config.js (aka main.js)

config.js

require.config({
    deps: [
            'main',
            'util/jquery.cookie',
            'util/sprintf',
            'util/uri',
            'util/hashids',
            'util/sha1'
    ],
    paths: {
        // application javascript.
        libs: '../assets/js',
        // Libraries
        util: '../vendor/js/utilities',
        plugins: '../vendor/js/plugins',
        jquery:'../vendor/js/jquery-1.9.1.min',
        underscore: '../vendor/js/underscore-1.4.4.min',
        //backbone: '../vendor/js/backbone-0.9.9.min',
        backbone: '../vendor/js/backbone',
        stackmob: '../vendor/js/stackmob-0.7.0',
        stripe: '../vendor/js/stripe/v1/stripe',
        qunit: 'tests/qunit/1.11.0/qunit',
        //jasmine:'tests/jasmine/1.3.1/jasmine',
        //'jasmine-html':'tests/jasmine/1.3.1/jasmine-html',
        text: '../vendor/js/text'
    },

    shim: {
        underscore: {
            exports: '_'
        },
        backbone: {
            deps: ['underscore'],
            exports: 'Backbone'
        },
        stackmob: {
            deps: ['backbone'],
            exports: 'StackMob'
        },
        'util/hashids': [],
        'util/uri': [],
        'util/sprintf': [],
        'util/sha1': [],
        'util/jquery.cookie': [],
        'plugins/backbone.safe' : ['backbone'],
        'plugins/backbone.layoutmanager': ['backbone'],
        'plugins/backbone.modal' : ['backbone'],
        'plugins/backbone.validation.amd' : ['backbone'],
        qunit: {
            
            exports: 'QUnit'
        }
    }
});

define( ["stackmob", "stripe", "qunit"],
    function(StackMob, Stripe, QUnit) {
        // Initialize StackMob API
        StackMob.init({
            appName: "mycreate",
            clientSubdomain: "",
            publicKey: "",
            apiVersion: 0,
            userSchema: "user",
            apiURL: "https://api.stackmob.com/"
        });

        //TODO: swap out for production key
        Stripe.setPublishableKey('');

        QUnit.config.autostart = false;
        QUnit.start(); //Tests loaded, run tests
       
    }
);

Looking into it some more, loading QUnit through require seems to cause problems with the runner. I would load it as a separate script tag in the html.