Created
May 12, 2020 00:07
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(partial) EasyBuild log for failed build of /tmp/eb-a1qutd5s/files_pr10615/f/flex/flex-2.6.4-GCCcore-10.1.0.eb (PR #10615)
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| == 2020-05-11 20:07:22,222 easyblock.py:280 INFO This is EasyBuild 4.2.1.dev0-r018337e94442d83ec32fd9a9a242273b69996b1b (framework: 4.2.1.dev0-r018337e94442d83ec32fd9a9a242273b69996b1b, easyblocks: 4.2.1.dev0-r052da71632c1622d61a943795adf06241933b2db) on host ryzen37. | |
| == 2020-05-11 20:07:22,222 easyblock.py:286 INFO This is easyblock EB_flex from module easybuild.easyblocks.flex (/home/rob/git/eb-devel-install/eb/easybuild-easyblocks/easybuild/easyblocks/f/flex.py) | |
| == 2020-05-11 20:07:22,222 easyblock.py:843 INFO Build dir set to /eb/arch-znver2/build/flex/2.6.4/GCCcore-10.1.0 | |
| == 2020-05-11 20:07:22,222 easyblock.py:903 INFO Software install dir set to /eb/arch-znver2/software/flex/2.6.4-GCCcore-10.1.0 | |
| == 2020-05-11 20:07:22,222 easyblock.py:908 INFO Module install dir set to /eb/arch-znver2/modules/all | |
| == 2020-05-11 20:07:22,223 easyblock.py:265 INFO Init completed for application name flex version 2.6.4 | |
| == 2020-05-11 20:07:22,223 easyblock.py:3208 INFO Obtained application instance of for flex (easyblock: None) | |
| == 2020-05-11 20:07:22,223 one.py:159 INFO Skipping reformatting value for parameter 'toolchain' | |
| == 2020-05-11 20:07:22,223 one.py:159 INFO Skipping reformatting value for parameter 'toolchainopts' | |
| == 2020-05-11 20:07:22,223 filetools.py:1494 INFO Creating directory /tmp/eb-a1qutd5s/reprod_20200511200722_4145900 (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,223 easyblock.py:3385 INFO Dumped easyconfig instance to /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/flex-2.6.4-GCCcore-10.1.0.eb | |
| == 2020-05-11 20:07:22,223 filetools.py:1494 INFO Creating directory /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/easyblocks (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,223 filetools.py:2087 INFO /home/rob/git/eb-devel-install/eb/easybuild-easyblocks/easybuild/easyblocks/f/flex.py copied to /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/easyblocks/flex.py | |
| == 2020-05-11 20:07:22,223 easyblock.py:3400 INFO Dumped easyblock flex.py required for reproduction to /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/easyblocks | |
| == 2020-05-11 20:07:22,224 filetools.py:2087 INFO /home/rob/git/eb-devel-install/eb/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/easyblocks/configuremake.py | |
| == 2020-05-11 20:07:22,224 easyblock.py:3400 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-a1qutd5s/reprod_20200511200722_4145900/easyblocks | |
| == 2020-05-11 20:07:22,224 easyblock.py:1635 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2020-05-11 20:07:22,224 build_log.py:265 INFO building and installing flex/2.6.4-GCCcore-10.1.0... | |
| == 2020-05-11 20:07:22,224 filetools.py:1596 INFO Lock /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock does not exist | |
| == 2020-05-11 20:07:22,224 filetools.py:1537 INFO Creating lock at /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock... | |
| == 2020-05-11 20:07:22,224 filetools.py:1494 INFO Creating directory /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,224 filetools.py:1546 INFO Lock created: /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock | |
| == 2020-05-11 20:07:22,224 build_log.py:265 INFO fetching files... | |
| == 2020-05-11 20:07:22,224 easyblock.py:2968 INFO Starting fetch step | |
| == 2020-05-11 20:07:22,224 easyblock.py:2974 INFO Running method fetch_step part of step fetch | |
| == 2020-05-11 20:07:22,224 easyblock.py:1744 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2020-05-11 20:07:22,224 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/rob/git/eb-devel-install/eb/easybuild-framework/eb | |
| == 2020-05-11 20:07:22,224 tools.py:282 INFO Not considering /home/rob/git/eb-devel-install/eb (no easybuild/easyconfigs subdir found) | |
| == 2020-05-11 20:07:22,224 easyblock.py:671 INFO Found file flex-2.6.4.tar.gz at /eb/sources/f/flex/flex-2.6.4.tar.gz | |
| == 2020-05-11 20:07:22,224 easyblock.py:394 INFO Added sources: [{'name': 'flex-2.6.4.tar.gz', 'path': '/eb/sources/f/flex/flex-2.6.4.tar.gz', 'cmd': None, 'checksum': 'e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995', 'finalpath': '/eb/arch-znver2/build/flex/2.6.4/GCCcore-10.1.0'}] | |
| == 2020-05-11 20:07:22,225 easyblock.py:1785 INFO no patches provided | |
