JSS autowig examples

basic.ipynb

dependent.ipynb

index.ipynb

{
 "cells": [
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "AutoWIG examples\n",
    "================\n",
    "\n",
    "This notebook contains links for all the four examples presented in the accompanying paper.\n",
    "\n",
    "* [Wrapping a basic library](basic.ipynb)\n",
    "* [Wrapping a subset of a very large library](subset.ipynb)\n",
    "* [Wrapping a template library](template.ipynb)\n",
    "* [Wrapping dependent libraries](dependent.ipynb)"
   ]
  }
 ],
 "metadata": {
  "anaconda-cloud": {},
  "kernelspec": {
   "display_name": "Python 2",
   "language": "python",
   "name": "python2"
  },
  "language_info": {
   "codemirror_mode": {
    "name": "ipython",
    "version": 2
   },
   "file_extension": ".py",
   "mimetype": "text/x-python",
   "name": "python",
   "nbconvert_exporter": "python",
   "pygments_lexer": "ipython2",
   "version": "2.7.12"
  }
 },
 "nbformat": 4,
 "nbformat_minor": 1
}

run.bat

echo OFF

echo "AutoWIG Examples"
echo "================"
echo ""
echo "This script will run the four examples presented in the"
echo "accompanying paper. Corresponding Jupyter notebooks can"
echo "also be run individually, echo using, the following"
echo "commands,"
echo ""

echo ON

jupyter nbconvert --to notebook --execute basic.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
jupyter nbconvert --to notebook --execute subset.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
jupyter nbconvert --to notebook --execute template.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
jupyter nbconvert --to notebook --execute dependent.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'

echo OFF

echo "In order to visualize the Jupyter notebooks execute the "
echo "folowing command"
echo ""
echo "jupyter notebook index.ipynb"

run.sh

set +x
set +e

echo "AutoWIG Examples"
echo "================"
echo ""
echo "This script will run the four examples presented in the"
echo "accompanying paper. Corresponding Jupyter notebooks can"
echo "also be run individually, echo using, the following"
echo "commands,"
echo ""

set -x

# git clone http://github.com/StatisKit/AutoWIG.git --depth=1
# mv AutoWIG/doc/examples/basic basic
# rm -rf AutoWIG
# jupyter nbconvert --to notebook --execute basic.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
# git clone http://github.com/StatisKit/PyClangLite.git --depth=1
# jupyter nbconvert --to notebook --execute subset.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
# rm -rf PySTL
# git clone http://github.com/StatisKit/PySTL.git --depth=1
# jupyter nbconvert --to notebook --execute template.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'
git clone http://github.com/pfernique/StructureAnalysis.git
cd StructureAnalysis
git checkout -b remove_tool origin/remove_tool
cd ..
jupyter nbconvert --to notebook --execute dependent.ipynb --allow-errors --inplace --ExecutePreprocessor.timeout=3600 --NotebookApp.kernel_spec_manager_class='environment_kernels.EnvironmentKernelSpecManager'

set -e
set +x

echo "In order to visualize the Jupyter notebooks execute the "
echo "folowing command"
echo ""
echo "jupyter notebook index.ipynb"

subset.ipynb

template.ipynb