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_config.yml

# could you please create a new revision to this Gist copy/pasting your _config.yml as-is?

Plugins

gems:

• jekyll-sitemap
  safe: false

Build Settings

markdown: kramdown
permalink: pretty
exclude: ['/automation/', '/illustrator/','README.md', 'LICENSE.txt', 'CNAME']

Site Settings

title: "Drugs From Dirt"
email: "drugsfromdirt@gmail.com"
description: "A Citizen Science Project to Catalogue Bacterial Biosynthetic Diversity"
baseurl: "/DrugsFromDirt"
url: "https://drugsfromdirt.org"
permalink: "/blog/:title"
googleAnalyticsTrackingId: "UA-43643469-5"
googleAnalyticsSiteUrl: "gdg-x.github.io"
siteVerification: "b9imDOrFawXaBXCC4r3uJDdswSYcalD-wWpMYhFq-no"

Locations Collections

This is where Location information is stored on a per-sample basis.

collections:
locations:
output: true
permalink: /locations/:title/

Organizer Info

organizerName: "The Rockefeller University"
organizerAlternateName: "The Brady Lab"
organizerDescription: "Open and volunteer geek communities who create exciting projects and share experience about Google technology with passion."
organizerEmail: "drugsfromdirt@gmail.com"
organizerLogo: "/img/seo/organizer-logo.png"
organizerLink: "http://lab.rockefeller.edu/brady"

Head

metaKeywords: "metagenomics, drug discovery, science, microbiology, genetics"
twitterAccount: "@metagenome"
socialImageSrcGooglePlus: "/img/seo/sharing-google-plus.png"
socialImageSrcTwitter: "/img/seo/sharing-twitter.png"
socialImageSrcFacebook: "/img/seo/sharing-facebook.png"

Documents

c4pUrl: "https://docs.google.com/forms/d/e/1FAIpQLSfci_dEJHTFOmbLjGY4j6-mjvYex0kCoQPe4OdNr9TEd8eonA/viewform"

Navigation

navigationLinks:

• {permalink: "/", text: "Home"}
• {permalink: "/news/", text: "News"}
• {permalink: "/molecules/", text: "Molecules"}
• {permalink: "/USlocations/", text: "US Locations"}
• {permalink: "/Worldlocations/", text: "World Locations"}
• {permalink: "/submission/", text: "Submission"}
  #- {permalink: "/biosynthesis/", text: "Biosynthesis"}
  bottomNavigationLinks:
• {permalink: "/submission/", text: "Donate Your Soil"} #"Send Us Your Soil"}

- {link: "https://docs.google.com/forms/d/e/1FAIpQLSfci_dEJHTFOmbLjGY4j6-mjvYex0kCoQPe4OdNr9TEd8eonA/viewform", text: "Donate Your Soil"} #"Send Us Your Soil"}

- {link: "https://docs.google.com/forms/d/e/1FAIpQLSc1REu2j4dLVh3LG4ACLlG_Vif_ZsH7-UCNmViMFbFZCik07Q/viewform?embedded=true", text: "Join Our Mailing List"}

rightNavigationButtons:

• {permalink: "/submission/", text: "Donate Your Soil"} #"Send Us Your Soil"}

- {link: "https://docs.google.com/forms/d/e/1FAIpQLSfci_dEJHTFOmbLjGY4j6-mjvYex0kCoQPe4OdNr9TEd8eonA/viewform", text: "Donate Your Soil"} #"Send Us Your Soil"}

#- {link: "https://docs.google.com/forms/d/e/1FAIpQLSc1REu2j4dLVh3LG4ACLlG_Vif_ZsH7-UCNmViMFbFZCik07Q/viewform?embedded=true", text: "Donate Your Soil"} #"Send Us Your Soil"}

- {link: "https://docs.google.com/forms/d/e/1FAIpQLSc1REu2j4dLVh3LG4ACLlG_Vif_ZsH7-UCNmViMFbFZCik07Q/viewform?embedded=true", text: "Join Our Mailing List"}

Hero Block

heroImage: "hero.jpg"
#heroImage: "usa-vanco.png"
heroTitle: "Drugs from Dirt"
eventDate: "2017-2018"
typeoutTextValues: '"", "Season", "Ukraine", "Germany", "USA"'
typeoutFallback: "Season"
heroButtons:

• {permalink: "/submission/", text: "Donate Your Soil"} #"Send Us Your Soil"}

- {link: "https://docs.google.com/forms/d/e/1FAIpQLSfci_dEJHTFOmbLjGY4j6-mjvYex0kCoQPe4OdNr9TEd8eonA/viewform", text: "Donate Your Soil"} #"Send Us Soil"}

- {permalink: "https://docs.google.com/forms/d/e/1FAIpQLSc1REu2j4dLVh3LG4ACLlG_Vif_ZsH7-UCNmViMFbFZCik07Q/viewform?embedded=true", text: "Join Our Mailing List"}

About Block

aboutTitle: "About Drugs from Dirt"
aboutBlock:

• {title: "Soil Collection", image: "trowel.jpg", text: "Soil samples are collected along with data related to the soil and its location."}

Detailed protocol for collection can be shared."}

• {title: "DNA Isolation", image: "DNAisolation.jpg", text: "Once the soil samples are received, our laboratory extracts the DNA present in the collected samples."}
• {title: "PCR Amplification", image: "PCR.jpg", text: "With degenerate primers, we use targeted PCR to amplify conserved biosynthetic domains from this DNA." }
• {title: "DNA Sequencing", image: "Sequencing.png", text: "The generated amplicons from the PCR amplification are then sequenced."}
• {title: "Data Analysis", image: "DataAnalysis.jpg", text: "The sequenced reads are analyzed through our custom pipeline against our carefully curated database."}
• {title: "Data display", image: "data.jpg", text: "Finally, the data is released on the Drugs From Dirt website, identified molecules at the colletion sites can be vizualized."}

Statistic Block

statisticBlockImage: "hero1.jpg" #"statistic.jpg"
statisticBlock:

• {count: "1000000000", specialCharacter: "+", info: "clones recovered", detail: "and growing"}

- {count: "1150", specialCharacter: "", info: "gene clusters", detail: "from mibig"}

- {count: "200", specialCharacter: "+", info: "soils", detail: "in the US"}

- {count: "100", specialCharacter: "M", info: "amplicons", detail: "generated"}

- {count: "250", specialCharacter: "+", info: "participants", detail: "around the world"}

Latest News Block

latestNewsTitle: "Latest news"

socialLinks:

• {link: "https://plus.google.com/b/102444623953913144164", icon: "google-plus"}
• {link: "https://twitter.com/intent/user?screen_name=DFD", icon: "twitter"}
• {link: "https://facebook.com/DFD", icon: "facebook"}
• {permalink: "/feed.xml", icon: "rss"}
  footerBlocks:

title: "Links"
links:

• {link: "http://drugsfromdirt.org", text: "DrugsFromDirt.org"}

title: "Contacts"
links:

• {link: "mailto:drugsfromdirt@gmail.com", text: "drugsfromdirt@gmail.com"}

title: "FAQ"
links:
#- {permalink: "/nagoya/", text: "Nagoya Protocol"}

• {permalink: "/bibliography/", text: "Select Bibliography"}
  #- {permalink: "/terms/", text: "Terms and conditions"}

Blog

#blogTitle: "Latest news"
#blogCommentsEnabled: false
#discusShortName: "dfd"

Team Block

teamBlockTitle: "About us"
aboutUs: ""