC']) | |
== 2013-12-11 22:09:08,933 main.ToolchainVariables_F90FLAGS DEBUG nappend: value ['fPIC'] newvalue ['fPIC'] position None | |
== 2013-12-11 22:09:08,933 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,933 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: False value [] ([]) | |
== 2013-12-11 22:09:08,935 main.ToolchainVariables_F90FLAGS DEBUG nappend: ignoring value [] newvalue [] (not _str_ok) | |
== 2013-12-11 22:09:08,935 main.ToolchainVariables DEBUG join name F90FLAGS others ('OPTFLAGS', 'PRECFLAGS') | |
== 2013-12-11 22:09:08,935 main.ToolchainVariables DEBUG join other OPTFLAGS in self: other [['O3'], ['march=native']] | |
== 2013-12-11 22:09:08,935 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,936 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -O3 (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,936 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: True value -O3 (['O3']) | |
== 2013-12-11 22:09:08,938 main.ToolchainVariables_F90FLAGS DEBUG nappend: value ['O3'] newvalue ['O3'] position None | |
== 2013-12-11 22:09:08,938 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,938 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.FlagList'>] value -march=native (<class 'easybuild.tools.toolchain.variables.FlagList'>) | |
== 2013-12-11 22:09:08,938 main.ToolchainVariables_F90FLAGS DEBUG _is_protected: True value -march=native (['march=native']) | |
== 2013-12-11 22:09:08,940 main.ToolchainVariables_F90FLAGS DEBUG nappend: value ['march=native'] newvalue ['march=native'] position None | |
== 2013-12-11 22:09:08,940 main.ToolchainVariables DEBUG join other PRECFLAGS in self: other [] | |
== 2013-12-11 22:09:08,941 main.Goolf DEBUG set_variables: compiler variables {'F90FLAGS': [['fPIC'], ['O3'], ['march=native']], 'OPTFLAGS': [['O3'], ['march=native']], 'CFLAGS': [['fPIC'], ['O3'], ['march=native']], 'FLIBS': [['gfortran']], 'CC': [['gcc', None]], 'FFLAGS': [['fPIC'], ['O3'], ['march=native']], 'CXXFLAGS': [['fPIC'], ['O3'], ['march=native']], 'CXX': [['g++', None]], 'F90': [['gfortran', None]], 'LDFLAGS': [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib']], 'LIBS': [['pthread'], ['m']], 'PRECFLAGS': [], 'F77': [['gfortran', None]]} | |
== 2013-12-11 22:09:08,941 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,942 main.ToolchainVariables DEBUG setdefault: name OMPI_CC initialising. | |
== 2013-12-11 22:09:08,943 main.ToolchainVariables_OMPI_CC DEBUG _is_protected: False value gcc ('gcc') | |
== 2013-12-11 22:09:08,944 main.ToolchainVariables_OMPI_CC DEBUG nappend: value ['gcc'] newvalue ['gcc'] position None | |
== 2013-12-11 22:09:08,944 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,946 main.ToolchainVariables DEBUG setdefault: name OMPI_CXX initialising. | |
== 2013-12-11 22:09:08,946 main.ToolchainVariables_OMPI_CXX DEBUG _is_protected: False value g++ ('g++') | |
== 2013-12-11 22:09:08,947 main.ToolchainVariables_OMPI_CXX DEBUG nappend: value ['g++'] newvalue ['g++'] position None | |
== 2013-12-11 22:09:08,947 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,949 main.ToolchainVariables DEBUG setdefault: name OMPI_F77 initialising. | |
== 2013-12-11 22:09:08,949 main.ToolchainVariables_OMPI_F77 DEBUG _is_protected: False value gfortran ('gfortran') | |
== 2013-12-11 22:09:08,950 main.ToolchainVariables_OMPI_F77 DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:08,950 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,952 main.ToolchainVariables DEBUG setdefault: name OMPI_FC initialising. | |
== 2013-12-11 22:09:08,952 main.ToolchainVariables_OMPI_FC DEBUG _is_protected: False value gfortran ('gfortran') | |
== 2013-12-11 22:09:08,953 main.ToolchainVariables_OMPI_FC DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:08,953 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,955 main.ToolchainVariables DEBUG setdefault: name MPICC initialising. | |
== 2013-12-11 22:09:08,955 main.ToolchainVariables_MPICC DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,956 main.ToolchainVariables_MPICC DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,957 main.ToolchainVariables_CC DEBUG __str__: return gcc (self: [['gcc', None]]) | |
== 2013-12-11 22:09:08,957 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,957 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,959 main.ToolchainVariables DEBUG setdefault: name MPICXX initialising. | |
== 2013-12-11 22:09:08,959 main.ToolchainVariables_MPICXX DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,960 main.ToolchainVariables_MPICXX DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,961 main.ToolchainVariables_CXX DEBUG __str__: return g++ (self: [['g++', None]]) | |
== 2013-12-11 22:09:08,961 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,961 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,963 main.ToolchainVariables DEBUG setdefault: name MPIF77 initialising. | |
== 2013-12-11 22:09:08,963 main.ToolchainVariables_MPIF77 DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,964 main.ToolchainVariables_MPIF77 DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,964 main.ToolchainVariables_F77 DEBUG __str__: return gfortran (self: [['gfortran', None]]) | |
== 2013-12-11 22:09:08,965 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,965 main.ToolchainOptions WARNING option: option with name _opt_MPIF77 returns None | |
== 2013-12-11 22:09:08,965 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,967 main.ToolchainVariables DEBUG setdefault: name MPIF90 initialising. | |
== 2013-12-11 22:09:08,967 main.ToolchainVariables_MPIF90 DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,968 main.ToolchainVariables_MPIF90 DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,969 main.ToolchainVariables_F90 DEBUG __str__: return gfortran (self: [['gfortran', None]]) | |
== 2013-12-11 22:09:08,969 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function nappend_el | |
== 2013-12-11 22:09:08,969 main.ToolchainOptions WARNING option: option with name _opt_MPIF90 returns None | |
== 2013-12-11 22:09:08,969 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/OpenMPI/1.6.4 for OpenMPI was found in environment | |
== 2013-12-11 22:09:08,970 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:08,971 main.ToolchainVariables DEBUG setdefault: name MPI_LIB_STATIC initialising. | |
== 2013-12-11 22:09:08,971 main.ToolchainVariables_MPI_LIB_STATIC DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,973 main.ToolchainVariables_MPI_LIB_STATIC DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,973 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenMPI/1.6.4 paths ['lib'] suffix 64 filename libmpi.a append_all False | |
== 2013-12-11 22:09:08,973 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:08,974 main.ToolchainVariables DEBUG setdefault: name MPI_LIB_SHARED initialising. | |
== 2013-12-11 22:09:08,975 main.ToolchainVariables_MPI_LIB_SHARED DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,976 main.ToolchainVariables_MPI_LIB_SHARED DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,976 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenMPI/1.6.4 paths ['lib'] suffix 64 filename libmpi.so append_all False | |
== 2013-12-11 22:09:08,977 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so | |
== 2013-12-11 22:09:08,977 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:08,978 main.ToolchainVariables DEBUG setdefault: name MPI_LIB_DIR initialising. | |
== 2013-12-11 22:09:08,978 main.ToolchainVariables_MPI_LIB_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,980 main.ToolchainVariables_MPI_LIB_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,980 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenMPI/1.6.4 paths ['lib'] suffix 64 filename None append_all False | |
== 2013-12-11 22:09:08,980 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib | |
== 2013-12-11 22:09:08,980 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:08,982 main.ToolchainVariables DEBUG setdefault: name MPI_INC_DIR initialising. | |
== 2013-12-11 22:09:08,982 main.ToolchainVariables_MPI_INC_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:08,983 main.ToolchainVariables_MPI_INC_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:08,984 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenMPI/1.6.4 paths ['include'] suffix 64 filename None append_all False | |
== 2013-12-11 22:09:08,984 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/OpenMPI/1.6.4/include | |
== 2013-12-11 22:09:08,984 main.Goolf DEBUG set_variables: compiler variables {'MPI_INC_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include']], 'MPI_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib']], 'CXXFLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPICC': [['mpicc', '']], 'MPI_LIB_STATIC': [[]], 'LIBS': [['pthread'], ['m']], 'FLIBS': [['gfortran']], 'F90': [['gfortran', None]], 'OMPI_F77': [['gfortran']], 'F90FLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPICXX': [['mpicxx', '']], 'LDFLAGS': [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib']], 'CC': [['gcc', None]], 'FFLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPIF90': [['mpif90', None]], 'OMPI_CC': [['gcc']], 'OPTFLAGS': [['O3'], ['march=native']], 'PRECFLAGS': [], 'F77': [['gfortran', None]], 'MPIF77': [['mpif77', None]], 'CXX': [['g++', None]], 'OMPI_FC': [['gfortran']], 'MPI_LIB_SHARED': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so']], 'CFLAGS': [['fPIC'], ['O3'], ['march=native']], 'OMPI_CXX': [['g++']]} | |
== 2013-12-11 22:09:08,984 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,986 main.ToolchainVariables DEBUG setdefault: name LIBBLAS initialising. | |
== 2013-12-11 22:09:08,986 main.ToolchainVariables_LIBBLAS DEBUG _is_protected: False value ['openblas'] (['openblas']) | |
== 2013-12-11 22:09:08,987 main.ToolchainVariables_LIBBLAS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:08,990 main.ToolchainVariables DEBUG join name LIBBLAS others ('FLIBS',) | |
== 2013-12-11 22:09:08,990 main.ToolchainVariables DEBUG join other FLIBS in self: other [['gfortran']] | |
== 2013-12-11 22:09:08,990 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,990 main.ToolchainVariables_LIBBLAS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:08,991 main.ToolchainVariables_LIBBLAS DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:08,993 main.ToolchainVariables_LIBBLAS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:08,993 main.ToolchainVariables DEBUG join name LIBBLAS_MT others ('LIBBLAS',) | |
== 2013-12-11 22:09:08,993 main.ToolchainVariables DEBUG join other LIBBLAS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:08,993 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,995 main.ToolchainVariables DEBUG setdefault: name LIBBLAS_MT initialising. | |
== 2013-12-11 22:09:08,995 main.ToolchainVariables_LIBBLAS_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:08,995 main.ToolchainVariables_LIBBLAS_MT DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:08,999 main.ToolchainVariables_LIBBLAS_MT DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:08,999 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:08,999 main.ToolchainVariables_LIBBLAS_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,000 main.ToolchainVariables_LIBBLAS_MT DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,002 main.ToolchainVariables_LIBBLAS_MT DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,002 main.ToolchainVariables DEBUG join name BLAS_STATIC_LIBS others ('LIBBLAS',) | |
== 2013-12-11 22:09:09,002 main.ToolchainVariables DEBUG join other LIBBLAS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,002 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,004 main.ToolchainVariables DEBUG setdefault: name BLAS_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,004 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,005 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,006 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,006 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,007 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,008 main.ToolchainVariables DEBUG join name BLAS_MT_STATIC_LIBS others ('LIBBLAS_MT',) | |
== 2013-12-11 22:09:09,008 main.ToolchainVariables DEBUG join other LIBBLAS_MT in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,008 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,009 main.ToolchainVariables DEBUG setdefault: name BLAS_MT_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,010 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,011 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,011 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,012 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,013 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,013 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 for OpenBLAS was found in environment | |
== 2013-12-11 22:09:09,013 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,015 main.ToolchainVariables DEBUG setdefault: name BLAS_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,015 main.ToolchainVariables_BLAS_LIB_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,016 main.ToolchainVariables_BLAS_LIB_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,017 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 paths ['lib'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,017 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,017 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,019 main.ToolchainVariables DEBUG setdefault: name BLAS_INC_DIR initialising. | |
== 2013-12-11 22:09:09,019 main.ToolchainVariables_BLAS_INC_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,020 main.ToolchainVariables_BLAS_INC_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,020 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 paths ['include'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,021 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,021 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 for OpenBLAS was found in environment | |
== 2013-12-11 22:09:09,021 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,023 main.ToolchainVariables DEBUG setdefault: name CPPFLAGS initialising. | |
== 2013-12-11 22:09:09,023 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,024 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,025 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 subdirs ['include'] | |
== 2013-12-11 22:09:09,025 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,025 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,025 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,027 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,027 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,027 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib64 was not found | |
== 2013-12-11 22:09:09,028 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,028 main.Goolf DEBUG _set_lapack_variables: LAPACK_IS_BLAS True LAPACK_REQUIRES ['LIBBLAS'] | |
== 2013-12-11 22:09:09,028 main.ToolchainVariables DEBUG join name LIBLAPACK_ONLY others ('LIBBLAS',) | |
== 2013-12-11 22:09:09,028 main.ToolchainVariables DEBUG join other LIBBLAS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,029 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,030 main.ToolchainVariables DEBUG setdefault: name LIBLAPACK_ONLY initialising. | |
== 2013-12-11 22:09:09,030 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,031 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,034 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,034 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,035 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,035 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,037 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,037 main.ToolchainVariables DEBUG join name LIBLAPACK_MT_ONLY others ('LIBBLAS_MT',) | |
== 2013-12-11 22:09:09,037 main.ToolchainVariables DEBUG join other LIBBLAS_MT in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,038 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,039 main.ToolchainVariables DEBUG setdefault: name LIBLAPACK_MT_ONLY initialising. | |
== 2013-12-11 22:09:09,039 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,040 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,043 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,043 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,044 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,044 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,046 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,046 main.ToolchainVariables DEBUG join name LIBLAPACK others ('LIBBLAS',) | |
== 2013-12-11 22:09:09,046 main.ToolchainVariables DEBUG join other LIBBLAS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,046 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,048 main.ToolchainVariables DEBUG setdefault: name LIBLAPACK initialising. | |
== 2013-12-11 22:09:09,048 main.ToolchainVariables_LIBLAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,049 main.ToolchainVariables_LIBLAPACK DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,052 main.ToolchainVariables_LIBLAPACK DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,052 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,053 main.ToolchainVariables_LIBLAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,053 main.ToolchainVariables_LIBLAPACK DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,055 main.ToolchainVariables_LIBLAPACK DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,055 main.ToolchainVariables DEBUG join name LIBLAPACK_MT others ('LIBBLAS_MT',) | |
== 2013-12-11 22:09:09,055 main.ToolchainVariables DEBUG join other LIBBLAS_MT in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,055 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,057 main.ToolchainVariables DEBUG setdefault: name LIBLAPACK_MT initialising. | |
== 2013-12-11 22:09:09,057 main.ToolchainVariables_LIBLAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,057 main.ToolchainVariables_LIBLAPACK_MT DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,061 main.ToolchainVariables_LIBLAPACK_MT DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,061 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,061 main.ToolchainVariables_LIBLAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,062 main.ToolchainVariables_LIBLAPACK_MT DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,063 main.ToolchainVariables_LIBLAPACK_MT DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,064 main.ToolchainVariables DEBUG join name LAPACK_STATIC_LIBS others ('BLAS_STATIC_LIBS',) | |
== 2013-12-11 22:09:09,064 main.ToolchainVariables DEBUG join other BLAS_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,064 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,066 main.ToolchainVariables DEBUG setdefault: name LAPACK_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,066 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,066 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,068 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,068 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,069 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,069 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,071 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,071 main.ToolchainVariables DEBUG join name LAPACK_MT_STATIC_LIBS others ('BLAS_MT_STATIC_LIBS',) | |
== 2013-12-11 22:09:09,071 main.ToolchainVariables DEBUG join other BLAS_MT_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,072 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,073 main.ToolchainVariables DEBUG setdefault: name LAPACK_MT_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,073 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,074 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,075 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,076 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,076 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,076 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,078 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,078 main.ToolchainVariables DEBUG join name LAPACK_LIB_DIR others ('BLAS_LIB_DIR',) | |
== 2013-12-11 22:09:09,078 main.ToolchainVariables DEBUG join other BLAS_LIB_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] | |
== 2013-12-11 22:09:09,079 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,080 main.ToolchainVariables DEBUG setdefault: name LAPACK_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,080 main.ToolchainVariables_LAPACK_LIB_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,081 main.ToolchainVariables_LAPACK_LIB_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']) | |
== 2013-12-11 22:09:09,082 main.ToolchainVariables_LAPACK_LIB_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] position None | |
== 2013-12-11 22:09:09,083 main.ToolchainVariables DEBUG join name LAPACK_INC_DIR others ('BLAS_INC_DIR',) | |
== 2013-12-11 22:09:09,083 main.ToolchainVariables DEBUG join other BLAS_INC_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] | |
== 2013-12-11 22:09:09,083 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,085 main.ToolchainVariables DEBUG setdefault: name LAPACK_INC_DIR initialising. | |
== 2013-12-11 22:09:09,085 main.ToolchainVariables_LAPACK_INC_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,085 main.ToolchainVariables_LAPACK_INC_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']) | |
== 2013-12-11 22:09:09,087 main.ToolchainVariables_LAPACK_INC_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] position None | |
== 2013-12-11 22:09:09,087 main.ToolchainVariables DEBUG join name BLAS_LAPACK_LIB_DIR others ('LAPACK_LIB_DIR', 'BLAS_LIB_DIR') | |
== 2013-12-11 22:09:09,088 main.ToolchainVariables DEBUG join other LAPACK_LIB_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] | |
== 2013-12-11 22:09:09,088 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,089 main.ToolchainVariables DEBUG setdefault: name BLAS_LAPACK_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,090 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,090 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']) | |
== 2013-12-11 22:09:09,092 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] position None | |
== 2013-12-11 22:09:09,092 main.ToolchainVariables DEBUG join other BLAS_LIB_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] | |
== 2013-12-11 22:09:09,092 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,093 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,093 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']) | |
== 2013-12-11 22:09:09,095 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'] position None | |
== 2013-12-11 22:09:09,095 main.ToolchainVariables DEBUG join name BLAS_LAPACK_INC_DIR others ('LAPACK_INC_DIR', 'BLAS_INC_DIR') | |
== 2013-12-11 22:09:09,095 main.ToolchainVariables DEBUG join other LAPACK_INC_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] | |
== 2013-12-11 22:09:09,096 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,097 main.ToolchainVariables DEBUG setdefault: name BLAS_LAPACK_INC_DIR initialising. | |
== 2013-12-11 22:09:09,097 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,098 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']) | |
== 2013-12-11 22:09:09,099 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] position None | |
== 2013-12-11 22:09:09,100 main.ToolchainVariables DEBUG join other BLAS_INC_DIR in self: other [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] | |
== 2013-12-11 22:09:09,100 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,100 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,100 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']) | |
== 2013-12-11 22:09:09,102 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] newvalue ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'] position None | |
== 2013-12-11 22:09:09,102 main.ToolchainVariables DEBUG join name BLAS_LAPACK_STATIC_LIBS others ('LAPACK_STATIC_LIBS', 'BLAS_STATIC_LIBS') | |
