gistfile1.txt

$ python testInstallation.py
llvm-symbolizer: Unknown command line argument '--default-arch=x86_64'.  Try: '/usr/bin/llvm-symbolizer -help'
llvm-symbolizer: Did you mean '-disable-ssc=x86_64'?
==13656==WARNING: external symbolizer didn't start up correctly!
==13656==WARNING: Trying to symbolize code, but external symbolizer is not initialized!
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMAmoebaReference.so+0x586890): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMCUDA.so+0x599370): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMCPU.so+0x3168e0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeReference.so+0xa2760): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeCUDA.so+0xcbfb0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMOpenCL.so+0xc101f0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDCUDA.so+0xf89d0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDReference.so+0x99400): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeOpenCL.so+0x75870): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDOpenCL.so+0x808b0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:201:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMPME.so+0x4da90): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMAmoebaReference.so+0x5868b0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeReference.so+0xa2780): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeCUDA.so+0xcbfd0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDCUDA.so+0xf89f0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDReference.so+0x99420): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMDrudeOpenCL.so+0x75890): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMRPMDOpenCL.so+0x808d0): note: (unknown) defined here
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:207:13: runtime error: call to function (unknown) through pointer to incorrect function type 'void (*)()'
(/home/rmcgibbo/opt/openmm-master/lib/plugins/libOpenMMPME.so+0x4d6f0): note: (unknown) defined here
There are 4 Platforms available:

