trilinos.rb

require 'formula'
# brew install  --without-suite-sparse --without-tbb --without-python --with-mpi

class Trilinos < Formula
  homepage 'http://trilinos.sandia.gov'
  url 'http://trilinos.sandia.gov/download/files/trilinos-11.10.2-Source.tar.gz'
  sha1 'f7442cef35c4dea4f3535e0859deda88f68e72fc'
  head 'https://software.sandia.gov/trilinos/repositories/publicTrilinos', :using => :git

  option "with-teko",     "Enable the Teko secondary-stable package"
  option "with-shylu",    "Enable the ShyLU experimental package"
  option "without-check", "Skip build time checks (not recommended)"
  option :cxx11

  depends_on "cmake"        => :build
  depends_on "boost"        => :recommended
  depends_on "scotch"       => :optional  # Build fails with Scotch.
  depends_on "netcdf"       => :optional
  depends_on "adol-c"       => :optional
  depends_on "suite-sparse" => :recommended
  depends_on "cppunit"      => :optional
  depends_on "eigen"        => :optional
  depends_on "glpk"         => :optional
  depends_on "hdf5"         => :optional
  depends_on "hwloc"        => :optional
  depends_on "hypre"        => :optional
  depends_on "metis"        => :optional
  depends_on "mumps"        => :optional
  depends_on "petsc"        => :optional
  depends_on "parmetis"     => :optional
  depends_on "scalapack"    => :optional
  depends_on "superlu"      => :optional
  depends_on "tbb"          => :recommended

  depends_on :mpi => [:cc, :cxx, :recommended]
  depends_on :fortran => :recommended
  depends_on :x11 => :recommended

  depends_on :python => :recommended
  depends_on "swig208" if build.with? :python

  def onoff(s, cond)
    s + ((cond) ? "ON" : "OFF")
  end
  
  # Fix Sacado tests.
  patch :DATA

  def install

    args = %W[-DBUILD_SHARED_LIBS=ON
              -DTPL_ENABLE_BLAS=ON
              -DTPL_ENABLE_LAPACK=ON
              -DTPL_ENABLE_Zlib:BOOL=ON
              -DTrilinos_ENABLE_ALL_PACKAGES=ON
              -DTrilinos_ENABLE_ALL_OPTIONAL_PACKAGES=ON
              -DTrilinos_ENABLE_TESTS:BOOL=ON
              -DTrilinos_ENABLE_EXAMPLES:BOOL=OFF
              -DTrilinos_VERBOSE_CONFIGURE:BOOL=OFF
              -DTrilinos_WARNINGS_AS_ERRORS_FLAGS=\"\"
              -DCMAKE_INSTALL_PREFIX=#{prefix}
              -DCMAKE_BUILD_TYPE=Release
    ]
    args << onoff("-DTPL_ENABLE_MPI:BOOL=",         (build.with? :mpi))
    args << onoff("-DTrilinos_ENABLE_OpenMP:BOOL=", (ENV.compiler != :clang))
    args << onoff("-DTrilinos_ENABLE_CXX11:BOOL=",  (build.cxx11?))

    # Extra non-default packages
    args << onoff("-DTrilinos_ENABLE_ShyLU:BOOL=",  (build.with? "shylu"))
    args << onoff("-DTrilinos_ENABLE_Teko:BOOL=",   (build.with? "teko"))

