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rbiswas4/gist:f8b98d76002abfce39ce

Created November 13, 2015 06:30
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gistfile1.txt
time[sniacatsim_rebase]examples$ sshx $acc
Welcome to Ubuntu 14.04.3 LTS (GNU/Linux 3.13.0-63-generic x86_64)
* Documentation: https://help.ubuntu.com/
175 packages can be updated.
97 updates are security updates.
Last login: Thu Nov 12 19:02:59 2015 from d-173-250-158-216.dhcp4.washington.edu
rbiswas@accelerator:~$ cd .c
.cache/ .compiz/ .compiz-1/ .conda/ .config/ .continuum/
rbiswas@accelerator:~$ cd .conda/
rbiswas@accelerator:~/.conda$ ls
environments.txt
rbiswas@accelerator:~/.conda$ cd ~/.co
.compiz/ .compiz-1/ .conda/ .config/ .continuum/
rbiswas@accelerator:~/.conda$ cd ~/.co
.compiz/ .compiz-1/ .conda/ .config/ .continuum/
rbiswas@accelerator:~/.conda$ ls
environments.txt
rbiswas@accelerator:~/.conda$ ls
environments.txt
rbiswas@accelerator:~/.conda$ cd ..
rbiswas@accelerator:~$ ls
anaconda LSST_install
authorized_keys Miniconda-latest-Linux-x86_64.sh
bernease.pem opsim2_168.SIMLIB
cat_heatmap.html opsim_2168.SIMLIB.COMBINED.FULL
conda.log opsim_2168.SIMLIB.DEEP.FULL
data opsim_2168.SIMLIB.DEEP.FULL_new
Desktop opsim_2168.SIMLIB.MAIN.FULL
doc Public
Downloads results
Enigma_1189.SIMLIB.DEEP.COMBINED scratch
Enigma_1189.SIMLIB.DEEP.COMBINED.FirstYear snio.py
Enigma_1189.SIMLIB.DEEP.FirstYear soft
Enigma_1189.SIMLIB.DEEP.FULL src
▽
Enigma_1189.SIMLIB.MAIN.FirstYear sys
Enigma_1189.SIMLIB.MAIN.FULL texmf
fontconfig tmp
LSST_DEEP.SIMLIB.ENIGMA Untitled0.ipynb
rbiswas@accelerator:~$ cd
rbiswas@accelerator:~$ ls
anaconda LSST_install
authorized_keys Miniconda-latest-Linux-x86_64.sh
bernease.pem opsim2_168.SIMLIB
cat_heatmap.html opsim_2168.SIMLIB.COMBINED.FULL
conda.log opsim_2168.SIMLIB.DEEP.FULL
data opsim_2168.SIMLIB.DEEP.FULL_new
Desktop opsim_2168.SIMLIB.MAIN.FULL
doc Public
Downloads results
Enigma_1189.SIMLIB.DEEP.COMBINED scratch
Enigma_1189.SIMLIB.DEEP.COMBINED.FirstYear snio.py
Enigma_1189.SIMLIB.DEEP.FirstYear soft
Enigma_1189.SIMLIB.DEEP.FULL src
Enigma_1189.SIMLIB.MAIN.FirstYear sys
Enigma_1189.SIMLIB.MAIN.FULL texmf
fontconfig tmp
LSST_DEEP.SIMLIB.ENIGMA Untitled0.ipynb
rbiswas@accelerator:~$ vi conda.log
rbiswas@accelerator:~$ exit
logout
Connection to 172.28.191.144 closed.
time[sniacatsim_rebase]examples$ sshx $magneto
Last login: Mon Nov 9 15:59:22 2015 from d-173-250-158-216.dhcp4.washington.edu
ls
[rbiswas@magneto ~]$ ls
bin PUBLIC_LSSTDEEP
data PUBLIC_LSSTDEEP_ENIGMA1189
Desktop setup_lsst.sh
doc SIM
dotfiles snibc_nugent.ipynb
Enigma_1189.SIMLIB.DEEP.FirstYear snspectra.tgz
ENIGMA_LSSTDEEP soft
ENIGMA_LSSTDEEP_Y1 src
ENIGMA_LSSTMAIN storage.h5
eups_old test.csh
galTileIds test_modelcov.ipynb
install.log test_out.simlib
keplerlc.ipynb tmp
lsst
[rbiswas@magneto ~]$ exit
logout
Connection to magneto.astro.washington.edu closed.