== 2013-12-11 22:09:09,103 main.ToolchainVariables DEBUG join other LAPACK_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,103 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,104 main.ToolchainVariables DEBUG setdefault: name BLAS_LAPACK_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,105 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,105 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,107 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,107 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,107 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,108 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,109 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,110 main.ToolchainVariables DEBUG join other BLAS_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,110 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,110 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,111 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,112 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,113 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,113 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,113 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,115 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,115 main.ToolchainVariables DEBUG join name BLAS_LAPACK_MT_STATIC_LIBS others ('LAPACK_MT_STATIC_LIBS', 'BLAS_MT_STATIC_LIBS') | |
== 2013-12-11 22:09:09,115 main.ToolchainVariables DEBUG join other LAPACK_MT_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,116 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,117 main.ToolchainVariables DEBUG setdefault: name BLAS_LAPACK_MT_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,117 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,118 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,119 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,120 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,120 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,120 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,122 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,122 main.ToolchainVariables DEBUG join other BLAS_MT_STATIC_LIBS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,123 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,123 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libopenblas.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,123 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libopenblas.a (['openblas']) | |
== 2013-12-11 22:09:09,125 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,125 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,125 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libgfortran.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,126 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG _is_protected: True value libgfortran.a (['gfortran']) | |
== 2013-12-11 22:09:09,128 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,128 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 for OpenBLAS was found in environment | |
== 2013-12-11 22:09:09,128 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,128 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,130 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,130 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 subdirs ['include'] | |
== 2013-12-11 22:09:09,130 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,131 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,131 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,132 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,132 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/OpenBLAS/0.2.6 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,133 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib64 was not found | |
== 2013-12-11 22:09:09,133 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,133 main.Goolf DEBUG get_software_version software version 2.0.2 for ScaLAPACK was found in environment | |
== 2013-12-11 22:09:09,134 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,135 main.ToolchainVariables DEBUG setdefault: name LIBSCALAPACK_ONLY initialising. | |
== 2013-12-11 22:09:09,135 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG _is_protected: False value ['scalapack'] (['scalapack']) | |
== 2013-12-11 22:09:09,136 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,139 main.ToolchainVariables DEBUG join name LIBSCALAPACK_ONLY others ('FLIBS',) | |
== 2013-12-11 22:09:09,139 main.ToolchainVariables DEBUG join other FLIBS in self: other [['gfortran']] | |
== 2013-12-11 22:09:09,139 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,140 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,140 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,142 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,142 main.ToolchainVariables DEBUG join name LIBSCALAPACK_MT_ONLY others ('LIBSCALAPACK_ONLY',) | |
== 2013-12-11 22:09:09,142 main.ToolchainVariables DEBUG join other LIBSCALAPACK_ONLY in self: other [['scalapack'], ['gfortran']] | |
== 2013-12-11 22:09:09,142 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,144 main.ToolchainVariables DEBUG setdefault: name LIBSCALAPACK_MT_ONLY initialising. | |
== 2013-12-11 22:09:09,144 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lscalapack (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,145 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG _is_protected: True value -lscalapack (['scalapack']) | |
== 2013-12-11 22:09:09,148 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,148 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,149 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,149 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,151 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,151 main.ToolchainVariables DEBUG join name LIBSCALAPACK others ('LIBSCALAPACK_ONLY', 'LIBLAPACK', 'LIBBLAS') | |
== 2013-12-11 22:09:09,151 main.ToolchainVariables DEBUG join other LIBSCALAPACK_ONLY in self: other [['scalapack'], ['gfortran']] | |
== 2013-12-11 22:09:09,152 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,153 main.ToolchainVariables DEBUG setdefault: name LIBSCALAPACK initialising. | |
== 2013-12-11 22:09:09,153 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lscalapack (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,154 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lscalapack (['scalapack']) | |
== 2013-12-11 22:09:09,157 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,157 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,158 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,158 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,160 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,160 main.ToolchainVariables DEBUG join other LIBLAPACK in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,160 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,161 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,161 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,164 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,165 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,165 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,165 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,167 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,167 main.ToolchainVariables DEBUG join other LIBBLAS in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,167 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,168 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,168 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,171 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,172 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,172 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,172 main.ToolchainVariables_LIBSCALAPACK DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,174 main.ToolchainVariables_LIBSCALAPACK DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,174 main.ToolchainVariables DEBUG join name LIBSCALAPACK_MT others ('LIBSCALAPACK_MT_ONLY', 'LIBLAPACK_MT', 'LIBBLAS_MT') | |
== 2013-12-11 22:09:09,175 main.ToolchainVariables DEBUG join other LIBSCALAPACK_MT_ONLY in self: other [['scalapack'], ['gfortran']] | |
== 2013-12-11 22:09:09,175 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,176 main.ToolchainVariables DEBUG setdefault: name LIBSCALAPACK_MT initialising. | |
== 2013-12-11 22:09:09,177 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lscalapack (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,177 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lscalapack (['scalapack']) | |
== 2013-12-11 22:09:09,180 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,181 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,181 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,181 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,183 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,183 main.ToolchainVariables DEBUG join other LIBLAPACK_MT in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,184 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,184 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,184 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,188 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,188 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,188 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,188 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,190 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,191 main.ToolchainVariables DEBUG join other LIBBLAS_MT in self: other [['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,191 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,191 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lopenblas (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,191 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,195 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,195 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,195 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.LibraryList'>] value -lgfortran (<class 'easybuild.tools.toolchain.variables.LibraryList'>) | |
== 2013-12-11 22:09:09,196 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: True value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,197 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,198 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,198 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG _is_protected: False value ['pthread'] (['pthread']) | |
== 2013-12-11 22:09:09,199 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG nappend: value ['pthread'] newvalue ['pthread'] position None | |
== 2013-12-11 22:09:09,200 main.ToolchainVariables DEBUG join name SCALAPACK_STATIC_LIBS others ('LIBSCALAPACK',) | |
== 2013-12-11 22:09:09,200 main.ToolchainVariables DEBUG join other LIBSCALAPACK in self: other [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']] | |
== 2013-12-11 22:09:09,200 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,201 main.ToolchainVariables DEBUG setdefault: name SCALAPACK_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,202 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lscalapack (['scalapack']) | |
== 2013-12-11 22:09:09,203 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,203 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,204 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,205 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,205 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,205 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,207 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,207 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,207 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,209 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,209 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,209 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,210 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,211 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,211 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,212 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,213 main.ToolchainVariables DEBUG join name SCALAPACK_MT_STATIC_LIBS others ('LIBSCALAPACK_MT',) | |
== 2013-12-11 22:09:09,213 main.ToolchainVariables DEBUG join other LIBSCALAPACK_MT in self: other [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']] | |
== 2013-12-11 22:09:09,213 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,215 main.ToolchainVariables DEBUG setdefault: name SCALAPACK_MT_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,215 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lscalapack (['scalapack']) | |
== 2013-12-11 22:09:09,216 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['scalapack'] newvalue ['scalapack'] position None | |
== 2013-12-11 22:09:09,216 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,217 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,218 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,218 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,219 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,220 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,220 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,220 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,222 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,222 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,222 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lopenblas (['openblas']) | |
== 2013-12-11 22:09:09,224 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['openblas'] newvalue ['openblas'] position None | |
== 2013-12-11 22:09:09,224 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,224 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lgfortran (['gfortran']) | |
== 2013-12-11 22:09:09,225 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['gfortran'] newvalue ['gfortran'] position None | |
== 2013-12-11 22:09:09,226 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,226 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG _is_protected: False value -lpthread (['pthread']) | |
== 2013-12-11 22:09:09,227 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG nappend: value ['pthread'] newvalue ['pthread'] position None | |
== 2013-12-11 22:09:09,228 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 for ScaLAPACK was found in environment | |
== 2013-12-11 22:09:09,228 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,229 main.ToolchainVariables DEBUG setdefault: name SCALAPACK_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,229 main.ToolchainVariables_SCALAPACK_LIB_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,231 main.ToolchainVariables_SCALAPACK_LIB_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,231 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 paths ['lib'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,231 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib | |
== 2013-12-11 22:09:09,232 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,233 main.ToolchainVariables DEBUG setdefault: name SCALAPACK_INC_DIR initialising. | |
== 2013-12-11 22:09:09,233 main.ToolchainVariables_SCALAPACK_INC_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,234 main.ToolchainVariables_SCALAPACK_INC_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,235 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 paths ['include'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,235 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include | |
== 2013-12-11 22:09:09,235 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 for ScaLAPACK was found in environment | |
== 2013-12-11 22:09:09,236 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,236 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,237 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,237 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 subdirs ['include'] | |
== 2013-12-11 22:09:09,238 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include | |
== 2013-12-11 22:09:09,238 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,238 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,240 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,240 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,240 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib64 was not found | |
== 2013-12-11 22:09:09,240 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib | |
== 2013-12-11 22:09:09,241 main.Goolf DEBUG set_variables: LinAlg variables {'CPPFLAGS': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include']], 'MPI_INC_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include']], 'LIBSCALAPACK': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'MPI_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib']], 'LAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'CXXFLAGS': [['fPIC'], ['O3'], ['march=native']], 'BLAS_LAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'MPICC': [['mpicc', '']], 'MPI_LIB_STATIC': [[]], 'LIBS': [['pthread'], ['m']], 'LIBLAPACK': [['openblas'], ['gfortran']], 'SCALAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib']], 'LIBSCALAPACK_MT_ONLY': [['scalapack'], ['gfortran']], 'LIBLAPACK_MT': [['openblas'], ['gfortran']], 'FLIBS': [['gfortran']], 'BLAS_STATIC_LIBS': [['openblas'], ['gfortran']], 'SCALAPACK_MT_STATIC_LIBS': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']], 'LIBSCALAPACK_MT': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']], 'F90': [['gfortran', None]], 'OMPI_F77': [['gfortran']], 'F90FLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPICXX': [['mpicxx', '']], 'BLAS_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'LDFLAGS': [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib']], 'BLAS_LAPACK_MT_STATIC_LIBS': [['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'CC': [['gcc', None]], 'FFLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPIF90': [['mpif90', None]], 'LAPACK_STATIC_LIBS': [['openblas'], ['gfortran']], 'LIBLAPACK_ONLY': [['openblas'], ['gfortran']], 'LIBLAPACK_MT_ONLY': [['openblas'], ['gfortran']], 'LIBBLAS': [['openblas'], ['gfortran']], 'SCALAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include']], 'OMPI_CC': [['gcc']], 'OPTFLAGS': [['O3'], ['march=native']], 'PRECFLAGS': [], 'F77': [['gfortran', None]], 'LIBSCALAPACK_ONLY': [['scalapack'], ['gfortran']], 'LAPACK_MT_STATIC_LIBS': [['openblas'], ['gfortran']], 'LAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'BLAS_LAPACK_STATIC_LIBS': [['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'MPIF77': [['mpif77', None]], 'LIBBLAS_MT': [['openblas'], ['gfortran']], 'CXX': [['g++', None]], 'BLAS_LAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'OMPI_FC': [['gfortran']], 'BLAS_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'MPI_LIB_SHARED': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so']], 'SCALAPACK_STATIC_LIBS': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'CFLAGS': [['fPIC'], ['O3'], ['march=native']], 'BLAS_MT_STATIC_LIBS': [['openblas'], ['gfortran']], 'OMPI_CXX': [['g++']]} | |
== 2013-12-11 22:09:09,241 main.Goolf DEBUG get_software_version software version 3.3.3 for FFTW was found in environment | |
== 2013-12-11 22:09:09,242 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,243 main.ToolchainVariables DEBUG setdefault: name LIBFFT initialising. | |
== 2013-12-11 22:09:09,243 main.ToolchainVariables_LIBFFT DEBUG _is_protected: False value ['fftw3'] (['fftw3']) | |
== 2013-12-11 22:09:09,245 main.ToolchainVariables_LIBFFT DEBUG nappend: value ['fftw3'] newvalue ['fftw3'] position None | |
== 2013-12-11 22:09:09,247 main.ToolchainVariables DEBUG join name FFT_STATIC_LIBS others ('LIBFFT',) | |
== 2013-12-11 22:09:09,247 main.ToolchainVariables DEBUG join other LIBFFT in self: other [['fftw3']] | |
== 2013-12-11 22:09:09,248 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,249 main.ToolchainVariables DEBUG setdefault: name FFT_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,250 main.ToolchainVariables_FFT_STATIC_LIBS DEBUG _is_protected: False value -lfftw3 (['fftw3']) | |
== 2013-12-11 22:09:09,251 main.ToolchainVariables_FFT_STATIC_LIBS DEBUG nappend: value ['fftw3'] newvalue ['fftw3'] position None | |
== 2013-12-11 22:09:09,251 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/FFTW/3.3.3 for FFTW was found in environment | |
== 2013-12-11 22:09:09,252 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,253 main.ToolchainVariables DEBUG setdefault: name FFT_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,253 main.ToolchainVariables_FFT_LIB_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,255 main.ToolchainVariables_FFT_LIB_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,255 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/FFTW/3.3.3 paths ['lib'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,255 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,255 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_exists | |
== 2013-12-11 22:09:09,257 main.ToolchainVariables DEBUG setdefault: name FFT_INC_DIR initialising. | |
== 2013-12-11 22:09:09,257 main.ToolchainVariables_FFT_INC_DIR DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,259 main.ToolchainVariables_FFT_INC_DIR DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,259 main.AbsPathList DEBUG append_exists: prefix /import/bc2/soft/centos6/software/FFTW/3.3.3 paths ['include'] suffix None filename None append_all False | |
== 2013-12-11 22:09:09,259 main.AbsPathList DEBUG append_exists: added abssolute path /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,259 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/FFTW/3.3.3 for FFTW was found in environment | |
== 2013-12-11 22:09:09,260 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,260 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,261 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,262 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/FFTW/3.3.3 subdirs ['include'] | |
== 2013-12-11 22:09:09,262 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,262 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,262 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,264 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,264 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/FFTW/3.3.3 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,264 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/FFTW/3.3.3/lib64 was not found | |
== 2013-12-11 22:09:09,265 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,265 main.ToolchainVariables DEBUG join name FFTW_INC_DIR others ('FFT_INC_DIR',) | |
== 2013-12-11 22:09:09,265 main.ToolchainVariables DEBUG join other FFT_INC_DIR in self: other [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']] | |
== 2013-12-11 22:09:09,266 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,267 main.ToolchainVariables DEBUG setdefault: name FFTW_INC_DIR initialising. | |
== 2013-12-11 22:09:09,267 main.ToolchainVariables_FFTW_INC_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/FFTW/3.3.3/include (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,267 main.ToolchainVariables_FFTW_INC_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/FFTW/3.3.3/include (['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']) | |
== 2013-12-11 22:09:09,269 main.ToolchainVariables_FFTW_INC_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/FFTW/3.3.3/include'] newvalue ['/import/bc2/soft/centos6/software/FFTW/3.3.3/include'] position None | |
== 2013-12-11 22:09:09,269 main.ToolchainVariables DEBUG join name FFTW_LIB_DIR others ('FFT_LIB_DIR',) | |
== 2013-12-11 22:09:09,269 main.ToolchainVariables DEBUG join other FFT_LIB_DIR in self: other [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']] | |
== 2013-12-11 22:09:09,270 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,271 main.ToolchainVariables DEBUG setdefault: name FFTW_LIB_DIR initialising. | |
== 2013-12-11 22:09:09,271 main.ToolchainVariables_FFTW_LIB_DIR DEBUG _is_protected: [<class 'easybuild.tools.variables.AbsPathList'>] value /import/bc2/soft/centos6/software/FFTW/3.3.3/lib (<class 'easybuild.tools.variables.AbsPathList'>) | |
== 2013-12-11 22:09:09,271 main.ToolchainVariables_FFTW_LIB_DIR DEBUG _is_protected: True value /import/bc2/soft/centos6/software/FFTW/3.3.3/lib (['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']) | |
== 2013-12-11 22:09:09,273 main.ToolchainVariables_FFTW_LIB_DIR DEBUG nappend: value ['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib'] newvalue ['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib'] position None | |
== 2013-12-11 22:09:09,273 main.ToolchainVariables DEBUG join name FFTW_STATIC_LIBS others ('FFT_STATIC_LIBS',) | |
== 2013-12-11 22:09:09,273 main.ToolchainVariables DEBUG join other FFT_STATIC_LIBS in self: other [['fftw3']] | |
== 2013-12-11 22:09:09,273 main.ToolchainVariables DEBUG Passthrough to LISTCLASS function nappend | |
