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{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install RISE\n", | |
"!/usr/local/bin/jupyter contrib install --system\n", | |
"!/usr/local/bin/jupyter rise install rise --py --sys-prefix\n", | |
"!/usr/local/bin/jupyter-nbextension enable rise --py --sys-prefix" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install matplotlib" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!jupyter nbextension enable --py --system widgetsnbextension" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install folium" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install nglview==1.0.b2\n", | |
"!jupyter-nbextension enable nglview --py --sys-prefix" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install MDAnalysis" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!apt-get update && apt-get install -y frescobaldi && apt-get clean\n", | |
"!pip3 install music21\n", | |
"!apt-get install -y musescore" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install jupyter-wysiwyg\n", | |
"!jupyter nbextension install --py jupyter_wysiwyg\n", | |
"!jupyter nbextension enable --py jupyter_wysiwyg" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install schemdraw" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!apt-get install -y asymptote \n", | |
"%install_ext http://raw.github.com/azjps/ipython-asymptote/master/asymagic.py" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!pip3 install sympy" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"#Is this py2?\n", | |
"#!apt-get install -y python-rdkit librdkit1 rdkit-data" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": { | |
"scrolled": true | |
}, | |
"outputs": [], | |
"source": [ | |
"!apt-get install -y graphviz\n", | |
"!pip3 install graphviz" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.5.2" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 2 | |
} |
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pip3 install RISE
jupyter-nbextension install rise --py --sys-prefix
jupyter-nbextension enable rise --py --sys-prefix