pradal

name: vclimb_openalea
channels:
  - anaconda
  - defaults
  - openalea
dependencies:
  - alabaster=0.7.12=py27_0
  - asn1crypto=0.24.0=py27_0
  - babel=2.6.0=py27_0
  - backports=1.0=py27_1

pradal

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: osx-64
@EXPLICIT
https://conda.anaconda.org/openalea/osx-64/ann-1.1.2-0.tar.bz2
https://repo.anaconda.com/pkgs/main/osx-64/blas-1.0-mkl.tar.bz2
https://repo.anaconda.com/pkgs/main/osx-64/bzip2-1.0.6-h1de35cc_5.tar.bz2
https://repo.anaconda.com/pkgs/main/osx-64/ca-certificates-2018.03.07-0.tar.bz2
https://conda.anaconda.org/openalea/osx-64/gmp-6.1.1-0.tar.bz2
https://repo.continuum.io/pkgs/free/osx-64/icu-54.1-0.tar.bz2

pradal

name: impulse
channels:
  - openalea
  - defaults
dependencies:
  - alabaster=0.7.11=py27_0
  - appdirs=1.4.3=py27h28b3542_0
  - appnope=0.1.0=py27hb466136_0
  - asn1crypto=0.24.0=py27_0
  - attrs=18.2.0=py27h28b3542_0

pradal

import autowig
asg = autowig.AbstractSemanticGraph()

import sys, os
from path import Path

prefix = Path(sys.prefix).abspath()
headers = list((prefix/'include'/'stat_tool').walkfiles('*.h'))

flags = ['-x', 'c++', '-std=c++11', '-ferror-limit=0', '-Wno-switch', '-Wno-unknown-attributes']

pradal

pradal

pradal

== AutoWIG: Wrapping very large C++ libraries in Python automatically

Most of Python and R scientific packages incorporate compiled scientific libraries to speed up the code and reuse legacy libraries. While several semi-automatic solutions exist to wrap these compiled libraries, the process of wrapping a large library is cumbersome and time consuming.

In this paper, we introduce AutoWIG, a Python package that wraps automatically compiled libraries into high-level languages using LLVM/Clang technologies and the Mako templating engine.

Our approach is automatic, extensible, and applies to complex C++ libraries, composed of thousands of classes or incorporating modern meta-programming constructs.

pradal

# Author: Christophe Pradal

# Install minimal debian pkgs
apt-get update -yqq  && apt-get install -yqq \
  wget \
  bzip2 \
  git \
  libglib2.0-0 \
  libsm6 \
  libxrender \

pradal

""" Classical git command to manage OpenAlea workflow

Example
=======

    >>> cd mydir
    >>> user('pradal', gforge='cpradal')
    >>> clone('openalea')
    >>> remote('openalea')

pradal