== 2013-12-11 22:09:09,274 main.ToolchainVariables DEBUG setdefault: name FFTW_STATIC_LIBS initialising. | |
== 2013-12-11 22:09:09,275 main.ToolchainVariables_FFTW_STATIC_LIBS DEBUG _is_protected: [<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>] value libfftw3.a (<class 'easybuild.tools.toolchain.variables.CommaStaticLibs'>) | |
== 2013-12-11 22:09:09,275 main.ToolchainVariables_FFTW_STATIC_LIBS DEBUG _is_protected: True value libfftw3.a (['fftw3']) | |
== 2013-12-11 22:09:09,276 main.ToolchainVariables_FFTW_STATIC_LIBS DEBUG nappend: value ['fftw3'] newvalue ['fftw3'] position None | |
== 2013-12-11 22:09:09,277 main.Goolf DEBUG set_variables: FFT variables {'CPPFLAGS': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']], 'MPI_INC_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include']], 'LIBSCALAPACK': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'MPI_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib']], 'LAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'FFT_STATIC_LIBS': [['fftw3']], 'CXXFLAGS': [['fPIC'], ['O3'], ['march=native']], 'BLAS_LAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'LIBFFT': [['fftw3']], 'MPICC': [['mpicc', '']], 'MPI_LIB_STATIC': [[]], 'LIBS': [['pthread'], ['m']], 'LIBLAPACK': [['openblas'], ['gfortran']], 'SCALAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib']], 'FFTW_INC_DIR': [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']], 'LIBSCALAPACK_MT_ONLY': [['scalapack'], ['gfortran']], 'LIBLAPACK_MT': [['openblas'], ['gfortran']], 'FLIBS': [['gfortran']], 'FFTW_STATIC_LIBS': [['fftw3']], 'BLAS_STATIC_LIBS': [['openblas'], ['gfortran']], 'SCALAPACK_MT_STATIC_LIBS': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']], 'LIBSCALAPACK_MT': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']], 'F90': [['gfortran', None]], 'OMPI_F77': [['gfortran']], 'FFT_INC_DIR': [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']], 'F90FLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPICXX': [['mpicxx', '']], 'BLAS_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'FFT_LIB_DIR': [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']], 'LDFLAGS': [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']], 'BLAS_LAPACK_MT_STATIC_LIBS': [['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'CC': [['gcc', None]], 'FFLAGS': [['fPIC'], ['O3'], ['march=native']], 'MPIF90': [['mpif90', None]], 'LAPACK_STATIC_LIBS': [['openblas'], ['gfortran']], 'LIBLAPACK_ONLY': [['openblas'], ['gfortran']], 'LIBLAPACK_MT_ONLY': [['openblas'], ['gfortran']], 'LIBBLAS': [['openblas'], ['gfortran']], 'SCALAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include']], 'OMPI_CC': [['gcc']], 'OPTFLAGS': [['O3'], ['march=native']], 'PRECFLAGS': [], 'F77': [['gfortran', None]], 'LIBSCALAPACK_ONLY': [['scalapack'], ['gfortran']], 'LAPACK_MT_STATIC_LIBS': [['openblas'], ['gfortran']], 'LAPACK_LIB_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']], 'BLAS_LAPACK_STATIC_LIBS': [['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'MPIF77': [['mpif77', None]], 'LIBBLAS_MT': [['openblas'], ['gfortran']], 'CXX': [['g++', None]], 'BLAS_LAPACK_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'OMPI_FC': [['gfortran']], 'BLAS_INC_DIR': [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']], 'MPI_LIB_SHARED': [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so']], 'SCALAPACK_STATIC_LIBS': [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']], 'CFLAGS': [['fPIC'], ['O3'], ['march=native']], 'BLAS_MT_STATIC_LIBS': [['openblas'], ['gfortran']], 'FFTW_LIB_DIR': [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']], 'OMPI_CXX': [['g++']]} | |
== 2013-12-11 22:09:09,277 main.Goolf DEBUG set_variables: toolchain variables. Do nothing. | |
== 2013-12-11 22:09:09,277 main.Goolf DEBUG prepare: set additional variables onlymod=False | |
== 2013-12-11 22:09:09,277 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/bzip2/1.0.6 for bzip2 was found in environment | |
== 2013-12-11 22:09:09,278 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/zlib/1.2.8 for zlib was found in environment | |
== 2013-12-11 22:09:09,278 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/libreadline/6.2 for libreadline was found in environment | |
== 2013-12-11 22:09:09,278 main.Goolf DEBUG get_software_root software root /import/bc2/soft/centos6/software/ncurses/5.9 for ncurses was found in environment | |
== 2013-12-11 22:09:09,278 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,278 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,279 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,279 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/bzip2/1.0.6 subdirs ['include'] | |
== 2013-12-11 22:09:09,280 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/bzip2/1.0.6/include | |
== 2013-12-11 22:09:09,280 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,280 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,281 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,281 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/bzip2/1.0.6 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,281 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/bzip2/1.0.6/lib64 was not found | |
== 2013-12-11 22:09:09,282 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/bzip2/1.0.6/lib | |
== 2013-12-11 22:09:09,282 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,282 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,283 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,283 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/zlib/1.2.8 subdirs ['include'] | |
== 2013-12-11 22:09:09,283 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/zlib/1.2.8/include | |
== 2013-12-11 22:09:09,284 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,284 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,285 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,285 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/zlib/1.2.8 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,285 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/zlib/1.2.8/lib64 was not found | |
== 2013-12-11 22:09:09,285 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/zlib/1.2.8/lib | |
== 2013-12-11 22:09:09,286 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,286 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,287 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,287 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/libreadline/6.2 subdirs ['include'] | |
== 2013-12-11 22:09:09,287 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/libreadline/6.2/include | |
== 2013-12-11 22:09:09,287 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,287 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,288 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,289 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/libreadline/6.2 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,289 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/libreadline/6.2/lib64 was not found | |
== 2013-12-11 22:09:09,289 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/libreadline/6.2/lib | |
== 2013-12-11 22:09:09,289 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,289 main.ToolchainVariables_CPPFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,290 main.ToolchainVariables_CPPFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,290 main.IncludePaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/ncurses/5.9 subdirs ['include'] | |
== 2013-12-11 22:09:09,291 main.IncludePaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/ncurses/5.9/include | |
== 2013-12-11 22:09:09,291 main.ToolchainVariables DEBUG Passthrough to LISTCLASS element function append_subdirs | |
== 2013-12-11 22:09:09,291 main.ToolchainVariables_LDFLAGS DEBUG _is_protected: False value None (None) | |
== 2013-12-11 22:09:09,292 main.ToolchainVariables_LDFLAGS DEBUG nappend: value None newvalue [] position None | |
== 2013-12-11 22:09:09,292 main.LinkLibraryPaths DEBUG append_subdirs: base /import/bc2/soft/centos6/software/ncurses/5.9 subdirs ['lib64', 'lib'] | |
== 2013-12-11 22:09:09,292 main.LinkLibraryPaths WARNING flags_for_subdirs: directory /import/bc2/soft/centos6/software/ncurses/5.9/lib64 was not found | |
== 2013-12-11 22:09:09,293 main.LinkLibraryPaths DEBUG append_subdirs: added directory /import/bc2/soft/centos6/software/ncurses/5.9/lib | |
== 2013-12-11 22:09:09,293 main.ToolchainVariables_CPPFLAGS DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/include'], ['/import/bc2/soft/centos6/software/bzip2/1.0.6/include'], ['/import/bc2/soft/centos6/software/zlib/1.2.8/include'], ['/import/bc2/soft/centos6/software/libreadline/6.2/include'], ['/import/bc2/soft/centos6/software/ncurses/5.9/include']] [0] | |
== 2013-12-11 22:09:09,293 main.ToolchainVariables_CPPFLAGS DEBUG __str__: return -I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/include'], ['/import/bc2/soft/centos6/software/bzip2/1.0.6/include'], ['/import/bc2/soft/centos6/software/zlib/1.2.8/include'], ['/import/bc2/soft/centos6/software/libreadline/6.2/include'], ['/import/bc2/soft/centos6/software/ncurses/5.9/include']]) | |
== 2013-12-11 22:09:09,293 main.ToolchainVariables_MPI_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include']] [] | |
== 2013-12-11 22:09:09,294 main.ToolchainVariables_MPI_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenMPI/1.6.4/include (self: [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include']]) | |
== 2013-12-11 22:09:09,294 main.ToolchainVariables_LIBSCALAPACK DEBUG sanitize: to_remove in [['scalapack'], ['openblas'], ['openblas'], ['gfortran'], ['gfortran'], ['gfortran']] [4, 3, 1] | |
== 2013-12-11 22:09:09,294 main.ToolchainVariables_LIBSCALAPACK DEBUG idx 1 len 3 | |
== 2013-12-11 22:09:09,294 main.ToolchainVariables_LIBSCALAPACK DEBUG sanitize: JOIN_BEGIN_END idx 1 joining -lopenblas and -lscalapack | |
== 2013-12-11 22:09:09,295 main.ToolchainVariables_LIBSCALAPACK DEBUG __str__: return -lscalapack -lopenblas -lgfortran (self: [['scalapack', 'openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,295 main.ToolchainVariables_MPI_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib']] [] | |
== 2013-12-11 22:09:09,295 main.ToolchainVariables_MPI_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib (self: [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib']]) | |
== 2013-12-11 22:09:09,295 main.ToolchainVariables_LAPACK_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] [] | |
== 2013-12-11 22:09:09,296 main.ToolchainVariables_LAPACK_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']]) | |
== 2013-12-11 22:09:09,296 main.ToolchainVariables_FFT_STATIC_LIBS DEBUG sanitize: to_remove in [['fftw3']] [] | |
== 2013-12-11 22:09:09,296 main.ToolchainVariables_FFT_STATIC_LIBS DEBUG __str__: return libfftw3.a (self: [['fftw3']]) | |
== 2013-12-11 22:09:09,296 main.ToolchainVariables_CXXFLAGS DEBUG __str__: return -fPIC -O3 -march=native (self: [['fPIC'], ['O3'], ['march=native']]) | |
== 2013-12-11 22:09:09,297 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] [0] | |
== 2013-12-11 22:09:09,297 main.ToolchainVariables_BLAS_LAPACK_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']]) | |
== 2013-12-11 22:09:09,297 main.ToolchainVariables_LIBFFT DEBUG sanitize: to_remove in [['fftw3']] [] | |
== 2013-12-11 22:09:09,297 main.ToolchainVariables_LIBFFT DEBUG __str__: return -lfftw3 (self: [['fftw3']]) | |
== 2013-12-11 22:09:09,297 main.ToolchainVariables_MPICC DEBUG __str__: return mpicc (self: [['mpicc', '']]) | |
== 2013-12-11 22:09:09,298 main.ToolchainVariables_MPI_LIB_STATIC DEBUG sanitize: to_remove in [[]] [] | |
== 2013-12-11 22:09:09,298 main.ToolchainVariables_MPI_LIB_STATIC DEBUG __str__: return (self: [[]]) | |
== 2013-12-11 22:09:09,298 main.ToolchainVariables_LIBS DEBUG sanitize: to_remove in [['m'], ['pthread']] [] | |
== 2013-12-11 22:09:09,298 main.ToolchainVariables_LIBS DEBUG __str__: return -lm -lpthread (self: [['m'], ['pthread']]) | |
== 2013-12-11 22:09:09,299 main.ToolchainVariables_LIBLAPACK DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,299 main.ToolchainVariables_LIBLAPACK DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,299 main.ToolchainVariables_SCALAPACK_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib']] [] | |
== 2013-12-11 22:09:09,299 main.ToolchainVariables_SCALAPACK_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib (self: [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib']]) | |
== 2013-12-11 22:09:09,299 main.ToolchainVariables_FFTW_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']] [] | |
== 2013-12-11 22:09:09,300 main.ToolchainVariables_FFTW_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/FFTW/3.3.3/include (self: [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']]) | |
== 2013-12-11 22:09:09,300 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG sanitize: to_remove in [['scalapack'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,300 main.ToolchainVariables_LIBSCALAPACK_MT_ONLY DEBUG __str__: return -lscalapack -lgfortran (self: [['scalapack'], ['gfortran']]) | |
== 2013-12-11 22:09:09,300 main.ToolchainVariables_LIBLAPACK_MT DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,301 main.ToolchainVariables_LIBLAPACK_MT DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,301 main.ToolchainVariables_FLIBS DEBUG sanitize: to_remove in [['gfortran']] [] | |
== 2013-12-11 22:09:09,301 main.ToolchainVariables_FLIBS DEBUG __str__: return -lgfortran (self: [['gfortran']]) | |
== 2013-12-11 22:09:09,301 main.ToolchainVariables_FFTW_STATIC_LIBS DEBUG sanitize: to_remove in [['fftw3']] [] | |
== 2013-12-11 22:09:09,302 main.ToolchainVariables_FFTW_STATIC_LIBS DEBUG __str__: return libfftw3.a (self: [['fftw3']]) | |
== 2013-12-11 22:09:09,302 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,302 main.ToolchainVariables_BLAS_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,302 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG sanitize: to_remove in [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran'], ['pthread']] [3, 2, 1] | |
== 2013-12-11 22:09:09,303 main.ToolchainVariables_SCALAPACK_MT_STATIC_LIBS DEBUG __str__: return libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a (self: [['scalapack'], ['openblas'], ['gfortran'], ['pthread']]) | |
== 2013-12-11 22:09:09,303 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG sanitize: to_remove in [['scalapack'], ['openblas'], ['openblas'], ['pthread'], ['gfortran'], ['gfortran'], ['gfortran']] [5, 4, 1] | |
== 2013-12-11 22:09:09,303 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG idx 1 len 4 | |
== 2013-12-11 22:09:09,303 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG sanitize: JOIN_BEGIN_END idx 1 joining -lopenblas and -lscalapack | |
== 2013-12-11 22:09:09,304 main.ToolchainVariables_LIBSCALAPACK_MT DEBUG __str__: return -lscalapack -lopenblas -lpthread -lgfortran (self: [['scalapack', 'openblas'], ['pthread'], ['gfortran']]) | |
== 2013-12-11 22:09:09,304 main.ToolchainVariables_F90 DEBUG __str__: return gfortran (self: [['gfortran', None]]) | |
== 2013-12-11 22:09:09,304 main.ToolchainVariables_OMPI_F77 DEBUG __str__: return gfortran (self: [['gfortran']]) | |
== 2013-12-11 22:09:09,304 main.ToolchainVariables_FFT_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']] [] | |
== 2013-12-11 22:09:09,304 main.ToolchainVariables_FFT_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/FFTW/3.3.3/include (self: [['/import/bc2/soft/centos6/software/FFTW/3.3.3/include']]) | |
== 2013-12-11 22:09:09,305 main.ToolchainVariables_F90FLAGS DEBUG __str__: return -fPIC -O3 -march=native (self: [['fPIC'], ['O3'], ['march=native']]) | |
== 2013-12-11 22:09:09,305 main.ToolchainVariables_MPICXX DEBUG __str__: return mpicxx (self: [['mpicxx', '']]) | |
== 2013-12-11 22:09:09,305 main.ToolchainVariables_BLAS_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] [] | |
== 2013-12-11 22:09:09,305 main.ToolchainVariables_BLAS_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']]) | |
== 2013-12-11 22:09:09,306 main.ToolchainVariables_FFT_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']] [] | |
== 2013-12-11 22:09:09,306 main.ToolchainVariables_FFT_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/FFTW/3.3.3/lib (self: [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']]) | |
== 2013-12-11 22:09:09,306 main.ToolchainVariables_LDFLAGS DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib'], ['/import/bc2/soft/centos6/software/bzip2/1.0.6/lib'], ['/import/bc2/soft/centos6/software/zlib/1.2.8/lib'], ['/import/bc2/soft/centos6/software/libreadline/6.2/lib'], ['/import/bc2/soft/centos6/software/ncurses/5.9/lib']] [1] | |
== 2013-12-11 22:09:09,306 main.ToolchainVariables_LDFLAGS DEBUG __str__: return -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib (self: [['/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib'], ['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib'], ['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib'], ['/import/bc2/soft/centos6/software/bzip2/1.0.6/lib'], ['/import/bc2/soft/centos6/software/zlib/1.2.8/lib'], ['/import/bc2/soft/centos6/software/libreadline/6.2/lib'], ['/import/bc2/soft/centos6/software/ncurses/5.9/lib']]) | |
== 2013-12-11 22:09:09,307 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran'], ['openblas'], ['gfortran']] [1, 0] | |
== 2013-12-11 22:09:09,307 main.ToolchainVariables_BLAS_LAPACK_MT_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,307 main.ToolchainVariables_CC DEBUG __str__: return gcc (self: [['gcc', None]]) | |
== 2013-12-11 22:09:09,307 main.ToolchainVariables_FFLAGS DEBUG __str__: return -fPIC -O3 -march=native (self: [['fPIC'], ['O3'], ['march=native']]) | |
== 2013-12-11 22:09:09,308 main.ToolchainVariables_MPIF90 DEBUG __str__: return mpif90 (self: [['mpif90', None]]) | |
== 2013-12-11 22:09:09,308 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,308 main.ToolchainVariables_LAPACK_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,308 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,309 main.ToolchainVariables_LIBLAPACK_ONLY DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,309 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,309 main.ToolchainVariables_LIBLAPACK_MT_ONLY DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,309 main.ToolchainVariables_LIBBLAS DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,310 main.ToolchainVariables_LIBBLAS DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,310 main.ToolchainVariables_SCALAPACK_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include']] [] | |
== 2013-12-11 22:09:09,310 main.ToolchainVariables_SCALAPACK_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include (self: [['/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include']]) | |
== 2013-12-11 22:09:09,310 main.ToolchainVariables_OMPI_CC DEBUG __str__: return gcc (self: [['gcc']]) | |
== 2013-12-11 22:09:09,311 main.ToolchainVariables_OPTFLAGS DEBUG __str__: return -O3 -march=native (self: [['O3'], ['march=native']]) | |
== 2013-12-11 22:09:09,311 main.ToolchainVariables_PRECFLAGS DEBUG __str__: first is None (self []) | |
== 2013-12-11 22:09:09,311 main.ToolchainVariables_F77 DEBUG __str__: return gfortran (self: [['gfortran', None]]) | |
== 2013-12-11 22:09:09,311 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG sanitize: to_remove in [['scalapack'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,311 main.ToolchainVariables_LIBSCALAPACK_ONLY DEBUG __str__: return -lscalapack -lgfortran (self: [['scalapack'], ['gfortran']]) | |
== 2013-12-11 22:09:09,312 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,312 main.ToolchainVariables_LAPACK_MT_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,312 main.ToolchainVariables_LAPACK_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']] [] | |
== 2013-12-11 22:09:09,312 main.ToolchainVariables_LAPACK_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib']]) | |
== 2013-12-11 22:09:09,313 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran'], ['openblas'], ['gfortran']] [1, 0] | |
== 2013-12-11 22:09:09,313 main.ToolchainVariables_BLAS_LAPACK_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,313 main.ToolchainVariables_MPIF77 DEBUG __str__: return mpif77 (self: [['mpif77', None]]) | |
== 2013-12-11 22:09:09,313 main.ToolchainVariables_LIBBLAS_MT DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,314 main.ToolchainVariables_LIBBLAS_MT DEBUG __str__: return -lopenblas -lgfortran (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,314 main.ToolchainVariables_CXX DEBUG __str__: return g++ (self: [['g++', None]]) | |
== 2013-12-11 22:09:09,314 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include'], ['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] [0] | |
== 2013-12-11 22:09:09,314 main.ToolchainVariables_BLAS_LAPACK_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']]) | |
== 2013-12-11 22:09:09,314 main.ToolchainVariables_OMPI_FC DEBUG __str__: return gfortran (self: [['gfortran']]) | |
== 2013-12-11 22:09:09,315 main.ToolchainVariables_BLAS_INC_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']] [] | |
== 2013-12-11 22:09:09,315 main.ToolchainVariables_BLAS_INC_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include (self: [['/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include']]) | |
== 2013-12-11 22:09:09,315 main.ToolchainVariables_MPI_LIB_SHARED DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so']] [] | |
== 2013-12-11 22:09:09,315 main.ToolchainVariables_MPI_LIB_SHARED DEBUG __str__: return /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so (self: [['/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so']]) | |
== 2013-12-11 22:09:09,316 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG sanitize: to_remove in [['scalapack'], ['gfortran'], ['openblas'], ['gfortran'], ['openblas'], ['gfortran']] [3, 2, 1] | |
== 2013-12-11 22:09:09,316 main.ToolchainVariables_SCALAPACK_STATIC_LIBS DEBUG __str__: return libscalapack.a,libopenblas.a,libgfortran.a (self: [['scalapack'], ['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,316 main.ToolchainVariables_CFLAGS DEBUG __str__: return -fPIC -O3 -march=native (self: [['fPIC'], ['O3'], ['march=native']]) | |
== 2013-12-11 22:09:09,316 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG sanitize: to_remove in [['openblas'], ['gfortran']] [] | |
== 2013-12-11 22:09:09,317 main.ToolchainVariables_BLAS_MT_STATIC_LIBS DEBUG __str__: return libopenblas.a,libgfortran.a (self: [['openblas'], ['gfortran']]) | |
== 2013-12-11 22:09:09,317 main.ToolchainVariables_FFTW_LIB_DIR DEBUG sanitize: to_remove in [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']] [] | |
== 2013-12-11 22:09:09,317 main.ToolchainVariables_FFTW_LIB_DIR DEBUG __str__: return /import/bc2/soft/centos6/software/FFTW/3.3.3/lib (self: [['/import/bc2/soft/centos6/software/FFTW/3.3.3/lib']]) | |
== 2013-12-11 22:09:09,317 main.ToolchainVariables_OMPI_CXX DEBUG __str__: return g++ (self: [['g++']]) | |
== 2013-12-11 22:09:09,317 main.Goolf DEBUG _setenv_variables: setting variables: donotset=False | |
== 2013-12-11 22:09:09,318 main.Goolf DEBUG _setenv_variables: setting environment variable CPPFLAGS to -I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include | |
== 2013-12-11 22:09:09,318 main.environment INFO Environment variable CPPFLAGS set to -I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include | |
== 2013-12-11 22:09:09,318 main.environment INFO Environment variable EBVARCPPFLAGS set to -I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include | |
== 2013-12-11 22:09:09,318 main.Goolf DEBUG _setenv_variables: setting environment variable MPI_INC_DIR to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/include | |
== 2013-12-11 22:09:09,318 main.environment INFO Environment variable MPI_INC_DIR set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/include | |
== 2013-12-11 22:09:09,319 main.environment INFO Environment variable EBVARMPI_INC_DIR set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/include | |
== 2013-12-11 22:09:09,319 main.Goolf DEBUG _setenv_variables: setting environment variable LIBSCALAPACK to -lscalapack -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,319 main.environment INFO Environment variable LIBSCALAPACK set to -lscalapack -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,319 main.environment INFO Environment variable EBVARLIBSCALAPACK set to -lscalapack -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,319 main.Goolf DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib | |
