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Graph algebra parser/evaluator
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# | |
# graph_algebra.py | |
# | |
# A rough implementation of a graph algebra. | |
# | |
# References: | |
# https://statagroup.com/articles/an-algebra-for-graph-structures | |
# https://www.youtube.com/watch?v=EdQGLewU-8k | |
# | |
# Copyright 2020, Paul McGuire | |
# | |
""" | |
BNF: | |
vertex := ident | number | |
graph_decl := '<' [vertex]... '>' | |
graph_ref := graph_decl | ident | |
assignment := ident '=' graph_expr | |
graph_expr := graph_term ('+' graph_term)... | |
graph_term := graph_atom ('->' graph_atom)... | |
graph_atom := graph_ref | '(' graph_expr ')' | |
""" | |
from itertools import product | |
class Graph: | |
def __init__(self, verts): | |
self.vertices = verts[:] | |
self.edges = [] | |
def connect(self, other): | |
ret = Graph(sorted(set(self.vertices + other.vertices))) | |
ret.edges = sorted(set(self.edges | |
+ other.edges | |
+ list(product(self.vertices, other.vertices))) | |
) | |
return ret | |
def overlay(self, other): | |
ret = Graph(sorted(set(self.vertices + other.vertices))) | |
ret.edges = sorted(set(self.edges + other.edges)) | |
return ret | |
def __repr__(self): | |
return "Graph({}, {})".format(self.vertices, self.edges) | |
def plot(self): | |
import networkx | |
out = networkx.Graph() | |
out.add_nodes_from(self.vertices) | |
out.add_edges_from(self.edges) | |
print("nx.Graph(", out.nodes, ',', out.edges, ")") | |
# networkx.draw(out) | |
import pyparsing as pp | |
LPAR, RPAR, EQ = map(pp.Suppress, '()=') | |
ident = pp.pyparsing_common.identifier | |
graph_ident = ident() | |
vertex = graph_ident | pp.originalTextFor(pp.pyparsing_common.number) | |
GRAPH_BEGIN, GRAPH_END = map(pp.Suppress, "<>") | |
graph_decl = pp.Group(GRAPH_BEGIN + vertex[...] + GRAPH_END) | |
graph_ref = graph_decl | graph_ident | |
ident_map = {} | |
graph_decl.addParseAction(lambda t: Graph(*t)) | |
graph_ident.addParseAction(lambda t: ident_map.get(t[0])) | |
def connect_pa(t): | |
ret = t[0][0] | |
for operand in t[0][2::2]: | |
ret = ret.connect(operand) | |
return ret | |
def overlay_pa(t): | |
ret = t[0][0] | |
for operand in t[0][2::2]: | |
ret = ret.overlay(operand) | |
return ret | |
graph_expr = pp.infixNotation(graph_ref, [ | |
(pp.oneOf('-> →'), 2, pp.opAssoc.LEFT, connect_pa), | |
('+', 2, pp.opAssoc.LEFT, overlay_pa), | |
]) | |
assignment = ident("lhs") + EQ + graph_expr("rhs") | |
def assign_graph_value(t): | |
ident_map[t.lhs] = t.rhs | |
assignment.addParseAction(assign_graph_value) | |
SHOW = pp.CaselessKeyword("show") | |
show_command = SHOW + graph_expr | |
PLOT = pp.CaselessKeyword("plot") | |
plot_command = PLOT + graph_expr('graph') | |
plot_command.addParseAction(lambda t: t.graph.plot()) | |
parser = assignment | show_command | plot_command | graph_expr | |
parser.runTests(""" | |
g1 = <A B C> + <C> -> <F> | |
show <A B C> -> <F> | |
g2 = <A> -> <D> -> <E> | |
g3 = g1 + g2 | |
g4 = <> | |
g5 = g4 → g3 | |
g3 | |
plot g5 | |
""") |
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