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Created April 2, 2012 11:48
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Calling into R (Rlib.so/Rlib.dylib) from the D programming language
/**
A minimal example to use the random number generator of R (calling into Rlib.so from D)
dmd test_rlib.d ; ./test_rlib
It is a copy of the C code I wrote for BioLib
Pjotr Prins, 2012
See the latest version at
https://github.com/pjotrp/qtlHD/blob/master/src/D/test/rlib/test_rlib.d
*/
module test.rlib.test_rlib;
import std.algorithm;
import std.range;
import std.c.stdio;
import std.stdio;
import std.string;
import std.conv;
import std.c.stdlib;
pragma(lib, "R");
extern (C) void Rf_initEmbeddedR(size_t argc, char **argv);
extern (C) void Rf_endEmbeddedR(size_t);
extern (C) void R_SaveGlobalEnv();
extern(C){
double norm_rand();
double unif_rand();
double exp_rand();
void GetRNGstate();
void PutRNGstate();
}
/**
* Initialize the R interpreter
*/
void R_Init() {
version(darwin) { // OSX
string args[] = [ "BiolibEmbeddedR", "--gui=none", "--silent", "--no-environ", "--no-site-file", "--no-init-file"];
} else {
string args[] = [ "BiolibEmbeddedR", "--gui=none", "--silent", "--no-environ"];
}
char *argv[];
argv.length = args.length;
foreach (i, s ; args) {
argv[i] = cast(char *)toStringz(args[i]);
}
auto argc = args.length;
writeln("Initialize embedded R (library)");
version(darwin) {
setenv("R_HOME","/Library/Frameworks/R.framework/Resources/", 1);
} else version(linux) {
setenv("R_HOME","/usr/lib/R",1);
} else {
throw new Exception("Can not find R libraries on this system");
}
Rf_initEmbeddedR(argc, argv.ptr);
}
void R_Close() {
writeln("Shutting down R");
PutRNGstate();
R_SaveGlobalEnv();
Rf_endEmbeddedR(0);
}
int main()
{
R_Init();
// call an Rlib function
GetRNGstate();
writeln(" - norm_rand: " ~ to!string(norm_rand()));
writeln(" - norm_rand: " ~ to!string(norm_rand()));
writeln(" - norm_rand: " ~ to!string(norm_rand()));
writeln(" - unif_rand: " ~ to!string(unif_rand()));
writeln(" - unif_rand: " ~ to!string(unif_rand()));
writeln(" - unif_rand: " ~ to!string(unif_rand()));
R_Close();
return 0;
}
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