== 2013-12-11 22:09:09,320 main.environment INFO Environment variable MPI_LIB_DIR set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib | |
== 2013-12-11 22:09:09,320 main.environment INFO Environment variable EBVARMPI_LIB_DIR set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib | |
== 2013-12-11 22:09:09,320 main.Goolf DEBUG _setenv_variables: setting environment variable LAPACK_INC_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,320 main.environment INFO Environment variable LAPACK_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,320 main.environment INFO Environment variable EBVARLAPACK_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,321 main.Goolf DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS to libfftw3.a | |
== 2013-12-11 22:09:09,321 main.environment INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a | |
== 2013-12-11 22:09:09,321 main.environment INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a | |
== 2013-12-11 22:09:09,321 main.Goolf DEBUG _setenv_variables: setting environment variable CXXFLAGS to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,321 main.environment INFO Environment variable CXXFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,322 main.environment INFO Environment variable EBVARCXXFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,322 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_LIB_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,322 main.environment INFO Environment variable BLAS_LAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,322 main.environment INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,322 main.Goolf DEBUG _setenv_variables: setting environment variable MPICC to mpicc | |
== 2013-12-11 22:09:09,323 main.environment INFO Environment variable MPICC set to mpicc | |
== 2013-12-11 22:09:09,323 main.environment INFO Environment variable EBVARMPICC set to mpicc | |
== 2013-12-11 22:09:09,323 main.Goolf DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to | |
== 2013-12-11 22:09:09,323 main.environment INFO Environment variable MPI_LIB_STATIC set to | |
== 2013-12-11 22:09:09,323 main.environment INFO Environment variable EBVARMPI_LIB_STATIC set to | |
== 2013-12-11 22:09:09,324 main.Goolf DEBUG _setenv_variables: setting environment variable LIBS to -lm -lpthread | |
== 2013-12-11 22:09:09,324 main.environment INFO Environment variable LIBS set to -lm -lpthread | |
== 2013-12-11 22:09:09,324 main.environment INFO Environment variable EBVARLIBS set to -lm -lpthread | |
== 2013-12-11 22:09:09,324 main.Goolf DEBUG _setenv_variables: setting environment variable LIBLAPACK to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,324 main.environment INFO Environment variable LIBLAPACK set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,325 main.environment INFO Environment variable EBVARLIBLAPACK set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,325 main.Goolf DEBUG _setenv_variables: setting environment variable SCALAPACK_LIB_DIR to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib | |
== 2013-12-11 22:09:09,325 main.environment INFO Environment variable SCALAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib | |
== 2013-12-11 22:09:09,325 main.environment INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib | |
== 2013-12-11 22:09:09,325 main.Goolf DEBUG _setenv_variables: setting environment variable PRECFLAGS to | |
== 2013-12-11 22:09:09,326 main.environment INFO Environment variable PRECFLAGS set to | |
== 2013-12-11 22:09:09,326 main.environment INFO Environment variable EBVARPRECFLAGS set to | |
== 2013-12-11 22:09:09,326 main.Goolf DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT_ONLY to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,326 main.environment INFO Environment variable LIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,326 main.environment INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,327 main.Goolf DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,327 main.environment INFO Environment variable LIBLAPACK_MT set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,327 main.environment INFO Environment variable EBVARLIBLAPACK_MT set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,327 main.Goolf DEBUG _setenv_variables: setting environment variable FLIBS to -lgfortran | |
== 2013-12-11 22:09:09,327 main.environment INFO Environment variable FLIBS set to -lgfortran | |
== 2013-12-11 22:09:09,328 main.environment INFO Environment variable EBVARFLIBS set to -lgfortran | |
== 2013-12-11 22:09:09,328 main.Goolf DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS to libfftw3.a | |
== 2013-12-11 22:09:09,328 main.environment INFO Environment variable FFTW_STATIC_LIBS set to libfftw3.a | |
== 2013-12-11 22:09:09,328 main.environment INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3.a | |
== 2013-12-11 22:09:09,328 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,329 main.environment INFO Environment variable BLAS_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,329 main.environment INFO Environment variable EBVARBLAS_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,329 main.Goolf DEBUG _setenv_variables: setting environment variable SCALAPACK_MT_STATIC_LIBS to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a | |
== 2013-12-11 22:09:09,329 main.environment INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a | |
== 2013-12-11 22:09:09,329 main.environment INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a | |
== 2013-12-11 22:09:09,330 main.Goolf DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT to -lscalapack -lopenblas -lpthread -lgfortran | |
== 2013-12-11 22:09:09,330 main.environment INFO Environment variable LIBSCALAPACK_MT set to -lscalapack -lopenblas -lpthread -lgfortran | |
== 2013-12-11 22:09:09,330 main.environment INFO Environment variable EBVARLIBSCALAPACK_MT set to -lscalapack -lopenblas -lpthread -lgfortran | |
== 2013-12-11 22:09:09,330 main.Goolf DEBUG _setenv_variables: setting environment variable F90 to gfortran | |
== 2013-12-11 22:09:09,330 main.environment INFO Environment variable F90 set to gfortran | |
== 2013-12-11 22:09:09,331 main.environment INFO Environment variable EBVARF90 set to gfortran | |
== 2013-12-11 22:09:09,331 main.Goolf DEBUG _setenv_variables: setting environment variable OMPI_F77 to gfortran | |
== 2013-12-11 22:09:09,331 main.environment INFO Environment variable OMPI_F77 set to gfortran | |
== 2013-12-11 22:09:09,331 main.environment INFO Environment variable EBVAROMPI_F77 set to gfortran | |
== 2013-12-11 22:09:09,331 main.Goolf DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_ONLY to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,332 main.environment INFO Environment variable LIBSCALAPACK_ONLY set to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,332 main.environment INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -lscalapack -lgfortran | |
== 2013-12-11 22:09:09,332 main.Goolf DEBUG _setenv_variables: setting environment variable F90FLAGS to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,332 main.environment INFO Environment variable F90FLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,332 main.environment INFO Environment variable EBVARF90FLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,333 main.Goolf DEBUG _setenv_variables: setting environment variable MPICXX to mpicxx | |
== 2013-12-11 22:09:09,333 main.environment INFO Environment variable MPICXX set to mpicxx | |
== 2013-12-11 22:09:09,333 main.environment INFO Environment variable EBVARMPICXX set to mpicxx | |
== 2013-12-11 22:09:09,333 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_LIB_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,333 main.environment INFO Environment variable BLAS_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,334 main.environment INFO Environment variable EBVARBLAS_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,334 main.Goolf DEBUG _setenv_variables: setting environment variable FFT_LIB_DIR to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,334 main.environment INFO Environment variable FFT_LIB_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,334 main.environment INFO Environment variable EBVARFFT_LIB_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,334 main.Goolf DEBUG _setenv_variables: setting environment variable LIBFFT to -lfftw3 | |
== 2013-12-11 22:09:09,335 main.environment INFO Environment variable LIBFFT set to -lfftw3 | |
== 2013-12-11 22:09:09,335 main.environment INFO Environment variable EBVARLIBFFT set to -lfftw3 | |
== 2013-12-11 22:09:09,335 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_MT_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,335 main.environment INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,335 main.environment INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,336 main.Goolf DEBUG _setenv_variables: setting environment variable CC to gcc | |
== 2013-12-11 22:09:09,336 main.environment INFO Environment variable CC set to gcc | |
== 2013-12-11 22:09:09,336 main.environment INFO Environment variable EBVARCC set to gcc | |
== 2013-12-11 22:09:09,336 main.Goolf DEBUG _setenv_variables: setting environment variable FFLAGS to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,336 main.environment INFO Environment variable FFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,337 main.environment INFO Environment variable EBVARFFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,337 main.Goolf DEBUG _setenv_variables: setting environment variable MPIF90 to mpif90 | |
== 2013-12-11 22:09:09,337 main.environment INFO Environment variable MPIF90 set to mpif90 | |
== 2013-12-11 22:09:09,337 main.environment INFO Environment variable EBVARMPIF90 set to mpif90 | |
== 2013-12-11 22:09:09,337 main.Goolf DEBUG _setenv_variables: setting environment variable LAPACK_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,338 main.environment INFO Environment variable LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,338 main.environment INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,338 main.Goolf DEBUG _setenv_variables: setting environment variable MPIF77 to mpif77 | |
== 2013-12-11 22:09:09,338 main.environment INFO Environment variable MPIF77 set to mpif77 | |
== 2013-12-11 22:09:09,338 main.environment INFO Environment variable EBVARMPIF77 set to mpif77 | |
== 2013-12-11 22:09:09,339 main.Goolf DEBUG _setenv_variables: setting environment variable LIBBLAS_MT to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,339 main.environment INFO Environment variable LIBBLAS_MT set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,339 main.environment INFO Environment variable EBVARLIBBLAS_MT set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,339 main.Goolf DEBUG _setenv_variables: setting environment variable LIBBLAS to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,339 main.environment INFO Environment variable LIBBLAS set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,340 main.environment INFO Environment variable EBVARLIBBLAS set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,340 main.Goolf DEBUG _setenv_variables: setting environment variable SCALAPACK_INC_DIR to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include | |
== 2013-12-11 22:09:09,340 main.environment INFO Environment variable SCALAPACK_INC_DIR set to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include | |
== 2013-12-11 22:09:09,340 main.environment INFO Environment variable EBVARSCALAPACK_INC_DIR set to /import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include | |
== 2013-12-11 22:09:09,340 main.Goolf DEBUG _setenv_variables: setting environment variable OMPI_CC to gcc | |
== 2013-12-11 22:09:09,341 main.environment INFO Environment variable OMPI_CC set to gcc | |
== 2013-12-11 22:09:09,341 main.environment INFO Environment variable EBVAROMPI_CC set to gcc | |
== 2013-12-11 22:09:09,341 main.Goolf DEBUG _setenv_variables: setting environment variable OPTFLAGS to -O3 -march=native | |
== 2013-12-11 22:09:09,341 main.environment INFO Environment variable OPTFLAGS set to -O3 -march=native | |
== 2013-12-11 22:09:09,341 main.environment INFO Environment variable EBVAROPTFLAGS set to -O3 -march=native | |
== 2013-12-11 22:09:09,342 main.Goolf DEBUG _setenv_variables: setting environment variable FFTW_INC_DIR to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,342 main.environment INFO Environment variable FFTW_INC_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,342 main.environment INFO Environment variable EBVARFFTW_INC_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,342 main.Goolf DEBUG _setenv_variables: setting environment variable F77 to gfortran | |
== 2013-12-11 22:09:09,342 main.environment INFO Environment variable F77 set to gfortran | |
== 2013-12-11 22:09:09,343 main.environment INFO Environment variable EBVARF77 set to gfortran | |
== 2013-12-11 22:09:09,343 main.Goolf DEBUG _setenv_variables: setting environment variable FFT_INC_DIR to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,343 main.environment INFO Environment variable FFT_INC_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,343 main.environment INFO Environment variable EBVARFFT_INC_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/include | |
== 2013-12-11 22:09:09,343 main.Goolf DEBUG _setenv_variables: setting environment variable LAPACK_MT_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,344 main.environment INFO Environment variable LAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,344 main.environment INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,344 main.Goolf DEBUG _setenv_variables: setting environment variable LAPACK_LIB_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,344 main.environment INFO Environment variable LAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,344 main.environment INFO Environment variable EBVARLAPACK_LIB_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib | |
== 2013-12-11 22:09:09,345 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,345 main.environment INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,345 main.environment INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,345 main.Goolf DEBUG _setenv_variables: setting environment variable LIBLAPACK_ONLY to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,345 main.environment INFO Environment variable LIBLAPACK_ONLY set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,346 main.environment INFO Environment variable EBVARLIBLAPACK_ONLY set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,346 main.Goolf DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT_ONLY to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,346 main.environment INFO Environment variable LIBLAPACK_MT_ONLY set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,346 main.environment INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lopenblas -lgfortran | |
== 2013-12-11 22:09:09,346 main.Goolf DEBUG _setenv_variables: setting environment variable LDFLAGS to -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib | |
== 2013-12-11 22:09:09,347 main.environment INFO Environment variable LDFLAGS set to -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib | |
== 2013-12-11 22:09:09,347 main.environment INFO Environment variable EBVARLDFLAGS set to -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib | |
== 2013-12-11 22:09:09,347 main.Goolf DEBUG _setenv_variables: setting environment variable CXX to g++ | |
== 2013-12-11 22:09:09,347 main.environment INFO Environment variable CXX set to g++ | |
== 2013-12-11 22:09:09,347 main.environment INFO Environment variable EBVARCXX set to g++ | |
== 2013-12-11 22:09:09,348 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_INC_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,348 main.environment INFO Environment variable BLAS_LAPACK_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,348 main.environment INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,348 main.Goolf DEBUG _setenv_variables: setting environment variable OMPI_FC to gfortran | |
== 2013-12-11 22:09:09,348 main.environment INFO Environment variable OMPI_FC set to gfortran | |
== 2013-12-11 22:09:09,349 main.environment INFO Environment variable EBVAROMPI_FC set to gfortran | |
== 2013-12-11 22:09:09,349 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_INC_DIR to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,349 main.environment INFO Environment variable BLAS_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,349 main.environment INFO Environment variable EBVARBLAS_INC_DIR set to /import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include | |
== 2013-12-11 22:09:09,349 main.Goolf DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so | |
== 2013-12-11 22:09:09,350 main.environment INFO Environment variable MPI_LIB_SHARED set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so | |
== 2013-12-11 22:09:09,350 main.environment INFO Environment variable EBVARMPI_LIB_SHARED set to /import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so | |
== 2013-12-11 22:09:09,350 main.Goolf DEBUG _setenv_variables: setting environment variable SCALAPACK_STATIC_LIBS to libscalapack.a,libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,350 main.environment INFO Environment variable SCALAPACK_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,350 main.environment INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libscalapack.a,libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,351 main.Goolf DEBUG _setenv_variables: setting environment variable CFLAGS to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,351 main.environment INFO Environment variable CFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,351 main.environment INFO Environment variable EBVARCFLAGS set to -fPIC -O3 -march=native | |
== 2013-12-11 22:09:09,351 main.Goolf DEBUG _setenv_variables: setting environment variable BLAS_MT_STATIC_LIBS to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,351 main.environment INFO Environment variable BLAS_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,352 main.environment INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libopenblas.a,libgfortran.a | |
== 2013-12-11 22:09:09,352 main.Goolf DEBUG _setenv_variables: setting environment variable FFTW_LIB_DIR to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,352 main.environment INFO Environment variable FFTW_LIB_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,352 main.environment INFO Environment variable EBVARFFTW_LIB_DIR set to /import/bc2/soft/centos6/software/FFTW/3.3.3/lib | |
== 2013-12-11 22:09:09,353 main.Goolf DEBUG _setenv_variables: setting environment variable OMPI_CXX to g++ | |
== 2013-12-11 22:09:09,353 main.environment INFO Environment variable OMPI_CXX set to g++ | |
== 2013-12-11 22:09:09,353 main.environment INFO Environment variable EBVAROMPI_CXX set to g++ | |
== 2013-12-11 22:09:09,353 main.EB_Python DEBUG Changed to real build directory /tmp/easybuild/Python/2.7.5/goolf-1.4.10/ | |
== 2013-12-11 22:09:09,354 main.EB_Python INFO configuring... | |
== 2013-12-11 22:09:09,354 main.EB_Python INFO Skipping configure step | |
== 2013-12-11 22:09:09,354 main.EB_Python INFO building... | |
== 2013-12-11 22:09:09,354 main.EB_Python INFO Skipping build step | |
== 2013-12-11 22:09:09,354 main.EB_Python INFO testing... | |
== 2013-12-11 22:09:09,355 main.EB_Python INFO Skipping test step | |
== 2013-12-11 22:09:09,355 main.EB_Python INFO installing... | |
== 2013-12-11 22:09:09,355 main.EB_Python INFO Skipping install step | |
== 2013-12-11 22:09:09,355 main.EB_Python INFO taking care of extensions... | |
== 2013-12-11 22:09:09,355 main.EB_Python INFO Starting extensions step | |
== 2013-12-11 22:09:09,357 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': ['/tmp/easybuild/Python/2.7.5/goolf-1.4.10/', 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [{}, "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:09,358 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,358 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,359 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,359 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:09:09,359 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:09:09,359 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:09,359 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:09,360 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [True, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': ['/tmp/easybuild/Python/2.7.5/goolf-1.4.10/', 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'prefix_opt': ['--prefix=', 'Prefix command line option for configure script', (1, 'easyblock-specific')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [16, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [{}, "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:09,362 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,362 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,362 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:09,363 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:09:09,363 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:09:09,363 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:09,363 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:09,363 main.EB_Python INFO Running method extensions_step part of step extensions | |
== 2013-12-11 22:09:09,381 main.module_generator DEBUG Fake mode: using /scratch/tmpQspQG8 (instead of /import/bc2/soft/centos6/modules) | |
== 2013-12-11 22:09:09,381 main.module_generator DEBUG Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x20e6a10> (eb_ns: False) | |
== 2013-12-11 22:09:09,381 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,382 main.module_generator DEBUG Module name Python/2.7.5 validated | |
== 2013-12-11 22:09:09,383 main.module_generator DEBUG Obtained module name Python/2.7.5 | |
== 2013-12-11 22:09:09,383 main.module_generator DEBUG Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x20e6a10> (eb_ns: False) | |
== 2013-12-11 22:09:09,383 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,384 main.module_generator DEBUG Module name Python/2.7.5 validated | |
== 2013-12-11 22:09:09,384 main.module_generator DEBUG Obtained module name Python/2.7.5 | |
== 2013-12-11 22:09:09,385 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:09:09,385 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,386 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:09:09,386 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:09:09,386 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:09:09,386 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,387 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:09:09,388 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:09:09,388 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'bzip2'} (eb_ns: False) | |
== 2013-12-11 22:09:09,388 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,389 main.module_generator DEBUG Module name bzip2/1.0.6 validated | |
== 2013-12-11 22:09:09,389 main.module_generator DEBUG Obtained module name bzip2/1.0.6 | |
== 2013-12-11 22:09:09,389 main.EB_Python DEBUG Adding bzip2/1.0.6 as a module dependency | |
== 2013-12-11 22:09:09,390 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'zlib'} (eb_ns: False) | |
== 2013-12-11 22:09:09,390 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,391 main.module_generator DEBUG Module name zlib/1.2.8 validated | |
== 2013-12-11 22:09:09,391 main.module_generator DEBUG Obtained module name zlib/1.2.8 | |
== 2013-12-11 22:09:09,391 main.EB_Python DEBUG Adding zlib/1.2.8 as a module dependency | |
== 2013-12-11 22:09:09,391 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '6.2', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'libreadline'} (eb_ns: False) | |
== 2013-12-11 22:09:09,392 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,392 main.module_generator DEBUG Module name libreadline/6.2 validated | |
== 2013-12-11 22:09:09,393 main.module_generator DEBUG Obtained module name libreadline/6.2 | |
== 2013-12-11 22:09:09,393 main.EB_Python DEBUG Adding libreadline/6.2 as a module dependency | |
== 2013-12-11 22:09:09,393 main.module_generator DEBUG Determining module name for {'dummy': False, 'versionsuffix': '', 'version': '5.9', 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'ncurses'} (eb_ns: False) | |
