I hereby claim:
- I am proteneer on github.
- I am yutong (https://keybase.io/yutong) on keybase.
- I have a public key whose fingerprint is A3DD C50A 4524 96E9 2A4F CFB3 91CE ACDB 2605 E878
To claim this, I am signing this object:
# processed from https://raw.githubusercontent.com/proteneer/timemachine/8ff69ee3c7bf248a7bdc5caf9fcae2e37fdb86ac/jax/harmonic_dij.py | |
import functools | |
import time | |
from tqdm import tqdm | |
import numpy as onp | |
from jax.config import config; config.update("jax_enable_x64", True) | |
import jax | |
import jax.numpy as np |
import functools | |
import numpy as onp | |
import jax | |
import jax.numpy as np | |
from timemachine.potentials import bonded | |
param_idxs = np.array([ | |
[0,1], |
I hereby claim:
To claim this, I am signing this object:
#include <OpenMM.h> | |
#include <iostream> | |
#include <fstream> | |
#include <limits> | |
using namespace OpenMM; | |
using namespace std; | |
extern "C" void registerSerializationProxies(); | |
extern "C" void registerOpenCLPlatform(); |
import tornado.web | |
import tornado.httpserver | |
import tornado.ioloop | |
import process2 | |
import tornado.netutil | |
import redis | |
import signal | |
import time | |
import sys | |
import os |
import simtk.openmm | |
import simtk.unit as unit | |
import math | |
state = simtk.openmm.XmlSerializer.deserialize(open('state.xml').read()) | |
system = simtk.openmm.XmlSerializer.deserialize(open('system.xml').read()) | |
for i, force in enumerate(system.getForces()): | |
force.setForceGroup(i) | |
system.getForce(3).setReciprocalSpaceForceGroup(6) |
#define LINUX | |
#ifndef LINUX | |
#include <conio.h> /* kbhit(), getch() */ | |
#else | |
#include <sys/time.h> /* struct timeval, select() */ | |
/* ICANON, ECHO, TCSANOW, struct termios */ | |
#include <termios.h> /* tcgetattr(), tcsetattr() */ | |
#include <cstdlib> /* atexit(), exit() */ |
count = 10000 | |
start = time.time() | |
for i in range(count): | |
rc.set('bar',1) | |
rc.set('bar',1) | |
rc.set('bar',1) | |
rc.set('bar',1) | |
print time.time()-start |
import redis | |
rc = redis.Redis(port=6782) | |
rc.flushdb() | |
class HashSet(object): | |
_rc = None | |
_rmaps = [] | |
@classmethod |
import redis | |
import threading | |
class Listener(threading.Thread): | |
def __init__(self, r, channels): | |
threading.Thread.__init__(self) | |
self.redis = r | |
self.pubsub = self.redis.pubsub() | |
self.pubsub.subscribe(channels) |