time[sniacatsim_rebase]examples$ ls
GalaxyCatalog.ipynb catalogsExamples.py
SNCatalog_example.ipynb checkSSMobj.py
SNObject_example.ipynb configConnection.py
Twinkles_galphot.dat exampleSDSScatalogs.py
Twinkles_galphot_2.dat exit
baseValidation findChipNameExample.py
catalog_test_galaxyAgn.dat gals.dat
catalog_test_galaxyAgn_chunked.dat generatePhosimInput.py
catalog_test_galaxyBulge.dat makeGalaxyPhotCat.py
catalog_test_galaxyBulge_chunked.dat scratch
catalog_test_galaxyDisk.dat stars_airmass_test.dat
catalog_test_galaxyDisk_chunked.dat testSNData
catalog_test_msstars.dat test_reference.dat
catalog_test_msstars_chunked.dat test_why.dat
catalog_test_stars_aa.dat tutorials
catalog_test_stars_rd.dat validationFigures.py
time[sniacatsim_rebase]examples$ sshx $acc
Welcome to Ubuntu 14.04.3 LTS (GNU/Linux 3.13.0-63-generic x86_64)
* Documentation: https://help.ubuntu.com/
175 packages can be updated.
97 updates are security updates.
Last login: Thu Nov 12 19:08:50 2015 from d-173-250-158-216.dhcp4.washington.edu
rbiswas@accelerator:~$ ls
anaconda LSST_install
authorized_keys Miniconda-latest-Linux-x86_64.sh
bernease.pem opsim2_168.SIMLIB
cat_heatmap.html opsim_2168.SIMLIB.COMBINED.FULL
conda.log opsim_2168.SIMLIB.DEEP.FULL
data opsim_2168.SIMLIB.DEEP.FULL_new
Desktop opsim_2168.SIMLIB.MAIN.FULL
doc Public
Downloads results
Enigma_1189.SIMLIB.DEEP.COMBINED scratch
Enigma_1189.SIMLIB.DEEP.COMBINED.FirstYear snio.py
Enigma_1189.SIMLIB.DEEP.FirstYear soft
Enigma_1189.SIMLIB.DEEP.FULL src
Enigma_1189.SIMLIB.MAIN.FirstYear sys
Enigma_1189.SIMLIB.MAIN.FULL texmf
fontconfig tmp
LSST_DEEP.SIMLIB.ENIGMA Untitled0.ipynb
rbiswas@accelerator:~$ cd soft/
rbiswas@accelerator:~/soft$ ls
anaconda cfitsio LSST SNANA
Anaconda-2.2.0-Linux-x86_64.sh CFITSIO minuit_4snana tigres
Anaconda-2.2.0-Linux-x86.sh gsl root
rbiswas@accelerator:~/soft$ cd LSST/
rbiswas@accelerator:~/soft/LSST$ ls
eups_install installation
rbiswas@accelerator:~/soft/LSST$ cd installation/
rbiswas@accelerator:~/soft/LSST/installation$ ls
root
rbiswas@accelerator:~/soft/LSST/installation$ cd ..
rbiswas@accelerator:~/soft/LSST$ ls
eups_install installation
rbiswas@accelerator:~/soft/LSST$ cd eups_install/
rbiswas@accelerator:~/soft/LSST/eups_install$ ls
rbiswas@accelerator:~/soft/LSST/eups_install$ cd ..
rbiswas@accelerator:~/soft/LSST$ ls
eups_install installation
rbiswas@accelerator:~/soft/LSST$ cd ..
rbiswas@accelerator:~/soft$ ls
anaconda cfitsio LSST SNANA
Anaconda-2.2.0-Linux-x86_64.sh CFITSIO minuit_4snana tigres
Anaconda-2.2.0-Linux-x86.sh gsl root
rbiswas@accelerator:~/soft$ cd ..