== 2013-12-11 22:09:09,393 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,394 main.module_generator DEBUG Module name ncurses/5.9 validated | |
== 2013-12-11 22:09:09,394 main.module_generator DEBUG Obtained module name ncurses/5.9 | |
== 2013-12-11 22:09:09,395 main.EB_Python DEBUG Adding ncurses/5.9 as a module dependency | |
== 2013-12-11 22:09:09,395 main.module_generator DEBUG Determining module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x20e6a10> (eb_ns: False) | |
== 2013-12-11 22:09:09,395 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:09,396 main.module_generator DEBUG Module name Python/2.7.5 validated | |
== 2013-12-11 22:09:09,396 main.module_generator DEBUG Obtained module name Python/2.7.5 | |
== 2013-12-11 22:09:09,397 main.EB_Python DEBUG make_module_extra added this: | |
setenv EBROOTPYTHON "$root" | |
setenv EBVERSIONPYTHON "2.7.5" | |
setenv EBDEVELPYTHON "$root/easybuild/Python-2.7.5-easybuild-devel" | |
== 2013-12-11 22:09:09,397 main.EB_Python INFO Added modulefile: /scratch/tmpQspQG8/all/Python/2.7.5 | |
== 2013-12-11 22:09:12,232 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:09:12,242 main.EB_Python DEBUG mod_paths: ['/scratch/tmpQspQG8/all', '/import/bc2/soft/centos6/modules/all', '/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:09:12,245 main.Lmod INFO $MODULEPATH set based on list of module paths: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,246 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:09:12,246 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:09:12,247 main.Lmod DEBUG Current MODULEPATH: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,248 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:12,248 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:12,395 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:12,496 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:09:12,497 main.Lmod DEBUG Current MODULEPATH: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,498 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:12,498 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:12,644 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:12,645 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,646 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:12,646 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:12,761 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:12,762 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,763 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:12,764 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:12,911 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:12,912 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:12,913 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:12,914 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,067 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,068 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,068 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,068 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,214 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,215 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,216 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,217 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,359 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,360 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,361 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,362 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,475 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,477 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,477 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,477 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,592 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,594 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,594 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,595 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,713 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,714 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,715 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,716 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,836 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,837 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,837 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,837 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:13,952 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:13,953 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:13,954 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:13,955 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,077 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,078 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,078 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,078 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,193 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,194 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,195 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,195 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,313 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,314 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,315 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,315 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,439 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,440 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,441 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,441 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,559 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,560 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,561 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,561 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,680 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,681 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,682 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,682 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,801 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:14,802 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:14,802 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:14,803 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /scratch/tmpQspQG8/all' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:14,921 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:17,777 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:09:17,792 main.Lmod DEBUG List of loaded modules before purge: None | |
== 2013-12-11 22:09:17,793 main.Lmod DEBUG Current MODULEPATH: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:17,794 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:17,794 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python purge ' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:18,162 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from [''] to ['/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:18,163 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_BUILDPATH (/tmp/easybuild) | |
== 2013-12-11 22:09:18,164 main.environment INFO Environment variable EASYBUILD_BUILDPATH set to /tmp/easybuild | |
== 2013-12-11 22:09:18,164 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_REPOSITORYPATH (/import/bc2/soft/centos6/installed_eb_files) | |
== 2013-12-11 22:09:18,165 main.environment INFO Environment variable EASYBUILD_REPOSITORYPATH set to /import/bc2/soft/centos6/installed_eb_files | |
== 2013-12-11 22:09:18,166 main.environment DEBUG Key in new environment found that is not in old one: EBDEVELEASYBUILD (/import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/EasyBuild-1.9.0-easybuild-devel) | |
== 2013-12-11 22:09:18,166 main.environment INFO Environment variable EBDEVELEASYBUILD set to /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/EasyBuild-1.9.0-easybuild-devel | |
== 2013-12-11 22:09:18,167 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable006_ (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) | |
== 2013-12-11 22:09:18,167 main.environment INFO Environment variable _ModuleTable006_ set to L2JpbzovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9jaGVtOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2NvbXBpbGVyOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVzL2RhdGE6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvZGV2ZWw6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbGFuZzovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9saWI6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbWF0aDovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9tcGk6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvbnVtbGliOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9tb2R1bGVz | |
== 2013-12-11 22:09:18,167 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_SOURCEPATH (/import/bc2/soft/centos6/source) | |
== 2013-12-11 22:09:18,167 main.environment INFO Environment variable EASYBUILD_SOURCEPATH set to /import/bc2/soft/centos6/source | |
== 2013-12-11 22:09:18,168 main.environment DEBUG Key in new environment found that is different from old one: LD_LIBRARY_PATH (/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib) | |
== 2013-12-11 22:09:18,168 main.environment INFO Environment variable LD_LIBRARY_PATH set to /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib | |
== 2013-12-11 22:09:18,168 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_INSTALLPATH (/import/bc2/soft/centos6) | |
== 2013-12-11 22:09:18,168 main.environment INFO Environment variable EASYBUILD_INSTALLPATH set to /import/bc2/soft/centos6 | |
== 2013-12-11 22:09:18,169 main.environment DEBUG Key in new environment found that is not in old one: LMOD_IGNORE_CACHE (1) | |
== 2013-12-11 22:09:18,169 main.environment INFO Environment variable LMOD_IGNORE_CACHE set to 1 | |
== 2013-12-11 22:09:18,169 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable003_ (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) | |
== 2013-12-11 22:09:18,170 main.environment INFO Environment variable _ModuleTable003_ set to L3NvZnQvY2VudG9zNi9zb2Z0d2FyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbImNfcmVidWlsZFRpbWUiXT04NjQwMCxbImNfc2hvcnRUaW1lIl09ZmFsc2UsZmFtaWx5PXt9LGluYWN0aXZlPXt9LG1UPXtFYXN5QnVpbGQ9e1siRk4iXT0iL2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvYWxsL0Vhc3lCdWlsZC8xLjkuMCIsWyJkZWZhdWx0Il09MSxbImZ1bGxOYW1lIl09IkVhc3lCdWlsZC8xLjkuMCIsWyJsb2FkT3JkZXIiXT0xLHByb3BUPXt9LFsic2hvcnQiXT0iRWFzeUJ1aWxkIixbInN0YXR1cyJdPSJhY3RpdmUiLH0sfSxtcGF0aEE9eyIvaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy9hbGwiLCIvaW1wb3J0L2JjMi9zb2Z0L2NlbnRv | |
== 2013-12-11 22:09:18,170 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable004_ (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) | |
== 2013-12-11 22:09:18,170 main.environment INFO Environment variable _ModuleTable004_ set to 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 | |
== 2013-12-11 22:09:18,170 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_MODULES_TOOL (Lmod) | |
== 2013-12-11 22:09:18,171 main.environment INFO Environment variable EASYBUILD_MODULES_TOOL set to Lmod | |
== 2013-12-11 22:09:18,171 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable005_ (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) | |
== 2013-12-11 22:09:18,171 main.environment INFO Environment variable _ModuleTable005_ set to 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 | |
== 2013-12-11 22:09:18,171 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_MODULE_NAMING_SCHEME (JustAppNameAndVersion) | |
== 2013-12-11 22:09:18,172 main.environment INFO Environment variable EASYBUILD_MODULE_NAMING_SCHEME set to JustAppNameAndVersion | |
== 2013-12-11 22:09:18,172 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable007_ (L3N5c3RlbTovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy90b29sY2hhaW46L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdG9vbHM6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdmlzOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9zb2Z0d2FyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsWyJ2ZXJzaW9uIl09Mix9) | |
== 2013-12-11 22:09:18,172 main.environment INFO Environment variable _ModuleTable007_ set to L3N5c3RlbTovaW1wb3J0L2JjMi9zb2Z0L2NlbnRvczYvbW9kdWxlcy90b29sY2hhaW46L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdG9vbHM6L2ltcG9ydC9iYzIvc29mdC9jZW50b3M2L21vZHVsZXMvdmlzOi9pbXBvcnQvYmMyL3NvZnQvY2VudG9zNi9zb2Z0d2FyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsWyJ2ZXJzaW9uIl09Mix9 | |
== 2013-12-11 22:09:18,172 main.environment DEBUG Key in new environment found that is not in old one: PYTHONPATH (/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2:/import/bc2/soft/centos6/software/EasyBuild/1.9.0) | |
== 2013-12-11 22:09:18,173 main.environment INFO Environment variable PYTHONPATH set to /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2:/import/bc2/soft/centos6/software/EasyBuild/1.9.0 | |
== 2013-12-11 22:09:18,173 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable001_ (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) | |
== 2013-12-11 22:09:18,173 main.environment INFO Environment variable _ModuleTable001_ set to 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 | |
== 2013-12-11 22:09:18,174 main.environment DEBUG Key in new environment found that is different from old one: PATH (/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin:/import/bc2/soft/system/UGE/current/bin/lx-amd64:/import/bc2/home/admin/pub/pub/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:.:/import/bc2/soft/centos6/software/lua/5.1.4.5/bin:/import/bc2/soft/centos6/software/lmod/lmod/libexec) | |
== 2013-12-11 22:09:18,174 main.environment INFO Environment variable PATH set to /import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin:/import/bc2/soft/system/UGE/current/bin/lx-amd64:/import/bc2/home/admin/pub/pub/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:.:/import/bc2/soft/centos6/software/lua/5.1.4.5/bin:/import/bc2/soft/centos6/software/lmod/lmod/libexec | |
== 2013-12-11 22:09:18,174 main.environment DEBUG Key in new environment found that is not in old one: EBROOTEASYBUILD (/import/bc2/soft/centos6/software/EasyBuild/1.9.0) | |
== 2013-12-11 22:09:18,174 main.environment INFO Environment variable EBROOTEASYBUILD set to /import/bc2/soft/centos6/software/EasyBuild/1.9.0 | |
== 2013-12-11 22:09:18,175 main.environment DEBUG Key in new environment found that is not in old one: EBVERSIONEASYBUILD (1.9.0) | |
== 2013-12-11 22:09:18,175 main.environment INFO Environment variable EBVERSIONEASYBUILD set to 1.9.0 | |
== 2013-12-11 22:09:18,175 main.environment DEBUG Key in new environment found that is different from old one: MODULEPATH (/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core) | |
== 2013-12-11 22:09:18,175 main.environment INFO Environment variable MODULEPATH set to /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:18,176 main.environment DEBUG Key in new environment found that is not in old one: EASYBUILD_REPOSITORY (FileRepository) | |
== 2013-12-11 22:09:18,176 main.environment INFO Environment variable EASYBUILD_REPOSITORY set to FileRepository | |
== 2013-12-11 22:09:18,176 main.environment DEBUG Key in new environment found that is different from old one: LMOD_DEFAULT_MODULEPATH (/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core) | |
== 2013-12-11 22:09:18,177 main.environment INFO Environment variable LMOD_DEFAULT_MODULEPATH set to /import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:18,177 main.environment DEBUG Key in new environment found that is different from old one: _ModuleTable002_ (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) | |
== 2013-12-11 22:09:18,177 main.environment INFO Environment variable _ModuleTable002_ set to 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 | |
== 2013-12-11 22:09:18,177 main.environment DEBUG Key in old environment found that is not in new one: EBVARCC (gcc) | |
== 2013-12-11 22:09:18,178 main.environment DEBUG Key in old environment found that is not in new one: EBVARLAPACK_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,178 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPICC (mpicc) | |
== 2013-12-11 22:09:18,178 main.environment DEBUG Key in old environment found that is not in new one: EBVARSCALAPACK_INC_DIR (/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include) | |
== 2013-12-11 22:09:18,178 main.environment DEBUG Key in old environment found that is not in new one: MPICC (mpicc) | |
== 2013-12-11 22:09:18,179 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBLAPACK_MT (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,179 main.environment DEBUG Key in old environment found that is not in new one: EBVARLAPACK_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,179 main.environment DEBUG Key in old environment found that is not in new one: MPI_LIB_STATIC () | |
== 2013-12-11 22:09:18,180 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LAPACK_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,180 main.environment DEBUG Key in old environment found that is not in new one: LIBLAPACK (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,180 main.environment DEBUG Key in old environment found that is not in new one: SCALAPACK_LIB_DIR (/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib) | |
== 2013-12-11 22:09:18,180 main.environment DEBUG Key in old environment found that is not in new one: FFTW_INC_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/include) | |
== 2013-12-11 22:09:18,181 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFT_STATIC_LIBS (libfftw3.a) | |
== 2013-12-11 22:09:18,181 main.environment DEBUG Key in old environment found that is not in new one: LIBSCALAPACK_MT (-lscalapack -lopenblas -lpthread -lgfortran) | |
== 2013-12-11 22:09:18,181 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBLAPACK_ONLY (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,181 main.environment DEBUG Key in old environment found that is not in new one: EBVARCXXFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,182 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPIF90 (mpif90) | |
== 2013-12-11 22:09:18,182 main.environment DEBUG Key in old environment found that is not in new one: SCALAPACK_INC_DIR (/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include) | |
== 2013-12-11 22:09:18,182 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_LAPACK_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,182 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,183 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPIF77 (mpif77) | |
== 2013-12-11 22:09:18,183 main.environment DEBUG Key in old environment found that is not in new one: EBVARSCALAPACK_STATIC_LIBS (libscalapack.a,libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,183 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_LAPACK_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,183 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBSCALAPACK_ONLY (-lscalapack -lgfortran) | |
== 2013-12-11 22:09:18,184 main.environment DEBUG Key in old environment found that is not in new one: LIBBLAS_MT (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,184 main.environment DEBUG Key in old environment found that is not in new one: LAPACK_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,184 main.environment DEBUG Key in old environment found that is not in new one: CXXFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,185 main.environment DEBUG Key in old environment found that is not in new one: LIBLAPACK_ONLY (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,185 main.environment DEBUG Key in old environment found that is not in new one: CXX (g++) | |
== 2013-12-11 22:09:18,185 main.environment DEBUG Key in old environment found that is not in new one: OMPI_FC (gfortran) | |
== 2013-12-11 22:09:18,185 main.environment DEBUG Key in old environment found that is not in new one: EBVAROPTFLAGS (-O3 -march=native) | |
== 2013-12-11 22:09:18,186 main.environment DEBUG Key in old environment found that is not in new one: SCALAPACK_STATIC_LIBS (libscalapack.a,libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,186 main.environment DEBUG Key in old environment found that is not in new one: BLAS_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,186 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFT_LIB_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/lib) | |
== 2013-12-11 22:09:18,186 main.environment DEBUG Key in old environment found that is not in new one: FFT_STATIC_LIBS (libfftw3.a) | |
== 2013-12-11 22:09:18,187 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPI_LIB_STATIC () | |
== 2013-12-11 22:09:18,187 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,187 main.environment DEBUG Key in old environment found that is not in new one: EBVARF90FLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,187 main.environment DEBUG Key in old environment found that is not in new one: CC (gcc) | |
== 2013-12-11 22:09:18,188 main.environment DEBUG Key in old environment found that is not in new one: EBVARPRECFLAGS () | |
== 2013-12-11 22:09:18,188 main.environment DEBUG Key in old environment found that is not in new one: EBVARF77 (gfortran) | |
== 2013-12-11 22:09:18,188 main.environment DEBUG Key in old environment found that is not in new one: FFTW_STATIC_LIBS (libfftw3.a) | |
== 2013-12-11 22:09:18,188 main.environment DEBUG Key in old environment found that is not in new one: FFTW_LIB_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/lib) | |
== 2013-12-11 22:09:18,189 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPI_LIB_DIR (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib) | |
== 2013-12-11 22:09:18,189 main.environment DEBUG Key in old environment found that is not in new one: OMPI_F77 (gfortran) | |
== 2013-12-11 22:09:18,189 main.environment DEBUG Key in old environment found that is not in new one: EBVARLAPACK_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,190 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,190 main.environment DEBUG Key in old environment found that is not in new one: FFT_LIB_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/lib) | |
== 2013-12-11 22:09:18,190 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBLAPACK (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,190 main.environment DEBUG Key in old environment found that is not in new one: LIBFFT (-lfftw3) | |
== 2013-12-11 22:09:18,191 main.environment DEBUG Key in old environment found that is not in new one: FFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,191 main.environment DEBUG Key in old environment found that is not in new one: BLAS_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,191 main.environment DEBUG Key in old environment found that is not in new one: EBVARCXX (g++) | |
== 2013-12-11 22:09:18,191 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LAPACK_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,192 main.environment DEBUG Key in old environment found that is not in new one: EBVAROMPI_FC (gfortran) | |
== 2013-12-11 22:09:18,192 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,192 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPICXX (mpicxx) | |
== 2013-12-11 22:09:18,192 main.environment DEBUG Key in old environment found that is not in new one: OMPI_CXX (g++) | |
== 2013-12-11 22:09:18,193 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFTW_INC_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/include) | |
== 2013-12-11 22:09:18,193 main.environment DEBUG Key in old environment found that is not in new one: LIBSCALAPACK (-lscalapack -lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,193 main.environment DEBUG Key in old environment found that is not in new one: MPI_LIB_DIR (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib) | |
== 2013-12-11 22:09:18,193 main.environment DEBUG Key in old environment found that is not in new one: EBVARF90 (gfortran) | |
== 2013-12-11 22:09:18,194 main.environment DEBUG Key in old environment found that is not in new one: OPTFLAGS (-O3 -march=native) | |
== 2013-12-11 22:09:18,194 main.environment DEBUG Key in old environment found that is not in new one: LIBS (-lm -lpthread) | |
== 2013-12-11 22:09:18,194 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFTW_LIB_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/lib) | |
