I hereby claim:
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- I am rhshah (https://keybase.io/rhshah) on keybase.
- I have a public key whose fingerprint is A181 1641 8177 A8F6 F941 33AF 25FB 5E48 2056 63F4
To claim this, I am signing this object:
I hereby claim:
To claim this, I am signing this object:
#Install and use pip in a local directory without root/sudo access. #####By: @saurabhshri
##Why?
Many users when are given server access, do not have root (or sudo) privileges and can not simply do
sudo apt-get install python-pip
.
Here's an easy way you can install and use pip without root (or sudo) access in a local directory.
Note : This works without easy_install
too.
##How?
# See http://pacha.hk/2017-07-12_r_and_python_via_homebrew.html | |
# XCode CLT | |
xcode-select --install | |
# Update Homebrew and add formulae | |
brew update | |
# Check for broken dependencies and/or outdated packages | |
brew doctor |
stat_smooth_func <- function(mapping = NULL, data = NULL, | |
geom = "smooth", position = "identity", | |
..., | |
method = "auto", | |
formula = y ~ x, | |
se = TRUE, | |
n = 80, | |
span = 0.75, | |
fullrange = FALSE, | |
level = 0.95, |
REF=/proj/b2010040/private/nobackup/autoseqer-genome/genome/human_g1k_v37_decoy.fasta | |
DICT=/proj/b2010040/private/nobackup/autoseqer-genome/genome/human_g1k_v37_decoy.dict | |
GATKJAR=/home/daniel.klevebring/projects/tcga-maf-to-vcf/GenomeAnalysisTK.jar | |
WORKDIR=$HOME/Crisp/dakl/tcga-maf-to-vcf | |
mkdir -p $WORKDIR | |
cd $WORKDIR | |
#unpack maf to workdir | |
tar xvfz ~/projects/tcga-maf-to-vcf/pancan_cleaned_mafs.tar.gz |