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@petebankhead
Created December 27, 2016 19:05
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An example ImageJ macro implementing a Difference of Gaussians filter
// Prompt to get sigma values for the Difference of Gaussians filtering
Dialog.create("Choose filter sizes for DoG filtering");
Dialog.addNumber("Gaussian sigma 1", 1);
Dialog.addNumber("Gaussian sigma 2", 2);
Dialog.show();
sigma1 = Dialog.getNumber();
sigma2 = Dialog.getNumber();
// Get the current image
idOrig = getImageID();
// Convert to 32-bit (so we can have negative values)
run("32-bit");
// Duplicate the image, and request the ID of the duplicate
run("Duplicate...", "title=[My duplicated image]");
// Smooth the original & duplicated images
idDuplicate = getImageID();
run("Gaussian Blur...", "sigma="+sigma1);
selectImage(idOrig);
run("Gaussian Blur...", "sigma="+sigma2);
// Subtract one smoothed image from the other
imageCalculator("Subtract create", idDuplicate, idOrig);
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