== 2013-12-11 22:09:18,194 main.environment DEBUG Key in old environment found that is not in new one: FLIBS (-lgfortran) | |
== 2013-12-11 22:09:18,195 main.environment DEBUG Key in old environment found that is not in new one: EBVAROMPI_F77 (gfortran) | |
== 2013-12-11 22:09:18,195 main.environment DEBUG Key in old environment found that is not in new one: F90 (gfortran) | |
== 2013-12-11 22:09:18,195 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBBLAS (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,196 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBSCALAPACK_MT_ONLY (-lscalapack -lgfortran) | |
== 2013-12-11 22:09:18,196 main.environment DEBUG Key in old environment found that is not in new one: LAPACK_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,196 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPI_INC_DIR (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include) | |
== 2013-12-11 22:09:18,196 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,197 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_LIB_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib) | |
== 2013-12-11 22:09:18,197 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_LAPACK_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,197 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LAPACK_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,197 main.environment DEBUG Key in old environment found that is not in new one: MPIF90 (mpif90) | |
== 2013-12-11 22:09:18,198 main.environment DEBUG Key in old environment found that is not in new one: CPPFLAGS (-I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include) | |
== 2013-12-11 22:09:18,198 main.environment DEBUG Key in old environment found that is not in new one: LIBLAPACK_MT_ONLY (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,198 main.environment DEBUG Key in old environment found that is not in new one: LIBBLAS (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,198 main.environment DEBUG Key in old environment found that is not in new one: MPICXX (mpicxx) | |
== 2013-12-11 22:09:18,199 main.environment DEBUG Key in old environment found that is not in new one: PRECFLAGS () | |
== 2013-12-11 22:09:18,199 main.environment DEBUG Key in old environment found that is not in new one: F77 (gfortran) | |
== 2013-12-11 22:09:18,199 main.environment DEBUG Key in old environment found that is not in new one: EBVARSCALAPACK_MT_STATIC_LIBS (libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a) | |
== 2013-12-11 22:09:18,199 main.environment DEBUG Key in old environment found that is not in new one: LIBSCALAPACK_ONLY (-lscalapack -lgfortran) | |
== 2013-12-11 22:09:18,200 main.environment DEBUG Key in old environment found that is not in new one: F90FLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,200 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBLAPACK_MT_ONLY (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,200 main.environment DEBUG Key in old environment found that is not in new one: EBVARMPI_LIB_SHARED (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so) | |
== 2013-12-11 22:09:18,200 main.environment DEBUG Key in old environment found that is not in new one: EBVAROMPI_CXX (g++) | |
== 2013-12-11 22:09:18,201 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBS (-lm -lpthread) | |
== 2013-12-11 22:09:18,201 main.environment DEBUG Key in old environment found that is not in new one: MPI_LIB_SHARED (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib/libmpi.so) | |
== 2013-12-11 22:09:18,201 main.environment DEBUG Key in old environment found that is not in new one: LIBLAPACK_MT (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,202 main.environment DEBUG Key in old environment found that is not in new one: EBVARSCALAPACK_LIB_DIR (/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib) | |
== 2013-12-11 22:09:18,202 main.environment DEBUG Key in old environment found that is not in new one: EBVARLAPACK_MT_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,202 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBSCALAPACK (-lscalapack -lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,202 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LAPACK_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,203 main.environment DEBUG Key in old environment found that is not in new one: MPI_INC_DIR (/import/bc2/soft/centos6/software/OpenMPI/1.6.4/include) | |
== 2013-12-11 22:09:18,203 main.environment DEBUG Key in old environment found that is not in new one: EBVARCPPFLAGS (-I/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include -I/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/include -I/import/bc2/soft/centos6/software/FFTW/3.3.3/include -I/import/bc2/soft/centos6/software/bzip2/1.0.6/include -I/import/bc2/soft/centos6/software/zlib/1.2.8/include -I/import/bc2/soft/centos6/software/libreadline/6.2/include -I/import/bc2/soft/centos6/software/ncurses/5.9/include) | |
== 2013-12-11 22:09:18,203 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBSCALAPACK_MT (-lscalapack -lopenblas -lpthread -lgfortran) | |
== 2013-12-11 22:09:18,203 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBBLAS_MT (-lopenblas -lgfortran) | |
== 2013-12-11 22:09:18,204 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFT_INC_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/include) | |
== 2013-12-11 22:09:18,204 main.environment DEBUG Key in old environment found that is not in new one: OMPI_CC (gcc) | |
== 2013-12-11 22:09:18,204 main.environment DEBUG Key in old environment found that is not in new one: LIBSCALAPACK_MT_ONLY (-lscalapack -lgfortran) | |
== 2013-12-11 22:09:18,204 main.environment DEBUG Key in old environment found that is not in new one: BLAS_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,205 main.environment DEBUG Key in old environment found that is not in new one: EBVARFLIBS (-lgfortran) | |
== 2013-12-11 22:09:18,205 main.environment DEBUG Key in old environment found that is not in new one: LDFLAGS (-L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib) | |
== 2013-12-11 22:09:18,205 main.environment DEBUG Key in old environment found that is not in new one: EBVAROMPI_CC (gcc) | |
== 2013-12-11 22:09:18,205 main.environment DEBUG Key in old environment found that is not in new one: CFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,206 main.environment DEBUG Key in old environment found that is not in new one: LAPACK_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,206 main.environment DEBUG Key in old environment found that is not in new one: EBVARLDFLAGS (-L/import/bc2/soft/centos6/software/GCC/4.7.2/lib64 -L/import/bc2/soft/centos6/software/GCC/4.7.2/lib -L/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib -L/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib -L/import/bc2/soft/centos6/software/FFTW/3.3.3/lib -L/import/bc2/soft/centos6/software/bzip2/1.0.6/lib -L/import/bc2/soft/centos6/software/zlib/1.2.8/lib -L/import/bc2/soft/centos6/software/libreadline/6.2/lib -L/import/bc2/soft/centos6/software/ncurses/5.9/lib) | |
== 2013-12-11 22:09:18,206 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBFFT (-lfftw3) | |
== 2013-12-11 22:09:18,207 main.environment DEBUG Key in old environment found that is not in new one: FFT_INC_DIR (/import/bc2/soft/centos6/software/FFTW/3.3.3/include) | |
== 2013-12-11 22:09:18,207 main.environment DEBUG Key in old environment found that is not in new one: LAPACK_INC_DIR (/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/include) | |
== 2013-12-11 22:09:18,207 main.environment DEBUG Key in old environment found that is not in new one: MPIF77 (mpif77) | |
== 2013-12-11 22:09:18,207 main.environment DEBUG Key in old environment found that is not in new one: EBVARCFLAGS (-fPIC -O3 -march=native) | |
== 2013-12-11 22:09:18,208 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFTW_STATIC_LIBS (libfftw3.a) | |
== 2013-12-11 22:09:18,208 main.environment DEBUG Key in old environment found that is not in new one: EBVARBLAS_LAPACK_STATIC_LIBS (libopenblas.a,libgfortran.a) | |
== 2013-12-11 22:09:18,208 main.environment DEBUG Key in old environment found that is not in new one: SCALAPACK_MT_STATIC_LIBS (libscalapack.a,libopenblas.a,libgfortran.a,libpthread.a) | |
== 2013-12-11 22:09:18,208 main.Lmod INFO $MODULEPATH set based on list of module paths: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:18,209 main.Lmod DEBUG Current MODULEPATH: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:18,209 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:18,209 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load Python/2.7.5' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:18,564 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:18,566 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,576 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,577 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,578 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,578 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,579 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,579 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,579 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,579 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,580 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,580 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,580 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,581 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,581 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,581 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,581 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,582 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,582 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,582 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,582 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,583 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,583 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,583 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,585 main.EB_Python INFO Found file setuptools-0.6c11.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/setuptools-0.6c11.tar.gz | |
== 2013-12-11 22:09:18,585 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,586 main.EB_Python DEBUG No patches found for extension setuptools. | |
== 2013-12-11 22:09:18,586 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,595 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,596 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,597 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,598 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,598 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,599 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,600 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,600 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,607 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,607 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,608 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,608 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,608 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,608 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,609 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,609 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,610 main.EB_Python INFO Found file nose-1.3.0.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/nose-1.3.0.tar.gz | |
== 2013-12-11 22:09:18,610 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,610 main.EB_Python DEBUG No patches found for extension nose. | |
== 2013-12-11 22:09:18,611 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,620 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,621 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,622 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,623 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,624 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,624 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,625 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,625 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,626 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,626 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,626 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,627 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,627 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,627 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,628 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,628 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,628 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,628 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,629 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,629 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,629 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,629 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,630 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,630 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,630 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,631 main.EB_Python INFO Found file numpy-1.7.0.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/numpy-1.7.0.tar.gz | |
== 2013-12-11 22:09:18,631 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,641 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,642 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,643 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,643 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,644 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,644 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,645 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,646 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,646 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,646 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,647 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,647 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,647 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,648 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,648 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,648 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,648 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,649 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,649 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,649 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,649 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,650 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,650 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,650 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,650 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,651 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,651 main.EB_Python INFO Found file numpy-1.7.0_distutils_multiple-lib-dirs.patch at /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-1.7.0_distutils_multiple-lib-dirs.patch | |
== 2013-12-11 22:09:18,652 main.EB_Python DEBUG File /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-1.7.0_distutils_multiple-lib-dirs.patch found for patch numpy-1.7.0_distutils_multiple-lib-dirs.patch | |
== 2013-12-11 22:09:18,652 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,661 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,662 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,663 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,664 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,664 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,665 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,666 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,666 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,667 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,667 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,667 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,668 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,668 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,668 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,668 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,669 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,669 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,669 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,670 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,670 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,670 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,670 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,671 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,671 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,671 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,671 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,672 main.EB_Python INFO Found file numpy-iqacml.patch at /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-iqacml.patch | |
== 2013-12-11 22:09:18,672 main.EB_Python DEBUG File /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-iqacml.patch found for patch numpy-iqacml.patch | |
== 2013-12-11 22:09:18,673 main.EB_Python INFO Fetched extension patches: [{'path': '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'name': 'numpy-1.7.0_distutils_multiple-lib-dirs.patch'}, {'path': '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-iqacml.patch', 'name': 'numpy-iqacml.patch'}] | |
== 2013-12-11 22:09:18,673 main.EB_Python DEBUG Found patches for extension numpy: ['/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-1.7.0_distutils_multiple-lib-dirs.patch', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs/p/Python/numpy-iqacml.patch'] | |
== 2013-12-11 22:09:18,673 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,683 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,683 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,684 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,685 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,685 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,686 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,686 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,687 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,687 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,687 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,687 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,688 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,688 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,688 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,689 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,689 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,689 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,689 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,690 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,690 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,690 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,690 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,691 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,691 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,691 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,692 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,692 main.EB_Python INFO Found file scipy-0.12.0.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/scipy-0.12.0.tar.gz | |
== 2013-12-11 22:09:18,693 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,693 main.EB_Python DEBUG No patches found for extension scipy. | |
== 2013-12-11 22:09:18,693 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,703 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,703 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,704 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,705 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,705 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,706 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,707 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,707 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,707 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,708 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,708 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,708 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,708 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,709 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,709 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,709 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,709 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,710 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,710 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,710 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,711 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,711 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,711 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,711 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,712 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,712 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,713 main.EB_Python INFO Found file mpi4py-1.3.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/mpi4py-1.3.tar.gz | |
== 2013-12-11 22:09:18,713 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,713 main.EB_Python DEBUG No patches found for extension mpi4py. | |
== 2013-12-11 22:09:18,714 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,723 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,724 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,724 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,725 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,726 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,726 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,726 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,727 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,727 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,727 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,728 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,728 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,728 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,728 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,729 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,729 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,729 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,730 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,730 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,730 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,730 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,731 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,731 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,731 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,731 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,732 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,732 main.EB_Python INFO Found file paycheck-1.0.2.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/paycheck-1.0.2.tar.gz | |
== 2013-12-11 22:09:18,733 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,733 main.EB_Python DEBUG No patches found for extension paycheck. | |
== 2013-12-11 22:09:18,733 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,743 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,744 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,744 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,745 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,746 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,746 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,747 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,747 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,747 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,748 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,748 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,748 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,749 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,749 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,749 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,749 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,750 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,750 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,750 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,750 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,751 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,751 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,751 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,751 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,752 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,752 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,753 main.EB_Python INFO Found file argparse-1.2.1.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/argparse-1.2.1.tar.gz | |