    # Third-party libraries
    args << onoff("-DTPL_ENABLE_Boost:BOOL=",       (build.with? "boost"))
    args << onoff("-DTPL_ENABLE_Scotch:BOOL=",      (build.with? "scotch"))
    args << onoff("-DTPL_ENABLE_Netcdf:BOOL=",      (build.with? "netcdf"))
    args << onoff("-DTPL_ENABLE_ADOLC:BOOL=",       (build.with? "adol-c"))
    args << onoff("-DTPL_ENABLE_AMD:BOOL=",         (build.with? "suite-sparse"))
    args << onoff("-DTPL_ENABLE_CSPARSE:BOOL=",     (build.with? "suite-sparse"))
    args << onoff("-DTPL_ENABLE_CHOLMOD:BOOL=",     (build.with? "suite-sparse"))
    args << onoff("-DTPL_ENABLE_UMFPACK:BOOL=",     (build.with? "suite-sparse"))
    args << "-DUMFPACK_LIBRARY_NAMES=umfpack;amd;colamd;cholmod;suitesparseconfig" if build.with? "suite-sparse"
    args << onoff("-DTPL_ENABLE_CppUnit:BOOL=",     (build.with? "cppunit"))
    args << onoff("-DTPL_ENABLE_Eigen:BOOL=",       (build.with? "eigen"))
    args << "-DEigen_INCLUDE_DIRS=#{Formula['eigen'].include}/eigen3" if build.with? "eigen"
    args << onoff("-DTPL_ENABLE_GLPK:BOOL=",        (build.with? "glpk"))
    args << onoff("-DTPL_ENABLE_HDF5:BOOL=",        (build.with? "hdf5"))
    args << onoff("-DTPL_ENABLE_HWLOC:BOOL=",       (build.with? "hwloc"))
    args << onoff("-DTPL_ENABLE_HYPRE:BOOL=",       (build.with? "hypre"))
    args << onoff("-DTPL_ENABLE_METIS:BOOL=",       (build.with? "metis"))
    args << onoff("-DTPL_ENABLE_MUMPS:BOOL=",       (build.with? "mumps"))
    args << onoff("-DTPL_ENABLE_PETSC:BOOL=",       (build.with? "petsc"))
    args << onoff("-DTPL_ENABLE_PARMETIS:BOOL=",    (build.with? "parmetis"))
    args << onoff("-DTPL_ENABLE_SCALAPACK:BOOL=",   (build.with? "scalapack"))
    args << onoff("-DTPL_ENABLE_SuperLU:BOOL=",     (build.with? "superlu"))
    args << onoff("-DTPL_ENABLE_TBB:BOOL=",         (build.with? "tbb"))
    args << onoff("-DTPL_ENABLE_X11:BOOL=",         (build.with? :x11))

    args << onoff("-DTrilinos_ENABLE_Fortran=",     (build.with? :fortran))

    args << onoff("-DTrilinos_ENABLE_PyTrilinos:BOOL=", (build.with? :python))
    args << "-DPyTrilinos_INSTALL_PREFIX:PATH=#{prefix}" if build.with? :python

    mkdir "build" do
      system "cmake", "..", *args
      system "make", "VERBOSE=1"
      system "ctest" if build.with? "check"
      system "make install"
    end
  end

  test do
    system "#{bin}/Epetra_BasicPerfTest_test.exe 16 12 1 1 25 -v"
    system "mpirun -np 2 #{bin}/Epetra_BasicPerfTest_test.exe 10 12 1 2 9 -v" if build.with? :mpi
    system "#{bin}/Epetra_BasicPerfTest_test_LL.exe 16 12 1 1 25 -v"
    system "mpirun -np 2 #{bin}/Epetra_BasicPerfTest_test_LL.exe 10 12 1 2 9 -v" if build.with? :mpi
    # system "#{bin}/Ifpack2_BelosTpetraHybridPlatformExample.exe"  # Missing library!!
    system "#{bin}/KokkosClassic_SerialNodeTestAndTiming.exe"
    system "#{bin}/KokkosClassic_TPINodeTestAndTiming.exe"
    system "#{bin}/KokkosClassic_TBBNodeTestAndTiming.exe" if build.with? "tbb"
    system "#{bin}/Tpetra_GEMMTiming_TBB.exe" if build.with? "tbb"
    # system "#{bin}/Tpetra_GEMMTiming_TPI.exe"  # Fails!!
  end
end

__END__
diff --git a/packages/sacado/src/Sacado_MathFunctions.hpp b/packages/sacado/src/Sacado_MathFunctions.hpp
index 37901d4..7853b5f 100644
--- a/packages/sacado/src/Sacado_MathFunctions.hpp
+++ b/packages/sacado/src/Sacado_MathFunctions.hpp
@@ -30,6 +30,7 @@
 #ifndef SACADO_MATHFUNCTIONS_HPP
 #define SACADO_MATHFUNCTIONS_HPP
 
+#include <cmath>
 #include "Sacado_ConfigDefs.h"
 
 #define UNARYFUNC_MACRO(OP,FADOP)                                       \