/home/rmcgibbo/local/openmm/openmmapi/src/NonbondedForceImpl.cpp:267:26: runtime error: signed integer overflow: 188464 * 23558 cannot be represented in type 'int'
1 Reference - Successfully computed forces
/home/rmcgibbo/local/openmm/olla/src/Platform.cpp:119:19: runtime error: member call on address 0x000002cbb100 which does not point to an object of type 'OpenMM::KernelFactory'
0x000002cbb100: note: object is of type 'OpenMM::CudaKernelFactory'
 00 00 00 00  c0 89 7c 09 12 7f 00 00  88 57 e8 18 12 7f 00 00  20 00 00 00 00 00 00 00  e1 04 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CudaKernelFactory'
/home/rmcgibbo/local/openmm/platforms/cuda/src/CudaKernels.cpp:468:114: runtime error: member call on address 0x000006e0c950 which does not point to an object of type 'OpenMM::Force'
0x000006e0c950: note: object is of type 'OpenMM::HarmonicBondForce'
 00 00 00 00  30 1e c0 16 12 7f 00 00  00 00 00 00 12 7f 00 00  e0 eb 64 05 00 00 00 00  f0 65 65 05
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::HarmonicBondForce'
llvm-symbolizer: Unknown command line argument '--default-arch=x86_64'.  Try: '/usr/bin/llvm-symbolizer -help'
llvm-symbolizer: Did you mean '-disable-ssc=x86_64'?
/home/rmcgibbo/local/openmm/platforms/cuda/src/CudaKernels.cpp:703:115: runtime error: member call on address 0x000007fdfb40 which does not point to an object of type 'OpenMM::Force'
0x000007fdfb40: note: object is of type 'OpenMM::HarmonicAngleForce'
 00 00 00 00  c0 01 c0 16 12 7f 00 00  00 00 00 00 00 00 00 00  00 c5 45 03 00 00 00 00  20 ff 47 03
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::HarmonicAngleForce'
/home/rmcgibbo/local/openmm/platforms/cuda/src/CudaKernels.cpp:940:117: runtime error: member call on address 0x0000025467c0 which does not point to an object of type 'OpenMM::Force'
0x0000025467c0: note: object is of type 'OpenMM::PeriodicTorsionForce'
 00 00 00 00  10 b9 bf 16 12 7f 00 00  00 00 00 00 00 00 00 00  30 1d 70 04 00 00 00 00  60 93 74 04
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::PeriodicTorsionForce'
/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/bits/ios_base.h:98:24: runtime error: load of value 4294967035, which is not a valid value for type 'std::_Ios_Fmtflags'
/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../include/c++/4.7/bits/ios_base.h:78:67: runtime error: load of value 4294967035, which is not a valid value for type 'std::_Ios_Fmtflags'
/home/rmcgibbo/local/openmm/platforms/cuda/src/CudaKernels.cpp:1707:127: runtime error: member call on address 0x000006bf0c00 which does not point to an object of type 'OpenMM::Force'
0x000006bf0c00: note: object is of type 'OpenMM::NonbondedForce'
 00 00 00 00  c0 c5 bf 16 12 7f 00 00  00 00 00 00 04 00 00 00  00 00 00 00 00 00 f0 3f  00 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::NonbondedForce'
/home/rmcgibbo/local/openmm/platforms/cuda/src/CudaKernels.cpp:1731:128: runtime error: member call on address 0x000006bf0c00 which does not point to an object of type 'OpenMM::Force'
0x000006bf0c00: note: object is of type 'OpenMM::NonbondedForce'
 00 00 00 00  c0 c5 bf 16 12 7f 00 00  00 00 00 00 04 00 00 00  00 00 00 00 00 00 f0 3f  00 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::NonbondedForce'
2 CUDA - Successfully computed forces
/home/rmcgibbo/local/openmm/platforms/cpu/src/CpuKernels.cpp:475:32: runtime error: member call on address 0x0000099abbf0 which does not point to an object of type 'OpenMM::KernelImpl'
0x0000099abbf0: note: object is of type 'OpenMM::CpuCalcNonbondedForceKernel'
 00 00 00 00  e0 a4 73 01 12 7f 00 00  88 bb 9a 09 00 00 00 00  70 c2 cc 02 00 00 00 00  01 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CpuCalcNonbondedForceKernel'
/home/rmcgibbo/local/openmm/olla/src/Kernel.cpp:64:15: runtime error: member access within address 0x000004e070d0 which does not point to an object of type 'OpenMM::KernelImpl'
0x000004e070d0: note: object is of type 'OpenMM::CpuCalcPmeReciprocalForceKernel'
 00 00 00 00  b0 b3 08 f5 11 7f 00 00  58 26 ad 06 00 00 00 00  70 c2 cc 02 00 00 00 00  01 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CpuCalcPmeReciprocalForceKernel'
/home/rmcgibbo/local/openmm/olla/src/Kernel.cpp:50:15: runtime error: member access within address 0x000004e070d0 which does not point to an object of type 'OpenMM::KernelImpl'
0x000004e070d0: note: object is of type 'OpenMM::CpuCalcPmeReciprocalForceKernel'
 00 00 00 00  b0 b3 08 f5 11 7f 00 00  58 26 ad 06 00 00 00 00  70 c2 cc 02 00 00 00 00  02 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CpuCalcPmeReciprocalForceKernel'
/home/rmcgibbo/local/openmm/olla/src/Kernel.cpp:51:19: runtime error: member access within address 0x000004e070d0 which does not point to an object of type 'OpenMM::KernelImpl'
0x000004e070d0: note: object is of type 'OpenMM::CpuCalcPmeReciprocalForceKernel'
 00 00 00 00  b0 b3 08 f5 11 7f 00 00  58 26 ad 06 00 00 00 00  70 c2 cc 02 00 00 00 00  01 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CpuCalcPmeReciprocalForceKernel'
<unknown>: runtime error: member call on address 0x000004e070d0 which does not point to an object of type 'OpenMM::KernelImpl'
0x000004e070d0: note: object is of type 'OpenMM::CpuCalcPmeReciprocalForceKernel'
 00 00 00 00  b0 b3 08 f5 11 7f 00 00  58 26 ad 06 00 00 00 00  70 c2 cc 02 00 00 00 00  00 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::CpuCalcPmeReciprocalForceKernel'
3 CPU - Successfully computed forces
/home/rmcgibbo/local/openmm/platforms/opencl/src/OpenCLKernels.cpp:490:116: runtime error: member call on address 0x000006e0c950 which does not point to an object of type 'OpenMM::Force'
0x000006e0c950: note: object is of type 'OpenMM::HarmonicBondForce'
 00 00 00 00  30 1e c0 16 12 7f 00 00  00 00 00 00 12 7f 00 00  e0 eb 64 05 00 00 00 00  f0 65 65 05
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::HarmonicBondForce'
/home/rmcgibbo/local/openmm/platforms/opencl/src/OpenCLKernels.cpp:719:117: runtime error: member call on address 0x000007fdfb40 which does not point to an object of type 'OpenMM::Force'
0x000007fdfb40: note: object is of type 'OpenMM::HarmonicAngleForce'
 00 00 00 00  c0 01 c0 16 12 7f 00 00  00 00 00 00 00 00 00 00  00 c5 45 03 00 00 00 00  20 ff 47 03
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::HarmonicAngleForce'
/home/rmcgibbo/local/openmm/platforms/opencl/src/OpenCLKernels.cpp:950:119: runtime error: member call on address 0x0000025467c0 which does not point to an object of type 'OpenMM::Force'
0x0000025467c0: note: object is of type 'OpenMM::PeriodicTorsionForce'
 00 00 00 00  10 b9 bf 16 12 7f 00 00  00 00 00 00 00 00 00 00  30 1d 70 04 00 00 00 00  60 93 74 04
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::PeriodicTorsionForce'
/home/rmcgibbo/local/openmm/platforms/opencl/src/OpenCLKernels.cpp:1653:127: runtime error: member call on address 0x000006bf0c00 which does not point to an object of type 'OpenMM::Force'
0x000006bf0c00: note: object is of type 'OpenMM::NonbondedForce'
 00 00 00 00  c0 c5 bf 16 12 7f 00 00  00 00 00 00 04 00 00 00  00 00 00 00 00 00 f0 3f  00 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::NonbondedForce'
/home/rmcgibbo/local/openmm/platforms/opencl/src/OpenCLKernels.cpp:1677:130: runtime error: member call on address 0x000006bf0c00 which does not point to an object of type 'OpenMM::Force'
0x000006bf0c00: note: object is of type 'OpenMM::NonbondedForce'
 00 00 00 00  c0 c5 bf 16 12 7f 00 00  00 00 00 00 04 00 00 00  00 00 00 00 00 00 f0 3f  00 00 00 00
              ^~~~~~~~~~~~~~~~~~~~~~~
              vptr for 'OpenMM::NonbondedForce'
4 OpenCL - Successfully computed forces

Median difference in forces between platforms:

Reference vs. CUDA: 3.66211e-06
Reference vs. CPU: 4.15045e-06
CUDA vs. CPU: 3.40665e-06
Reference vs. OpenCL: 3.63975e-06
CUDA vs. OpenCL: 1.14769e-06
CPU vs. OpenCL: 3.51914e-06