== 2013-12-11 22:09:18,753 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,753 main.EB_Python DEBUG No patches found for extension argparse. | |
== 2013-12-11 22:09:18,754 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,763 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,764 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,765 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,765 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,766 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,766 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,767 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,767 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,767 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,767 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,768 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,768 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,768 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,769 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,769 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,769 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,769 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,770 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,770 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,770 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,770 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,771 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,771 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,771 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,772 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,772 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,773 main.EB_Python INFO Found file lockfile-0.9.1.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/lockfile-0.9.1.tar.gz | |
== 2013-12-11 22:09:18,773 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,773 main.EB_Python DEBUG No patches found for extension lockfile. | |
== 2013-12-11 22:09:18,774 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,783 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,784 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,785 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,785 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,786 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,786 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,787 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,787 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,787 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,788 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,788 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,788 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,789 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,789 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,789 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,789 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,790 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,790 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,790 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,791 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,791 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,791 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,791 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,792 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,792 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,792 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,793 main.EB_Python INFO Found file Cython-0.19.1.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/Cython-0.19.1.tar.gz | |
== 2013-12-11 22:09:18,793 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,793 main.EB_Python DEBUG No patches found for extension Cython. | |
== 2013-12-11 22:09:18,794 main.filetools DEBUG run_cmd: running cmd which eb (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,803 main.filetools DEBUG cmd "which eb" exited with exitcode 0 and output: | |
/import/bc2/soft/centos6/software/EasyBuild/1.9.0/bin/eb | |
== 2013-12-11 22:09:18,804 main.filetools DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2013-12-11 22:09:18,805 main.easyconfig.tools DEBUG Also considering installation prefix /import/bc2/soft/centos6/software/EasyBuild/1.9.0... | |
== 2013-12-11 22:09:18,805 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,806 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,806 main.easyconfig.tools DEBUG Added /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.9.0.0-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2013-12-11 22:09:18,807 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_easyblocks-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,807 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild_framework-1.9.0-py2.6.egg/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,807 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,807 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,808 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,808 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,808 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,809 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,809 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,809 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,809 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,810 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,810 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gtk-2.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,810 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,810 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,811 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/custom_easyblocks_BC2/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,811 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
== 2013-12-11 22:09:18,811 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,812 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,812 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /import/bc2/soft/centos6/software/EasyBuild/1.9.0/easybuild/easyconfigs | |
== 2013-12-11 22:09:18,813 main.EB_Python INFO Found file biopython-1.62.tar.gz at /import/bc2/soft/centos6/source/p/Python/extensions/biopython-1.62.tar.gz | |
== 2013-12-11 22:09:18,813 main.EB_Python INFO Fetched extension patches: [] | |
== 2013-12-11 22:09:18,813 main.EB_Python DEBUG No patches found for extension biopython. | |
== 2013-12-11 22:09:18,813 main.filetools DEBUG run_cmd: running cmd python -c "import setuptools" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,879 main.filetools DEBUG cmd "python -c "import setuptools"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:18,880 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:18,880 main.EB_Python INFO Skipping setuptools | |
== 2013-12-11 22:09:18,881 main.filetools DEBUG run_cmd: running cmd python -c "import nose" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:18,976 main.filetools DEBUG cmd "python -c "import nose"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:18,977 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:18,978 main.EB_Python INFO Skipping nose | |
== 2013-12-11 22:09:18,979 main.filetools DEBUG run_cmd: running cmd python -c "import numpy" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,372 main.filetools DEBUG cmd "python -c "import numpy"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,372 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,373 main.EB_Python INFO Skipping numpy | |
== 2013-12-11 22:09:19,373 main.filetools DEBUG run_cmd: running cmd python -c "import scipy" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,713 main.filetools DEBUG cmd "python -c "import scipy"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,713 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,714 main.EB_Python INFO Skipping scipy | |
== 2013-12-11 22:09:19,714 main.filetools DEBUG run_cmd: running cmd python -c "import mpi4py" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,737 main.filetools DEBUG cmd "python -c "import mpi4py"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,738 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,739 main.EB_Python INFO Skipping mpi4py | |
== 2013-12-11 22:09:19,739 main.filetools DEBUG run_cmd: running cmd python -c "import paycheck" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,773 main.filetools DEBUG cmd "python -c "import paycheck"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,774 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,775 main.EB_Python INFO Skipping paycheck | |
== 2013-12-11 22:09:19,775 main.filetools DEBUG run_cmd: running cmd python -c "import argparse" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,812 main.filetools DEBUG cmd "python -c "import argparse"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,813 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,813 main.EB_Python INFO Skipping argparse | |
== 2013-12-11 22:09:19,814 main.filetools DEBUG run_cmd: running cmd python -c "import lockfile" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,860 main.filetools DEBUG cmd "python -c "import lockfile"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,860 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,861 main.EB_Python INFO Skipping lockfile | |
== 2013-12-11 22:09:19,861 main.filetools DEBUG run_cmd: running cmd python -c "import Cython" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,887 main.filetools DEBUG cmd "python -c "import Cython"" exited with exitcode 0 and output: | |
== 2013-12-11 22:09:19,888 main.EB_Python INFO exts_filter result 0 | |
== 2013-12-11 22:09:19,889 main.EB_Python INFO Skipping Cython | |
== 2013-12-11 22:09:19,889 main.filetools DEBUG run_cmd: running cmd python -c "import biopython" (in /tmp/easybuild/Python/2.7.5/goolf-1.4.10) | |
== 2013-12-11 22:09:19,915 main.EB_Python INFO exts_filter result Traceback (most recent call last): | |
File "<string>", line 1, in <module> | |
ImportError: No module named biopython | |
1 | |
== 2013-12-11 22:09:19,916 main.EB_Python INFO Not skipping biopython | |
== 2013-12-11 22:09:19,916 main.EB_Python DEBUG exit code: 1, stdout/err: Traceback (most recent call last): | |
File "<string>", line 1, in <module> | |
ImportError: No module named biopython | |
== 2013-12-11 22:09:19,917 main.EB_Python DEBUG Installing extensions | |
== 2013-12-11 22:09:19,917 main.EB_Python DEBUG Starting extension biopython | |
== 2013-12-11 22:09:19,924 main.EB_Python WARNING Deprecated functionality, will no longer work in v2.0: Determine module path based on software name | |
== 2013-12-11 22:09:19,926 main.EB_Python DEBUG Failed to use class EB_biopython from easybuild.easyblocks.biopython for extension biopython: No module named biopython | |
== 2013-12-11 22:09:19,926 main.EB_Python DEBUG Obtained class <class 'easybuild.easyblocks.generic.pythonpackage.PythonPackage'> for installing extension biopython | |
== 2013-12-11 22:09:19,930 main.EasyConfig INFO Obtained list of valid module classes: ['base', 'bio', 'chem', 'compiler', 'lib', 'phys', 'tools', 'cae', 'data', 'debugger', 'devel', 'ide', 'math', 'mpi', 'numlib', 'perf', 'system', 'vis', 'geo', 'lang', 'toolchain'] | |
== 2013-12-11 22:09:19,930 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:09:19,931 main.EasyConfig DEBUG List of valid stops obtained: ['fetch', 'ready', 'source', 'patch', 'prepare', 'configure', 'build', 'test', 'install', 'extensions', 'package', 'postproc', 'sanitycheck', 'cleanup', 'module', 'testcases'] | |
== 2013-12-11 22:09:19,932 main.EasyConfigParser DEBUG Process filename /import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb with get function (<function read_file at 0x1c0dde8>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb',)), set function (<function write_file at 0x1c0de60>, ('/import/bc2/soft/centos6/installed_eb_files/Python/2.7.5-goolf-1.4.10.eb', None)) | |
== 2013-12-11 22:09:19,932 main.EasyConfigParser DEBUG No version found, using default 1.0 | |
== 2013-12-11 22:09:19,934 main.FormatOneZero DEBUG No section found. | |
== 2013-12-11 22:09:19,935 main.FormatOneZero DEBUG Found header # Built with 1.9.0 on 2013-11-29_00-48-54 | |
== 2013-12-11 22:09:19,935 main.easyconfig.format.pyheaderconfigobj WARNING Deprecated functionality, will no longer work in v2.0: Magic 'global' easyconfigs variables like shared_lib_ext should no longer be used | |
== 2013-12-11 22:09:19,935 main.FormatOneZero DEBUG pyheader initial global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:09:19,936 main.FormatOneZero DEBUG pyheader initial local_vars {} | |
== 2013-12-11 22:09:19,936 main.FormatOneZero DEBUG pyheader text being exec'ed: name = 'Python' | |
version = '2.7.5' | |
homepage = 'http://python.org/' | |
description = "Python is a programming language that lets you work more quickly and integrate your systems more effectively." | |
toolchain = {'name': 'goolf', 'version': '1.4.10'} | |
toolchainopts = {'pic': True, 'opt': True, 'optarch': True} | |
numpyversion = '1.7.0' | |
scipyversion = '0.12.0' | |
source_urls = ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
sources = ['%(name)s-%(version)s.tgz'] | |
patches = ['python-%(version)s_libffi_int128_icc.patch'] | |
# python needs bzip2 to build the bz2 package | |
dependencies = [ | |
('bzip2', '1.0.6'), | |
('zlib', '1.2.8'), | |
('libreadline', '6.2'), | |
('ncurses', '5.9'), | |
] | |
#sanity_check_paths = { | |
# 'files': [], | |
# 'dirs': ['Bio'], | |
#} | |
# order is important! | |
exts_list = [ | |
('setuptools', '0.6c11', { | |
'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/'], | |
}), | |
('nose', '1.3.0', { | |
'source_urls': ['http://pypi.python.org/packages/source/n/nose/'], | |
}), | |
('numpy', numpyversion, { | |
'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/%s' % numpyversion, 'download')], | |
'patches': [ | |
'numpy-%s_distutils_multiple-lib-dirs.patch' % numpyversion, | |
'numpy-iqacml.patch', | |
], | |
}), | |
('scipy', scipyversion, { | |
'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/%s' % scipyversion, 'download')], | |
}), | |
('mpi4py', '1.3', { | |
'source_urls': ['https://mpi4py.googlecode.com/files/'], | |
}), | |
('paycheck', '1.0.2', { | |
'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/'], | |
}), | |
('argparse', '1.2.1', { | |
'source_urls': ['http://argparse.googlecode.com/files/'], | |
}), | |
('lockfile', '0.9.1', { | |
'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/'], | |
}), | |
('Cython', '0.19.1', { | |
'source_urls': ['http://www.cython.org/release/'], | |
}), | |
('biopython', '1.62', { | |
'source_urls': ['http://biopython.org/DIST'], | |
'options': {'modulename': 'Bio'}, | |
}), | |
] | |
moduleclass = 'lang' | |
# Build statistics | |
buildstats = [{ | |
'easybuild-framework_version': '1.9.0', | |
'easybuild-easyblocks_version': '1.9.0', | |
'host': 'login11', | |
'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', | |
'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', | |
'core_count': 16, | |
'timestamp': 1385682534, | |
'build_time': 845.39, | |
'install_size': 209456294, | |
}] | |
== 2013-12-11 22:09:19,937 main.FormatOneZero DEBUG pyheader final global_vars {'OS_NAME': 'centos', 'VeryRestrictive': <easybuild.framework.easyconfig.licenses.VeryRestrictive object at 0x1d34810>, 'GPLv2': <easybuild.framework.easyconfig.licenses.License_GPLv2 object at 0x1d34910>, 'GPLv3': <easybuild.framework.easyconfig.licenses.License_GPLv3 object at 0x1d348d0>, 'SOURCE_TAR_XZ': '%(name)s-%(version)s.tar.xz', 'SOURCELOWER_GTGZ': '%(namelower)s-%(version)s.gtgz', 'SOURCE_TAR_GZ': '%(name)s-%(version)s.tar.gz', 'SOURCE_TAR': '%(name)s-%(version)s.tar', 'SOURCELOWER_TBZ2': '%(namelower)s-%(version)s.tbz2', 'SOURCELOWER_ZIP': '%(namelower)s-%(version)s.zip', 'shared_lib_ext': 'so', 'SOURCELOWER_TAR_BZ2': '%(namelower)s-%(version)s.tar.bz2', 'SOURCE_TBZ2': '%(name)s-%(version)s.tbz2', 'SOURCE_ZIP': '%(name)s-%(version)s.zip', 'SOURCE_XZ': '%(name)s-%(version)s.xz', 'SOURCELOWER_TAR_GZ': '%(namelower)s-%(version)s.tar.gz', 'FTPGNOME_SOURCE': 'http://ftp.gnome.org/pub/GNOME/sources/%(namelower)s/%(version_major_minor)s', 'BITBUCKET_SOURCE': 'http://bitbucket.org/%(namelower)s/%(namelower)s/get', 'SOURCELOWER_XZ': '%(namelower)s-%(version)s.xz', 'SYS_PYTHON_VERSION': '2.6.6', 'SOURCE_TB2': '%(name)s-%(version)s.tb2', 'SOURCE_TAR_BZ2': '%(name)s-%(version)s.tar.bz2', 'R_SOURCE': 'http://cran.r-project.org/src/base/R-%(version_major)s', 'APACHE_SOURCE': 'http://archive.apache.org/dist/%(namelower)s', 'GNU_SOURCE': 'http://ftpmirror.gnu.org/%(name)s', '__builtins__': {'bytearray': <type 'bytearray'>, 'IndexError': <type 'exceptions.IndexError'>, 'all': <built-in function all>, 'help': Type help() for interactive help, or help(object) for help about object., 'vars': <built-in function vars>, 'SyntaxError': <type 'exceptions.SyntaxError'>, 'unicode': <type 'unicode'>, 'UnicodeDecodeError': <type 'exceptions.UnicodeDecodeError'>, 'isinstance': <built-in function isinstance>, 'copyright': Copyright (c) 2001-2010 Python Software Foundation. | |
All Rights Reserved. | |
Copyright (c) 2000 BeOpen.com. | |
All Rights Reserved. | |
Copyright (c) 1995-2001 Corporation for National Research Initiatives. | |
All Rights Reserved. | |
Copyright (c) 1991-1995 Stichting Mathematisch Centrum, Amsterdam. | |
All Rights Reserved., 'NameError': <type 'exceptions.NameError'>, 'BytesWarning': <type 'exceptions.BytesWarning'>, 'dict': <type 'dict'>, 'input': <built-in function input>, 'oct': <built-in function oct>, 'bin': <built-in function bin>, 'SystemExit': <type 'exceptions.SystemExit'>, 'StandardError': <type 'exceptions.StandardError'>, 'format': <built-in function format>, 'repr': <built-in function repr>, 'sorted': <built-in function sorted>, 'False': False, 'RuntimeWarning': <type 'exceptions.RuntimeWarning'>, 'list': <type 'list'>, 'iter': <built-in function iter>, 'reload': <built-in function reload>, 'Warning': <type 'exceptions.Warning'>, '__package__': None, 'round': <built-in function round>, 'dir': <built-in function dir>, 'cmp': <built-in function cmp>, 'set': <type 'set'>, 'bytes': <type 'str'>, 'reduce': <built-in function reduce>, 'intern': <built-in function intern>, 'issubclass': <built-in function issubclass>, 'Ellipsis': Ellipsis, 'EOFError': <type 'exceptions.EOFError'>, 'locals': <built-in function locals>, 'BufferError': <type 'exceptions.BufferError'>, 'slice': <type 'slice'>, 'FloatingPointError': <type 'exceptions.FloatingPointError'>, 'sum': <built-in function sum>, 'getattr': <built-in function getattr>, 'abs': <built-in function abs>, 'exit': Use exit() or Ctrl-D (i.e. EOF) to exit, 'print': <built-in function print>, 'True': True, 'FutureWarning': <type 'exceptions.FutureWarning'>, 'ImportWarning': <type 'exceptions.ImportWarning'>, 'None': None, 'hash': <built-in function hash>, 'ReferenceError': <type 'exceptions.ReferenceError'>, 'len': <built-in function len>, 'credits': Thanks to CWI, CNRI, BeOpen.com, Zope Corporation and a cast of thousands | |
for supporting Python development. See www.python.org for more information., 'frozenset': <type 'frozenset'>, '__name__': '__builtin__', 'ord': <built-in function ord>, 'super': <type 'super'>, 'TypeError': <type 'exceptions.TypeError'>, 'license': See http://www.python.org/2.6/license.html, 'KeyboardInterrupt': <type 'exceptions.KeyboardInterrupt'>, 'UserWarning': <type 'exceptions.UserWarning'>, 'filter': <built-in function filter>, 'range': <built-in function range>, 'staticmethod': <type 'staticmethod'>, 'SystemError': <type 'exceptions.SystemError'>, 'BaseException': <type 'exceptions.BaseException'>, 'pow': <built-in function pow>, 'RuntimeError': <type 'exceptions.RuntimeError'>, 'float': <type 'float'>, 'MemoryError': <type 'exceptions.MemoryError'>, 'StopIteration': <type 'exceptions.StopIteration'>, 'globals': <built-in function globals>, 'divmod': <built-in function divmod>, 'enumerate': <type 'enumerate'>, 'apply': <built-in function apply>, 'LookupError': <type 'exceptions.LookupError'>, 'open': <built-in function open>, 'quit': Use quit() or Ctrl-D (i.e. EOF) to exit, 'basestring': <type 'basestring'>, 'UnicodeError': <type 'exceptions.UnicodeError'>, 'zip': <built-in function zip>, 'hex': <built-in function hex>, 'long': <type 'long'>, 'next': <built-in function next>, 'ImportError': <type 'exceptions.ImportError'>, 'chr': <built-in function chr>, 'xrange': <type 'xrange'>, 'type': <type 'type'>, '__doc__': "Built-in functions, exceptions, and other objects.\n\nNoteworthy: None is the `nil' object; Ellipsis represents `...' in slices.", 'Exception': <type 'exceptions.Exception'>, 'tuple': <type 'tuple'>, 'UnicodeTranslateError': <type 'exceptions.UnicodeTranslateError'>, 'reversed': <type 'reversed'>, 'UnicodeEncodeError': <type 'exceptions.UnicodeEncodeError'>, 'IOError': <type 'exceptions.IOError'>, 'hasattr': <built-in function hasattr>, 'delattr': <built-in function delattr>, 'setattr': <built-in function setattr>, 'raw_input': <built-in function raw_input>, 'SyntaxWarning': <type 'exceptions.SyntaxWarning'>, 'compile': <built-in function compile>, 'ArithmeticError': <type 'exceptions.ArithmeticError'>, 'str': <type 'str'>, 'property': <type 'property'>, 'GeneratorExit': <type 'exceptions.GeneratorExit'>, 'int': <type 'int'>, '__import__': <built-in function __import__>, 'KeyError': <type 'exceptions.KeyError'>, 'coerce': <built-in function coerce>, 'PendingDeprecationWarning': <type 'exceptions.PendingDeprecationWarning'>, 'file': <type 'file'>, 'EnvironmentError': <type 'exceptions.EnvironmentError'>, 'unichr': <built-in function unichr>, 'id': <built-in function id>, 'OSError': <type 'exceptions.OSError'>, 'DeprecationWarning': <type 'exceptions.DeprecationWarning'>, 'min': <built-in function min>, 'UnicodeWarning': <type 'exceptions.UnicodeWarning'>, 'execfile': <built-in function execfile>, 'any': <built-in function any>, 'complex': <type 'complex'>, 'bool': <type 'bool'>, 'ValueError': <type 'exceptions.ValueError'>, 'NotImplemented': NotImplemented, 'map': <built-in function map>, 'buffer': <type 'buffer'>, 'max': <built-in function max>, 'object': <type 'object'>, 'TabError': <type 'exceptions.TabError'>, 'callable': <built-in function callable>, 'ZeroDivisionError': <type 'exceptions.ZeroDivisionError'>, 'eval': <built-in function eval>, '__debug__': True, 'IndentationError': <type 'exceptions.IndentationError'>, 'AssertionError': <type 'exceptions.AssertionError'>, 'classmethod': <type 'classmethod'>, 'UnboundLocalError': <type 'exceptions.UnboundLocalError'>, 'NotImplementedError': <type 'exceptions.NotImplementedError'>, 'AttributeError': <type 'exceptions.AttributeError'>, 'OverflowError': <type 'exceptions.OverflowError'>}, 'SOURCELOWER_TAR': '%(namelower)s-%(version)s.tar', 'SOURCE_GTGZ': '%(name)s-%(version)s.gtgz', 'OS_VERSION': '6.5', 'GOOGLECODE_SOURCE': 'http://%(namelower)s.googlecode.com/files', 'SOURCEFORGE_SOURCE': 'http://download.sourceforge.net/%(namelower)s', 'SOURCELOWER_TB2': '%(namelower)s-%(version)s.tb2', 'CRAN_SOURCE': 'http://cran.r-project.org/src/contrib', 'SOURCE_TGZ': '%(name)s-%(version)s.tgz', 'SOURCELOWER_TXZ': '%(namelower)s-%(version)s.txz', 'SHLIB_EXT': 'so', 'SOURCELOWER_TAR_XZ': '%(namelower)s-%(version)s.tar.xz', 'SOURCE_TXZ': '%(name)s-%(version)s.txz', 'LAUNCHPAD_SOURCE': 'https://launchpad.net/%(namelower)s/%(version_major_minor)s.x/%(version)s/+download/', 'SOURCELOWER_TGZ': '%(namelower)s-%(version)s.tgz', 'OS_TYPE': 'Linux'} | |