rbiswas@accelerator:~$ ls
anaconda LSST_install
authorized_keys Miniconda-latest-Linux-x86_64.sh
bernease.pem opsim2_168.SIMLIB
cat_heatmap.html opsim_2168.SIMLIB.COMBINED.FULL
conda.log opsim_2168.SIMLIB.DEEP.FULL
data opsim_2168.SIMLIB.DEEP.FULL_new
Desktop opsim_2168.SIMLIB.MAIN.FULL
doc Public
Downloads results
Enigma_1189.SIMLIB.DEEP.COMBINED scratch
Enigma_1189.SIMLIB.DEEP.COMBINED.FirstYear snio.py
Enigma_1189.SIMLIB.DEEP.FirstYear soft
Enigma_1189.SIMLIB.DEEP.FULL src
Enigma_1189.SIMLIB.MAIN.FirstYear sys
Enigma_1189.SIMLIB.MAIN.FULL texmf
fontconfig tmp
LSST_DEEP.SIMLIB.ENIGMA Untitled0.ipynb
▽
rbiswas@accelerator:~$ cd
rbiswas@accelerator:~$ pwd
/home/rbiswas
rbiswas@accelerator:~$ ls
anaconda LSST_install
authorized_keys Miniconda-latest-Linux-x86_64.sh
bernease.pem opsim2_168.SIMLIB
cat_heatmap.html opsim_2168.SIMLIB.COMBINED.FULL
conda.log opsim_2168.SIMLIB.DEEP.FULL
data opsim_2168.SIMLIB.DEEP.FULL_new
Desktop opsim_2168.SIMLIB.MAIN.FULL
doc Public
Downloads results
Enigma_1189.SIMLIB.DEEP.COMBINED scratch
Enigma_1189.SIMLIB.DEEP.COMBINED.FirstYear snio.py
Enigma_1189.SIMLIB.DEEP.FirstYear soft
Enigma_1189.SIMLIB.DEEP.FULL src
Enigma_1189.SIMLIB.MAIN.FirstYear sys
Enigma_1189.SIMLIB.MAIN.FULL texmf
fontconfig tmp
LSST_DEEP.SIMLIB.ENIGMA Untitled0.ipynb
rbiswas@accelerator:~$ vi LSST_
LSST_DEEP.SIMLIB.ENIGMA LSST_install
rbiswas@accelerator:~$ vi LSST_install
rbiswas@accelerator:~$
rbiswas@accelerator:~$ file LSST_install
LSST_install: ASCII text
rbiswas@accelerator:~$ less LSST_install
rbiswas@accelerator:~$
rbiswas@accelerator:~$ exit
logout
Connection to 172.28.191.144 closed.
time[sniacatsim_rebase]examples$ sshx $edison
*****************************************************************
* *
* NOTICE TO USERS *
* --------------- *
* *
* Lawrence Berkeley National Laboratory operates this *
* computer system under contract to the U.S. Department of *
* Energy. This computer system is the property of the United *
* States Government and is for authorized use only. *Users *
* (authorized or unauthorized) have no explicit or implicit *
* expectation of privacy.* *
* *
* Any or all uses of this system and all files on this system *
* may be intercepted, monitored, recorded, copied, audited, *
* inspected, and disclosed to site, Department of Energy, and *
* law enforcement personnel, as well as authorized officials *
* of other agencies, both domestic and foreign. *By using *
* this system, the user consents to such interception, *
* monitoring, recording, copying, auditing, inspection, and *
* disclosure at the discretion of authorized site or *
* Department of Energy personnel.* *
* *
* *Unauthorized or improper use of this system may result in *
* administrative disciplinary action and civil and criminal *
* penalties. _By continuing to use this system you indicate *
* your awareness of and consent to these terms and conditions *
* of use. LOG OFF IMMEDIATELY if you do not agree to the *
* conditions stated in this warning._* *
* *
*****************************************************************
Last login: Wed Oct 7 21:10:41 2015 from d-108-179-150-117.dhcp4.washington.edu
----------------------------- Contact Information ------------------------------
NERSC Contacts http://www.nersc.gov/about/contact-us/
NERSC Status http://www.nersc.gov/users/live-status/
NERSC: 800-66-NERSC (USA) 510-486-8600 (outside continental USA)
----------------- Current Status as of 2015-11-12 14:16 PST --------------------
Compute Resources:
Cori: Available.
