Skip to content

Instantly share code, notes, and snippets.

@pgm
pgm / correlation_from_csv.py
Created September 22, 2020 02:30
Script based on code from the DepMap portal code to compute the top N pearson correlations and write to a CSV file
import argparse
import sqlite3
import sys
import numpy as np
import pandas as pd
def main():
parser = argparse.ArgumentParser()
parser.add_argument("in_csv_0")