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renzok/fasta2tsv.awk

Last active October 7, 2015 13:14
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fasta to TSV
Raw
fasta2tsv.awk
awk 'BEGIN{RS=">"}NR>1{sub("\n","\t"); gsub("\n",""); print $0}'
Raw
fasta2tsv.sh
sed -e ':a;/^>/!N; /\n>/!s/\n//; ta' ncbi |cut -d '|' -f 2 | sed -e :a -e '/[0-9]$/N; s/\n/,/; ta'
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