| == 2020-05-11 20:07:22,227 easyblock.py:1795 INFO md5 checksum for /eb/sources/f/flex/flex-2.6.4.tar.gz: 2882e3179748cc9f9c23ec593d6adc8d | |
| == 2020-05-11 20:07:22,227 easyblock.py:1795 INFO sha256 checksum for /eb/sources/f/flex/flex-2.6.4.tar.gz: e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995 | |
| == 2020-05-11 20:07:22,228 easyblock.py:1830 INFO Checking dirs that need to be created: ['/eb/arch-znver2/software/flex/2.6.4-GCCcore-10.1.0', '/eb/arch-znver2/modules/all/flex', '/eb/arch-znver2/modules/lang/flex'] | |
| == 2020-05-11 20:07:22,228 filetools.py:1494 INFO Creating directory /eb/arch-znver2/software/flex/2.6.4-GCCcore-10.1.0 (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,228 filetools.py:1494 INFO Creating directory /eb/arch-znver2/modules/all/flex (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,228 filetools.py:1494 INFO Creating directory /eb/arch-znver2/modules/lang/flex (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,228 configuremake.py:125 INFO Found recent config.guess at /eb/sources/generic/eb_v4.2.1.dev0/ConfigureMake/config.guess, using it if required | |
| == 2020-05-11 20:07:22,228 build_log.py:265 INFO creating build dir, resetting environment... | |
| == 2020-05-11 20:07:22,228 easyblock.py:2968 INFO Starting ready step | |
| == 2020-05-11 20:07:22,228 easyblock.py:2974 INFO Running method check_readiness_step part of step ready | |
| == 2020-05-11 20:07:22,231 easyblock.py:1654 INFO Setting parallelism: 16 | |
| == 2020-05-11 20:07:22,255 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2020-05-11 20:07:22,255 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2020-05-11 20:07:22,255 easyblock.py:1693 WARNING Loaded modules detected: ['EasyBuild-znver2'] | |
| == 2020-05-11 20:07:22,255 easyblock.py:2974 INFO Running method make_builddir part of step ready | |
| == 2020-05-11 20:07:22,255 filetools.py:1494 INFO Creating directory /eb/arch-znver2/build/flex/2.6.4/GCCcore-10.1.0 (parents: True, set_gid: False, sticky: False) | |
| == 2020-05-11 20:07:22,255 easyblock.py:2974 INFO Running method reset_env part of step ready | |
| == 2020-05-11 20:07:22,255 easyblock.py:2974 INFO Running method handle_iterate_opts part of step ready | |
| == 2020-05-11 20:07:22,255 build_log.py:265 INFO unpacking... | |
| == 2020-05-11 20:07:22,255 easyblock.py:2968 INFO Starting source step | |
| == 2020-05-11 20:07:22,255 easyblock.py:2974 INFO Running method checksum_step part of step source | |
| == 2020-05-11 20:07:22,257 easyblock.py:1846 INFO Checksum verification for /eb/sources/f/flex/flex-2.6.4.tar.gz using e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995 passed. | |
| == 2020-05-11 20:07:22,257 easyblock.py:2974 INFO Running method extract_step part of step source | |
| == 2020-05-11 20:07:22,257 easyblock.py:1933 INFO Unpacking source flex-2.6.4.tar.gz | |
| == 2020-05-11 20:07:22,257 run.py:222 INFO running cmd: tar xzf /eb/sources/f/flex/flex-2.6.4.tar.gz | |
| == 2020-05-11 20:07:22,285 build_log.py:265 INFO patching... | |
| == 2020-05-11 20:07:22,286 easyblock.py:2968 INFO Starting patch step | |
| == 2020-05-11 20:07:22,286 easyblock.py:2974 INFO Running method patch_step part of step patch | |
| == 2020-05-11 20:07:22,286 build_log.py:265 INFO preparing... | |
| == 2020-05-11 20:07:22,286 easyblock.py:2968 INFO Starting prepare step | |
| == 2020-05-11 20:07:22,286 easyblock.py:2974 INFO Running method prepare_step part of step prepare | |
| == 2020-05-11 20:07:22,311 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:124 in __init__): Missing modules for dependencies (use --robot?): Bison/3.6.1-GCCcore-10.1.0, help2man/1.47.15-GCCcore-10.1.0, binutils/2.34, M4/1.4.18-GCCcore-10.1.0 (at easybuild/tools/toolchain/toolchain.py:503 in _check_dependencies) | |
| == 2020-05-11 20:07:22,311 filetools.py:1604 INFO Removing lock /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock... | |
| == 2020-05-11 20:07:22,311 filetools.py:329 INFO Path /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock successfully removed. | |
| == 2020-05-11 20:07:22,311 filetools.py:1608 INFO Lock removed: /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_flex_2.6.4-GCCcore-10.1.0.lock | |
| == 2020-05-11 20:07:22,311 easyblock.py:3238 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): Bison/3.6.1-GCCcore-10.1.0, help2man/1.47.15-GCCcore-10.1.0, binutils/2.34, M4/1.4.18-GCCcore-10.1.0 | |
| == 2020-05-11 20:07:22,311 easyblock.py:295 INFO Closing log for application name flex version 2.6.4 |
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