raybsmith

pyver="3.4"
pypath="/usr/bin/python3.4"
pyver="3.5"
pypath="/home/raymond/.pyenv/versions/3.5.2/bin/python3.5"
libs_list="boost ref_blas_lapack umfpack idas superlu superlu_mt bonmin nlopt trilinos deal.ii"
builds_list="dae superlu superlu_mt trilinos ipopt bonmin nlopt deal.ii"
#libs_list="boost"
#builds_list=""

for lib in ${libs_list}; do

raybsmith

>>> This driver now uses DRI3 as the default Direct Rendering
    Infrastructure. You can try falling back to DRI2 if you run
    into trouble. To do so, save a file with the following
    content as /etc/X11/xorg.conf.d/20-intel.conf :
      Section "Device"
        Identifier  "Intel Graphics"
        Driver      "intel"
        Option      "DRI" "2"             # DRI3 is now default
        #Option      "AccelMethod"  "sna" # default
        #Option      "AccelMethod"  "uxa" # fallback

raybsmith

==> Making package: cgns 3.3.0-1 (Tue Sep 20 09:07:31 PDT 2016)
==> Checking runtime dependencies...
==> Checking buildtime dependencies...
==> Retrieving sources...
  -> Found cgns-3.3.0.tar.gz
==> Validating source files with sha256sums...
    cgns-3.3.0.tar.gz ... Passed
==> Extracting sources...
  -> Extracting cgns-3.3.0.tar.gz with bsdtar
==> Starting prepare()...

raybsmith

==> Making package: silo 4.10.2-5 (Mon Sep 19 12:54:11 PDT 2016)
==> Checking runtime dependencies...
==> Checking buildtime dependencies...
==> Retrieving sources...
  -> Found silo-4.10.2.tar.gz
  -> Found silo-4.10.2-rocket-test.patch
  -> Found silo-4.10.2-skip-test.patch
  -> Found silo-4.10.2-remove-mpiposix.patch
==> Validating source files with sha256sums...
    silo-4.10.2.tar.gz ... Passed

raybsmith

from __future__ import division, print_function, absolute_import
import fipy as fp
import matplotlib as mpl
import matplotlib.pyplot as plt
import numpy as np

axtickfsize = 18
labelfsize = 20
legfsize = labelfsize - 2
txtfsize = labelfsize - 2

raybsmith

from __future__ import division, print_function, absolute_import
import fipy as fp
import matplotlib as mpl
import matplotlib.pyplot as plt
import numpy as np

axtickfsize = 18
labelfsize = 20
legfsize = labelfsize - 2
txtfsize = labelfsize - 2

raybsmith

import time


def is_prime(val, primes_smaller):
    """Determine if a number is prime given a list of all primes less than it."""
    cutoff = int(val**(0.5))
    val_primeness = True
    for testval in primes_smaller:
        if val - (val // testval)*testval == 0:
            val_primeness = False

raybsmith

raymond@arch:~$ export "PATH=~/docs/bazantgroup/mpetwork/mpet:$PATH"
raymond@arch:~$ echo $PATH
~/docs/bazantgroup/mpetwork/mpet:/usr/local/sbin:/usr/local/bin:/usr/bin:/usr/lib/jvm/default/bin:/opt/opencascade/bin:/usr/bin/site_perl:/usr/bin/vendor_perl:/usr/bin/core_perl:/home/raymond/bin:/home/raymond/MATLAB/R2013a/bin
raymond@arch:~$ python
Python 3.5.2 (default, Jun 28 2016, 08:46:01)
[GCC 6.1.1 20160602] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import mpet
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>

raybsmith

[flake8]
ignore = W503,E226,E123,E301,E402,E302,E265,E231
max-line-length = 99

raybsmith

[*] Building trilinos...
Scanning dependencies of target epetra
Scanning dependencies of target teuchos
[  0%] Building CXX object packages/epetra/src/CMakeFiles/epetra.dir/Epetra_BLAS.cpp.o
[  1%] Building CXX object packages/epetra/src/CMakeFiles/epetra.dir/Epetra_BasicDirectory.cpp.o
[  1%] Building CXX object packages/epetra/src/CMakeFiles/epetra.dir/Epetra_BasicRowMatrix.cpp.o
[  1%] Building CXX object packages/epetra/src/CMakeFiles/epetra.dir/Epetra_BlockMap.cpp.o
[  2%] Building CXX object packages/teuchos/src/CMakeFiles/teuchos.dir/Teuchos_BLAS.cpp.o
[  2%] Building CXX object packages/teuchos/src/CMakeFiles/teuchos.dir/Teuchos_CTimeMonitor.cpp.o
[  2%] Building CXX object packages/teuchos/src/CMakeFiles/teuchos.dir/Teuchos_CommandLineProcessor.cpp.o