== 2013-12-11 22:09:19,937 main.FormatOneZero DEBUG pyheader final local_vars {'buildstats': [{'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'build_time': 845.38999999999999, 'timestamp': 1385682534, 'core_count': 16, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'easybuild-easyblocks_version': '1.9.0', 'easybuild-framework_version': '1.9.0'}], 'toolchain': {'version': '1.4.10', 'name': 'goolf'}, 'name': 'Python', 'scipyversion': '0.12.0', 'exts_list': [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'moduleclass': 'lang', 'sources': ['%(name)s-%(version)s.tgz'], 'version': '2.7.5', 'dependencies': [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'source_urls': ['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'toolchainopts': {'opt': True, 'optarch': True, 'pic': True}, 'numpyversion': '1.7.0', 'homepage': 'http://python.org/', 'patches': ['python-%(version)s_libffi_int128_icc.patch'], 'description': 'Python is a programming language that lets you work more quickly and integrate your systems more effectively.'} | |
== 2013-12-11 22:09:19,937 main.FormatOneZero DEBUG No docstring found in local_vars | |
== 2013-12-11 22:09:19,938 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: _legacy_license does not have to be checked | |
== 2013-12-11 22:09:19,939 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:19,940 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:09:19,940 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:09:19,940 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:19,941 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:19,941 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [[], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': [None, 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': [None, 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': [None, 'A short description of the software', (0, 'mandatory')], 'exts_list': [[], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['base', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [[], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [None, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': [None, 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:19,943 main.easyconfig.templates DEBUG name: name, config: None | |
== 2013-12-11 22:09:19,943 main.easyconfig.templates DEBUG name: version, config: None | |
== 2013-12-11 22:09:19,943 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:19,943 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:19,943 main.EasyConfig INFO setting config option buildstats: value [{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}] | |
== 2013-12-11 22:09:19,944 main.EasyConfig INFO setting config option toolchain: value {'version': '1.4.10', 'name': 'goolf'} | |
== 2013-12-11 22:09:19,944 main.EasyConfig INFO setting config option name: value Python | |
== 2013-12-11 22:09:19,944 main.EasyConfig DEBUG Ignoring unknown config option scipyversion (value: 0.12.0) | |
== 2013-12-11 22:09:19,945 main.EasyConfig INFO setting config option exts_list: value [('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})] | |
== 2013-12-11 22:09:19,945 main.EasyConfig INFO setting config option moduleclass: value lang | |
== 2013-12-11 22:09:19,945 main.easyconfig.easyconfig WARNING Unable to resolve template value %(name)s-%(version)s.tgz with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:09:19,945 main.EasyConfig INFO setting config option sources: value ['%(name)s-%(version)s.tgz'] | |
== 2013-12-11 22:09:19,946 main.EasyConfig INFO setting config option version: value 2.7.5 | |
== 2013-12-11 22:09:19,946 main.EasyConfig INFO setting config option dependencies: value [('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')] | |
== 2013-12-11 22:09:19,946 main.easyconfig.easyconfig WARNING Unable to resolve template value http://www.python.org/ftp/%(namelower)s/%(version)s/ with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:09:19,946 main.EasyConfig INFO setting config option source_urls: value ['http://www.python.org/ftp/%(namelower)s/%(version)s/'] | |
== 2013-12-11 22:09:19,946 main.EasyConfig INFO setting config option toolchainopts: value {'opt': True, 'optarch': True, 'pic': True} | |
== 2013-12-11 22:09:19,947 main.EasyConfig DEBUG Ignoring unknown config option numpyversion (value: 1.7.0) | |
== 2013-12-11 22:09:19,947 main.EasyConfig INFO setting config option homepage: value http://python.org/ | |
== 2013-12-11 22:09:19,947 main.easyconfig.easyconfig WARNING Unable to resolve template value python-%(version)s_libffi_int128_icc.patch with dict {'versionsuffix': '', 'versionprefix': ''} | |
== 2013-12-11 22:09:19,947 main.EasyConfig INFO setting config option patches: value ['python-%(version)s_libffi_int128_icc.patch'] | |
== 2013-12-11 22:09:19,948 main.EasyConfig INFO setting config option description: value Python is a programming language that lets you work more quickly and integrate your systems more effectively. | |
== 2013-12-11 22:09:19,948 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:19,950 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,950 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,950 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,951 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:09:19,951 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:09:19,951 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:19,951 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:19,952 main.easyconfig.templates DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'makeopts': ['', 'Extra options passed to make (default already has -j X)', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tgz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': [None, 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'patches': [['python-%(version)s_libffi_int128_icc.patch'], 'List of patches to apply', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['2.7.5', 'Version of software', (0, 'mandatory')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'buildstats': [[{'timestamp': 1385682534, 'cpu_model': 'Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz', 'build_time': 845.38999999999999, 'easybuild-framework_version': '1.9.0', 'platform': 'Linux-2.6.32-358.18.1.el6.x86_64-x86_64-with-centos-6.4-Final', 'host': 'login11', 'install_size': 209456294, 'easybuild-easyblocks_version': '1.9.0', 'core_count': 16}], 'A list of dicts with build statistics', (9, 'other')], 'homepage': ['http://python.org/', 'The homepage of the software', (0, 'mandatory')], 'premakeopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'description': ['Python is a programming language that lets you work more quickly and integrate your systems more effectively.', 'A short description of the software', (0, 'mandatory')], 'exts_list': [[('setuptools', '0.6c11', {'source_urls': ['http://pypi.python.org/packages/source/s/setuptools/']}), ('nose', '1.3.0', {'source_urls': ['http://pypi.python.org/packages/source/n/nose/']}), ('numpy', '1.7.0', {'patches': ['numpy-1.7.0_distutils_multiple-lib-dirs.patch', 'numpy-iqacml.patch'], 'source_urls': [('http://sourceforge.net/projects/numpy/files/NumPy/1.7.0', 'download')]}), ('scipy', '0.12.0', {'source_urls': [('http://sourceforge.net/projects/scipy/files/scipy/0.12.0', 'download')]}), ('mpi4py', '1.3', {'source_urls': ['https://mpi4py.googlecode.com/files/']}), ('paycheck', '1.0.2', {'source_urls': ['http://pypi.python.org/packages/source/p/paycheck/']}), ('argparse', '1.2.1', {'source_urls': ['http://argparse.googlecode.com/files/']}), ('lockfile', '0.9.1', {'source_urls': ['https://pypi.python.org/packages/source/l/lockfile/']}), ('Cython', '0.19.1', {'source_urls': ['http://www.cython.org/release/']}), ('biopython', '1.62', {'options': {'modulename': 'Bio'}, 'source_urls': ['http://biopython.org/DIST']})], 'List with extensions added to the base installation', (7, 'extensions')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'source_urls': [['http://www.python.org/ftp/%(namelower)s/%(version)s/'], 'List of URLs for source files', (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[('bzip2', '1.0.6'), ('zlib', '1.2.8'), ('libreadline', '6.2'), ('ncurses', '5.9')], 'List of dependencies', (5, 'dependencies')], 'key': [None, 'Key for installing software', (6, 'license')], 'toolchain': [{'version': '1.4.10', 'name': 'goolf'}, 'Name and version of toolchain', (0, 'mandatory')], 'parallel': [None, 'Degree of parallelism for e.g. make (default: based on the number of cores and restrictions in ulimit)', (3, 'build')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['Python', 'Name of software', (0, 'mandatory')], 'license': [None, 'Software license', (0, 'mandatory')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'preconfigopts': ['', 'Extra options pre-passed to configure.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'toolchainopts': [{'opt': True, 'optarch': True, 'pic': True}, 'Extra options for compilers', (2, 'toolchain')], 'configopts': ['', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')]} | |
== 2013-12-11 22:09:19,954 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,954 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,954 main.easyconfig.templates DEBUG version found in easyconfig is 2.7.5 | |
== 2013-12-11 22:09:19,954 main.easyconfig.templates DEBUG name: name, config: Python | |
== 2013-12-11 22:09:19,954 main.easyconfig.templates DEBUG name: version, config: 2.7.5 | |
== 2013-12-11 22:09:19,955 main.easyconfig.templates DEBUG name: versionsuffix, config: | |
== 2013-12-11 22:09:19,955 main.easyconfig.templates DEBUG name: versionprefix, config: | |
== 2013-12-11 22:09:19,955 main.EasyConfig INFO Validating easy block | |
== 2013-12-11 22:09:19,955 main.EasyConfig INFO Checking OS dependencies | |
== 2013-12-11 22:09:19,956 main.EasyConfig INFO OS dependencies ok: [] | |
== 2013-12-11 22:09:19,956 main.EasyConfig INFO Checking skipsteps | |
== 2013-12-11 22:09:19,956 main.EasyConfig INFO Checking build option lists | |
== 2013-12-11 22:09:19,956 main.EasyConfig INFO Checking licenses | |
== 2013-12-11 22:09:19,957 main.EasyConfig WARNING Deprecated functionality, will no longer work in v2.0: Mandatory license not enforced | |
== 2013-12-11 22:09:19,959 main.search_toolchain.search_toolchain DEBUG Skipping importing of toolchain modules, processing of toolchain constants is already done. | |
== 2013-12-11 22:09:19,962 main.ToolchainOptions DEBUG _add_options: adding options {'usempi': (False, 'Use MPI compiler as default compiler')} | |
== 2013-12-11 22:09:19,962 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICXX defined, but allowed | |
== 2013-12-11 22:09:19,962 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF90 defined, but allowed | |
== 2013-12-11 22:09:19,962 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICF77 defined, but allowed | |
== 2013-12-11 22:09:19,962 main.ToolchainOptions DEBUG _add_options_map: no option with name _opt_MPICC defined, but allowed | |
== 2013-12-11 22:09:19,963 main.Goolf DEBUG _set_mpi_options: all current options {'usempi': False} | |
== 2013-12-11 22:09:19,964 main.Lmod DEBUG self.mod_paths set based on $MODULEPATH: ['/scratch/tmpQspQG8/all', '/import/bc2/soft/centos6/modules/all', '/import/bc2/soft/centos6/modules/base', '/import/bc2/soft/centos6/modules/bio', '/import/bc2/soft/centos6/modules/chem', '/import/bc2/soft/centos6/modules/compiler', '/import/bc2/soft/centos6/modules/data', '/import/bc2/soft/centos6/modules/devel', '/import/bc2/soft/centos6/modules/lang', '/import/bc2/soft/centos6/modules/lib', '/import/bc2/soft/centos6/modules/math', '/import/bc2/soft/centos6/modules/mpi', '/import/bc2/soft/centos6/modules/numlib', '/import/bc2/soft/centos6/modules/system', '/import/bc2/soft/centos6/modules/toolchain', '/import/bc2/soft/centos6/modules/tools', '/import/bc2/soft/centos6/modules/vis', '/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core', '/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core'] | |
== 2013-12-11 22:09:19,964 main.Lmod INFO Prepended list of module paths with path used by EasyBuild: /import/bc2/soft/centos6/modules/all | |
== 2013-12-11 22:09:19,964 main.Lmod INFO $MODULEPATH set based on list of module paths: /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:19,965 main.filetools INFO Command lmod found at /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod | |
== 2013-12-11 22:09:19,965 main.Lmod INFO Full path for module command is /import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod, so using it | |
== 2013-12-11 22:09:19,965 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:19,965 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:19,966 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python update' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,130 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,210 main.Lmod INFO Found Lmod version 5.2 | |
== 2013-12-11 22:09:20,211 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,212 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,213 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,334 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,336 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,336 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,337 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,434 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,435 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,436 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,436 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/vis' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,559 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,561 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,561 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,562 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/tools' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,684 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,685 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,686 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,686 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/toolchain' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,806 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,807 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,807 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,807 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/system' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:20,932 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:20,933 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:20,934 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:20,935 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/numlib' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,056 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,057 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,057 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,058 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/mpi' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,175 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,176 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,177 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,177 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/math' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,296 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,297 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,297 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,297 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lib' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,417 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,417 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,417 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,417 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/lang' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,535 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,536 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,537 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,537 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/devel' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,656 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,657 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,657 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,658 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/data' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,777 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,777 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,778 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,778 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/compiler' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:21,896 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:21,897 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:21,897 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:21,898 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/chem' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:22,016 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:22,017 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:22,017 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:22,017 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/bio' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:22,135 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:22,136 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:22,136 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:22,137 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/base' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:22,257 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:22,258 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:22,258 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:22,258 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /scratch/tmpQspQG8/all' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:22,376 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:22,377 main.Lmod DEBUG Current MODULEPATH: /scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/modules/all:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:22,377 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:22,378 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python use /import/bc2/soft/centos6/modules/all' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:22,497 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:25,217 main.Lmod DEBUG Updating Lmod spider cache /import/bc2/home/admin/pub/.lmod.d/.cache/moduleT.lua with output from 'spider -o moduleT /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core' | |
== 2013-12-11 22:09:25,889 main.ToolchainOptions DEBUG _add_options: adding options {'precise': (False, 'High precision'), 'verbose': (False, 'Verbose output'), 'pic': (False, 'Use PIC'), 'static': (False, 'Build static library'), 'optarch': (True, 'Enable architecture optimizations'), 'veryloose': (False, 'Very loose precision'), 'strict': (False, 'Strict (highest) precision'), 'unroll': (False, 'Unroll loops'), 'lowopt': (False, 'Low compiler optimizations'), 'shared': (False, 'Build shared library'), 'opt': (False, 'High compiler optimizations'), 'i8': (False, 'Integers are 8 byte integers'), 'loose': (False, 'Loose precision'), 'cstd': (None, 'Specify C standard'), 'defaultprec': (False, 'Default precision'), 'openmp': (False, 'Enable OpenMP'), 'noopt': (False, 'Disable compiler optimizations'), 'packed-linker-options': (False, 'Pack the linker options as comma separated list'), 'r8': (False, 'Real is 8 byte real'), 'cciscxx': (False, 'Use CC as CXX'), '32bit': (False, 'Compile 32bit target'), 'debug': (False, 'Enable debug'), 'defaultopt': (False, 'Default compiler optimizations')} | |
== 2013-12-11 22:09:25,890 main.ToolchainOptions DEBUG _add_options: adding options {'f2c': (False, 'Generate code compatible with f2c and f77'), 'lto': (False, 'Enable Link Time Optimization'), 'loop': (False, 'Automatic loop parallellisation')} | |
== 2013-12-11 22:09:25,892 main.Goolf INFO _get_optimal_architecture: using march=native as optarch for Intel. | |
== 2013-12-11 22:09:25,893 main.Goolf DEBUG _compiler_set_options: compiler toolchain options {'precise': False, 'verbose': False, 'pic': False, 'static': False, 'optarch': True, 'usempi': False, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'f2c': False, 'noopt': False, 'packed-linker-options': False, 'lto': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False, 'loop': False} | |
== 2013-12-11 22:09:25,894 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:09:25,894 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:25,897 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:09:25,897 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:09:25,897 main.Goolf DEBUG _toolchain_exists: checking for name goolf version 1.4.10 (module: goolf/1.4.10) | |
== 2013-12-11 22:09:25,898 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:25,898 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:25,898 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python --terse avail goolf/1.4.10' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:28,441 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] | |
== 2013-12-11 22:09:28,443 main.Lmod DEBUG 'module available goolf/1.4.10' gave 1 answers: ['goolf/1.4.10'] | |
== 2013-12-11 22:09:28,443 main.Goolf DEBUG Loading toolchain module and dependencies... | |
== 2013-12-11 22:09:28,444 main.module_generator DEBUG Determining module name for {'dummy': True, 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'goolf', 'versionsuffix': '', 'version': '1.4.10', 'parsed': True} (eb_ns: False) | |
== 2013-12-11 22:09:28,445 main.module_generator DEBUG List of available module naming schemes: ['EasyBuildModuleNamingScheme', 'JustAppNameAndVersion'] | |
== 2013-12-11 22:09:28,448 main.module_generator DEBUG Module name goolf/1.4.10 validated | |
== 2013-12-11 22:09:28,449 main.module_generator DEBUG Obtained module name goolf/1.4.10 | |
== 2013-12-11 22:09:28,449 main.Lmod DEBUG Current MODULEPATH: /import/bc2/soft/centos6/modules/all:/scratch/tmpQspQG8/all:/import/bc2/soft/centos6/modules/base:/import/bc2/soft/centos6/modules/bio:/import/bc2/soft/centos6/modules/chem:/import/bc2/soft/centos6/modules/compiler:/import/bc2/soft/centos6/modules/data:/import/bc2/soft/centos6/modules/devel:/import/bc2/soft/centos6/modules/lang:/import/bc2/soft/centos6/modules/lib:/import/bc2/soft/centos6/modules/math:/import/bc2/soft/centos6/modules/mpi:/import/bc2/soft/centos6/modules/numlib:/import/bc2/soft/centos6/modules/system:/import/bc2/soft/centos6/modules/toolchain:/import/bc2/soft/centos6/modules/tools:/import/bc2/soft/centos6/modules/vis:/import/bc2/soft/centos6/software/lmod/5.2/modulefiles/Core:/import/bc2/soft/centos6/software/lmod/lmod/modulefiles/Core | |
== 2013-12-11 22:09:28,450 main.Lmod DEBUG Adjusted LD_LIBRARY_PATH from '/import/bc2/soft/centos6/software/Python/2.7.5/lib:/import/bc2/soft/centos6/software/ncurses/5.9/lib:/import/bc2/soft/centos6/software/libreadline/6.2/lib:/import/bc2/soft/centos6/software/zlib/1.2.8/lib:/import/bc2/soft/centos6/software/bzip2/1.0.6/lib:/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib:/import/bc2/soft/centos6/software/FFTW/3.3.3/lib:/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib:/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib:/import/bc2/soft/centos6/software/hwloc/1.6.2/lib:/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2:/import/bc2/soft/centos6/software/GCC/4.7.2/lib64:/import/bc2/soft/centos6/software/GCC/4.7.2/lib:/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' to '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib' | |
== 2013-12-11 22:09:28,451 main.Lmod DEBUG Running module command '/import/bc2/soft/centos6/software/lmod/lmod/libexec/lmod python load goolf/1.4.10' from /tmp/easybuild/Python/2.7.5/goolf-1.4.10 | |
== 2013-12-11 22:09:28,639 main.Lmod DEBUG Correcting paths in LD_LIBRARY_PATH from ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/import/bc2/soft/centos6/software/hwloc/1.6.2/lib', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib/gcc/x86_64-unknown-linux-gnu/4.7.2', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib64', '/import/bc2/soft/centos6/software/GCC/4.7.2/lib', '/import/bc2/soft/centos6/software/EasyBuild/1.9.0/lib'] to ['/import/bc2/soft/centos6/software/Python/2.7.5/lib', '/import/bc2/soft/centos6/software/ncurses/5.9/lib', '/import/bc2/soft/centos6/software/libreadline/6.2/lib', '/import/bc2/soft/centos6/software/zlib/1.2.8/lib', '/import/bc2/soft/centos6/software/bzip2/1.0.6/lib', '/import/bc2/soft/centos6/software/ScaLAPACK/2.0.2/lib', '/import/bc2/soft/centos6/software/FFTW/3.3.3/lib', '/import/bc2/soft/centos6/software/OpenBLAS/0.2.6/lib', '/import/bc2/soft/centos6/software/OpenMPI/1.6.4/lib', '/impo |
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