Mapreduce Word count example (sort by word frequency)

WordCount1.java

import java.io.FileReader;
import java.io.BufferedReader;                                                   
import java.io.IOException;
import java.net.URI;
import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import java.util.*;
import java.util.StringTokenizer;

import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.IntWritable;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapreduce.Job;
import org.apache.hadoop.mapreduce.Mapper;
import org.apache.hadoop.mapreduce.Reducer;
import org.apache.hadoop.mapreduce.lib.input.FileInputFormat;
import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat;
import org.apache.hadoop.mapreduce.Counter;
import org.apache.hadoop.util.GenericOptionsParser;
import org.apache.hadoop.util.StringUtils;

public class WordCount1 {

  public static class TokenizerMapper
       extends Mapper<Object, Text, Text, IntWritable>{

    static enum CountersEnum { INPUT_WORDS }

    private final static IntWritable one = new IntWritable(1);
    private Text word = new Text();

    private boolean caseSensitive;
    private Set<String> patternsToSkip = new HashSet<String>();

    private Configuration conf;
    private BufferedReader fis;
    

    @Override
    public void setup(Context context) throws IOException,
        InterruptedException {
      conf = context.getConfiguration();
      caseSensitive = conf.getBoolean("wordcount.case.sensitive", true);
      if (conf.getBoolean("wordcount.skip.patterns", false)) {
        URI[] patternsURIs = Job.getInstance(conf).getCacheFiles();
        for (URI patternsURI : patternsURIs) {
          Path patternsPath = new Path(patternsURI.getPath());
          String patternsFileName = patternsPath.getName().toString();
          parseSkipFile(patternsFileName);
        }
      }
    }

    private void parseSkipFile(String fileName) {
      try {
        fis = new BufferedReader(new FileReader(fileName));
        String pattern = null;
        while ((pattern = fis.readLine()) != null) {
          patternsToSkip.add(pattern);
        }
      } catch (IOException ioe) {
        System.err.println("Caught exception while parsing the cached file '"
            + StringUtils.stringifyException(ioe));
      }
    }

    @Override
    public void map(Object key, Text value, Context context
                    ) throws IOException, InterruptedException {
      String line = (caseSensitive) ?
          value.toString() : value.toString().toLowerCase();
      for (String pattern : patternsToSkip) {
        line = line.replaceAll(pattern, "");
      }
      StringTokenizer itr = new StringTokenizer(line);
      while (itr.hasMoreTokens()) {
        String token = itr.nextToken();
        for(int i=0;i<token.length()-2;i++){
            word.set(token.substring(i,i+3));
            context.write(word, one);
        }
          
        Counter counter = context.getCounter(CountersEnum.class.getName(),
            CountersEnum.INPUT_WORDS.toString());
        counter.increment(1);
      }
    }
  }

  public static class IntSumReducer
       extends Reducer<Text,IntWritable,Text,IntWritable> {
    private IntWritable result = new IntWritable();
    private Map<String , Integer > map = new LinkedHashMap<String, Integer>();
    public void reduce(Text key, Iterable<IntWritable> values,
                       Context context
                       ) throws IOException, InterruptedException {
      int sum = 0;
      for (IntWritable val : values) {
        sum += val.get();
      }
      map.put(key.toString(), sum);
      //result.set(sum);
      //context.write(key, result);
    }
    @Override
    public void cleanup(Context context) throws IOException, InterruptedException {
        Map<String, Integer> sortedMap = new HashMap<String, Integer>();
        sortedMap = sortMap(map);
        for (Map.Entry<String,Integer> entry : sortedMap.entrySet()){
            context.write(new Text(entry.getKey()),new IntWritable(entry.getValue()));
        }
    }
    
    public Map<String ,Integer> sortMap(Map<String,Integer> unsortMap){

        Map<String ,Integer> hashmap = new LinkedHashMap<String,Integer>();
        int count=0;
        List<Map.Entry<String,Integer>> list = new LinkedList<Map.Entry<String,Integer>>(unsortMap.entrySet());
        //Sorting the list we created from unsorted Map
        Collections.sort(list , new Comparator<Map.Entry<String,Integer>>(){

        public int compare (Map.Entry<String , Integer> o1 , Map.Entry<String , Integer> o2 ){
            //sorting in descending order
            return o2.getValue().compareTo(o1.getValue());
        }
    });
        for(Map.Entry<String, Integer> entry : list){
            hashmap.put(entry.getKey(),entry.getValue());
            //hashmap.put(entry.getValue(), entry.getKey());
        }
                                                                                 
        return hashmap;
    }
  }
    
  public static void main(String[] args) throws Exception {
    Configuration conf = new Configuration();
    GenericOptionsParser optionParser = new GenericOptionsParser(conf, args);
    String[] remainingArgs = optionParser.getRemainingArgs();
    if ((remainingArgs.length != 2) && (remainingArgs.length != 4)) {
      System.err.println("Usage: wordcount <in> <out> [-skip skipPatternFile]");
      System.exit(2);
    }
    Job job = Job.getInstance(conf, "word count");
    job.setJarByClass(WordCount1.class);
    job.setMapperClass(TokenizerMapper.class);
    job.setCombinerClass(IntSumReducer.class);
    job.setReducerClass(IntSumReducer.class);
    job.setOutputKeyClass(Text.class);
    job.setOutputValueClass(IntWritable.class);
    job.setNumReduceTasks(1);

    List<String> otherArgs = new ArrayList<String>();
    for (int i=0; i < remainingArgs.length; ++i) {
      if ("-skip".equals(remainingArgs[i])) {
        job.addCacheFile(new Path(remainingArgs[++i]).toUri());
        job.getConfiguration().setBoolean("wordcount.skip.patterns", true);
      } else {
        otherArgs.add(remainingArgs[i]);
      }
    }
    FileInputFormat.addInputPath(job, new Path(otherArgs.get(0)));
    FileOutputFormat.setOutputPath(job, new Path(otherArgs.get(1)));

    System.exit(job.waitForCompletion(true) ? 0 : 1);
  }
}