pgroves

Hello Everyone,

I am doing a small demo project that will hopefully include a gen3 server running from compose-services to pull data stored in a VCF from gen3, do some analysis, and upload the output to a data type that I define in a new dictionary. If all goes well we would go after funding for a more permanent installation later on.

First, here is the current state of the world around the data dictionaries (DD), as far as I can tell:

• compose-services is configured by URL to point to a DD stored in s3 [1]. This does not contain the VCF definition. Is this meant to be kept up to date? It has some SHAs in the '_settings', but I don't know if those identify a git commit, or what repo.
• compose-services can optionally use a DD stored as files in the same directory, and there is one checked into the repo [2]. This version also does not contain VCF and is at least 14 months old.
• The 'main site' [3] shows a DD with a VCF, but is there a URL like [1] that I can configure my instance to pull from? Where are t

pgroves

                                                      NavelGazer                                                                             
   


Synopsis

   navelgazer {-v|-q} {-f  <filename>} {-h} {-gt} {-t|-o} {-b}

Description

pgroves

# NavelGazer 
# This awesome demo prints out the values of it's arguments. Below 
# are the individual options. 

---
###############
## Verbosity ##
###############
## How much info to print during execution 
## + This option may be left unspecified.