Python file showing issue with (spurious?) overlap in overloads

gistfile1.py

from typing import overload, Literal, List, Tuple, Any

class Example:
    pass

class Prediction:
    pass


class TestMypy:

    @overload
    def __call__(
            self,
            program,
            return_all_scores: Literal[True] = ...,
            return_outputs: Literal[True] = ...,
    ) -> Tuple[float, List[Tuple[Example, Prediction, Any]], List[float]]:
        ...

    @overload
    def __call__(
            self,
            program,
            return_all_scores: Literal[True] = ...,
            return_outputs: Literal[False] = ...,
    ) -> Tuple[float, List[float]]:
        ...

    @overload
    def __call__(
            self,
            program,
            return_all_scores: Literal[False] = ...,
            return_outputs: Literal[True] = ...,
    ) -> Tuple[float, List[Tuple[Example, Prediction, Any]]]:
        ...

    @overload
    def __call__(
            self,
            program,
            return_all_scores: Literal[False] = ...,
            return_outputs: Literal[False] = ...,
    ) -> float:
        ...

    def __call__(
            self,
            program,
            return_all_scores: bool = False,
            return_outputs: bool = False,
    ):
        if return_all_scores:
            if return_outputs:
                return 0.1, [(Example(), Prediction(), 0.1)], [0.1]
            else:
                return 0.1, [0.1]
        elif return_outputs:
            return 0.1, [(Example(), Prediction(), 0.1)]
        else:
            return 0.1

mypy-output.txt

$ poetry run mypy dspy/evaluate/mypy_issue.py
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 2 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 3 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 4 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:22: error: Overloaded function signatures 2 and 3 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:22: error: Overloaded function signatures 2 and 4 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:31: error: Overloaded function signatures 3 and 4 overlap with incompatible return types  [overload-overlap]
Found 6 errors in 1 file (checked 1 source file)

mypy-output2.txt

$ poetry run mypy dspy/evaluate/mypy_issue.py
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 2 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 3 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:13: error: Overloaded function signatures 1 and 4 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:23: error: Overloaded function signatures 2 and 3 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:23: error: Overloaded function signatures 2 and 4 overlap with incompatible return types  [overload-overlap]
dspy/evaluate/mypy_issue.py:33: error: Overloaded function signatures 3 and 4 overlap with incompatible return types  [overload-overlap]
Found 6 errors in 1 file (checked 1 source file)

mypy_issue2.py

from typing import overload, Literal, List, Tuple, Any

class Example:
    pass

class Prediction:
    pass


class TestMypy:

    @overload
    def __call__(
            self,
            program,
            foo: int = ...,
            return_all_scores: Literal[True] = ...,
            return_outputs: Literal[True] = ...,
    ) -> Tuple[float, List[Tuple[Example, Prediction, Any]], List[float]]:
        ...

    @overload
    def __call__(
            self,
            program,
            foo: int = ...,
            return_all_scores: Literal[True] = ...,
            return_outputs: Literal[False] = ...,
    ) -> Tuple[float, List[float]]:
        ...

    @overload
    def __call__(
            self,
            program,
            foo: int = ...,
            return_all_scores: Literal[False] = ...,
            return_outputs: Literal[True] = ...,
    ) -> Tuple[float, List[Tuple[Example, Prediction, Any]]]:
        ...

    @overload
    def __call__(
            self,
            program,
            foo: int = ...,
            return_all_scores: Literal[False] = ...,
            return_outputs: Literal[False] = ...,
    ) -> float:
        ...

    def __call__(
            self,
            program,
            foo: int = 5,
            return_all_scores: bool = False,
            return_outputs: bool = False,
    ):
        if return_all_scores:
            if return_outputs:
                return foo, [(Example(), Prediction(), 0.1)], [0.1]
            else:
                return foo, [0.1]
        elif return_outputs:
            return foo, [(Example(), Prediction(), 0.1)]
        else:
            return foo

Thank you so much! I am very grateful. I made the corresponding changes to the real code from which this MWE was taken and all is well now.