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Shahnawaz Ahmed quantshah

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quantshah / contour.ipynb
Last active June 23, 2016 17:47
gist for ganj
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@quantshah
quantshah / scipy-17.ipynb
Created July 21, 2016 21:14
scipy 17 fail
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@quantshah
quantshah / qcircuit.ipynb
Last active July 23, 2016 22:25
A very basic Quantum circuit implementation
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@quantshah
quantshah / plot.ipynb
Last active August 11, 2016 13:53
Ivim plots for f
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@quantshah
quantshah / Gsoc-final.md
Last active August 22, 2016 22:19
Google Summer of Code 2016 : Intravoxel Incoherent Motion Techniques in Dipy

Google Summer of Code 2016

Implementing Intravoxel Incoherent Motion (IVIM) Techniques in Dipy

-Shahnawaz Ahmed (shahnawaz.ahmed95@gmail.com)

Dipy is a python library for analysis of diffusion-weighted MRI (dMRI). Diffusion patterns can reveal microscopic details about tissue architecture and is used in clinical as well as neuroscience research. The intra-voxel incoherent motion (IVIM) model describes diffusion and perfusion in the signal acquired with diffusion MRI as :

S(b) = S0(f e^(- b D*) + (1 - f) e^(-b D))

Commits : https://github.com/sahmed95/dipy/commits/ivim_linear/dipy

PR and discussion : dipy/dipy#1110

Blog : http://sahmed95.blogspot.in/

@quantshah
quantshah / parser_function.ipynb
Created November 14, 2016 20:38
A parser to update OpenFoam mesh files using values from GUI
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@quantshah
quantshah / rank_test.ipynb
Created April 2, 2017 03:15
Ranksum test for Phosphorylation
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@quantshah
quantshah / init.vim
Created December 30, 2017 17:12 — forked from gnarula/init.vim
Neovim config
" Use vim-plug
call plug#begin('~/.local/share/nvim/plugged')
Plug 'Shougo/deoplete.nvim', { 'do': ':UpdateRemotePlugins' }
Plug 'zchee/deoplete-jedi'
Plug 'Shougo/echodoc.vim'
Plug 'junegunn/fzf', { 'dir': '~/.fzf', 'do': './install --all' }
Plug 'junegunn/fzf.vim'
Plug 'scrooloose/nerdcommenter'
Plug 'vim-airline/vim-airline'
Plug 'vim-airline/vim-airline-themes'
@quantshah
quantshah / heom_example.ipynb
Created January 11, 2018 08:04
General HEOM code for sum of exponentials
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@quantshah
quantshah / autodiff.ipynb
Created April 10, 2019 14:03
Automatic differentiation and gradient based optimization with Autograd and Pytorch
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