Created
January 8, 2014 19:49
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sickle with versionsuffix
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild | |
# Author: Pablo Escobar Lopez | |
# Swiss Institute of Bioinformatics | |
# Biozentrum - University of Basel | |
easyblock='MakeCp' | |
name = "sickle" | |
# version checked running "sickle --version" | |
version = "1.210" | |
versionsuffix = "" | |
homepage = 'https://github.com/najoshi/sickle' | |
description = """ Windowed Adaptive Trimming for fastq files using quality """ | |
toolchain = {'name': 'goolf', 'version': '1.4.10'} | |
# commit bab15f7d14b06400be37d50df7c092b1ec6fe0c5 | |
git_commit_id = 'bab15f7' | |
# define custom version/commit on runtime using | |
# --try-software-version=1.210 --try-amend=versionsuffix=1234567 | |
if versionsuffix: | |
git_commit_id = versionsuffix | |
sources = ['%s.tar.gz' % git_commit_id] | |
source_urls = ['https://github.com/najoshi/sickle/archive/'] | |
files_to_copy = [(['sickle'], 'bin'), "README.md", "test"] | |
sanity_check_paths = { | |
'files': ['bin/sickle'], | |
'dirs': [] | |
} | |
moduleclass = 'bio' |
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