Edison: Available.
Notes: (11/10/15 10:50 PST) - A high queue priority for the
large jobs using more than 682 nodes is in place on Edison until
11/30. Please run your small jobs (using 682 nodes or less) on
Hopper until further notice. (10/29/15 15:14 PDT) - Edison is
scheduled to move to a new building on 11/30/2015. All files on
the /scratch1, scratch2, and /scratch3 file systems will be
purged. Please back up your files to HPSS.
Genepool: Available.
Hopper: Available.
PDSF: Available.
Global Filesystems:
DNA: Available.
Global Common: Available.
Global Homes: Available.
Project: Available.
ProjectB: Available.
Mass Storage Systems:
HPSS Backup: Available.
HPSS User: Available.
----------------- Service Status as of 2015-11-12 14:16 PST --------------------
All services are available.
-------------------------------- Planned Outages -------------------------------
Network: 11/13/15 10:00-13:00 PST, Scheduled maintenance.
Network switches ngf51-r27 and ngf51-r28 will have a firmware
update from 9am until noon. No user impact expected. These
switches provide connectivity for the meta-data servers for
/homes, /common, /project, /syscomm, dna and /projectb.
HPSS User: 11/18/15 9:00-13:00 PST, Scheduled maintenance.
NIM: 11/03/15 10:00-14:00 PST, Scheduled maintenance. CANCELED
Science Database Services: 11/03/15 11:00-12:00 PST, Scheduled maintenance. CANCELED
The Disk replacement for Mongodb4 which affected Matgen Users
was cancelled.
--------------------------------- Past Outages ---------------------------------
No Outages in Last 24 Hours
For past outages, see: http://my.nersc.gov/outagelog-cs.php
--------------------------------------------------------------------------------
rbiswas@edison08:~> cd /project/projectdirs/m1727/edison/
rbiswas@edison08:/project/projectdirs/m1727/edison> ls
ca-bundle.crt loadmodules.sh old_stuff tigres-0.1.0.tar.gz
conda-env-lsst-tigres lsst-stacks test-conda
rbiswas@edison08:/project/projectdirs/m1727/edison> cd test-conda/
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda> ls
bin conda-meta include lib opt share ssl var
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda> cd include/
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda/include> ls
openssl sqlite3ext.h tcl.h tclTomMath.h tkPlatDecls.h
python2.7 sqlite3.h tclPlatDecls.h tkDecls.h zconf.h
readline tclDecls.h tclTomMathDecls.h tk.h zlib.h
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda/include> cd ../bin/
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda/bin> ls
2to3 deactivate eups-setups.sh openssl python2 sqlite3
activate easy_install eups-setups.zsh pip python2.7 tclsh8.5
conda easy_install-2.7 f2py pydoc python-config wish8.5
c_rehash eups-setups.csh idle python smtpd.py
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda/bin> pwd
/project/projectdirs/m1727/edison/test-conda/bin
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda/bin> cd ..
rbiswas@edison08:/project/projectdirs/m1727/edison/test-conda> git status
# On branch master
#
# Initial commit
#
# Changes to be committed:
# (use "git rm --cached <file>..." to unstage)
#
# new file: ../loadmodules.sh
# new file: ../notes
{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"metadata": {
"collapsed": false
},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"/usr/local/manual/anaconda/lib/python2.7/site-packages/IPython/kernel/__init__.py:13: ShimWarning: The `IPython.kernel` package has been deprecated. You should import from ipykernel or jupyter_client instead.\n",
" \"You should import from ipykernel or jupyter_client instead.\", ShimWarning)\n",
"Duplicate object type id 25 specified: \n",
"Output object ids may not be unique.\n",
"This may not be a problem if you do not want globally unique id values\n",
"Duplicate object type id 40 specified: \n",
NORMAL >> ~/Downloads/GalaxyCatalog.ipynb.json < json << 0% : 1: 1
"~/Downloads/GalaxyCatalog.ipynb.json" 417L, 10645C
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