Simon Conseil saimn
saimn
/ Hack-fitting.ipynb
Last active
May 5, 2018 03:10
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saimn
/ gist:bc2190e6e5b7a03284ae1d2ac0eec37b
Created
March 14, 2018 17:23
— forked from tspriggs/gist:989b57a495ab2831a021fb376e18fabc
custom model to fit a 2D moffat model to data, equate that to F_OIII_xy, then pass it to a 1D custom Gaussian equation to get a model spectrum. The idea is to have x, y and l (wavelength) as inputs, then the amplitude is fixed as it is calculated. When I run it I normally get mismatched dimension errors: wavelength is a 271 long list, and then x…
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| def Moffat_3d_test(x, mean, stddev, Gauss_bkg, Gauss_grad, | |
| Moffat_amplitude, x_0, y_0, gamma, alpha, Moffat_bkg): | |
| # Moffat | |
| rr_gg = ((x_fit - x_0)**2 + (y_fit - y_0)**2) / gamma**2 | |
| F_OIII_xy = Moffat_amplitude * (1 + rr_gg)**(-alpha) + Moffat_bkg | |
| # Prep for Gauss 1D | |
| Gauss_std = np.sqrt(stddev**2 + std_MUSE**2) | |
| A_OIII_xy = F_OIII_xy / (np.sqrt(2*np.pi) * Gauss_std) | |
| check_1.append(A_OIII_xy) | |
| model_spectra = [] |
saimn
/ gist:fa76010f83131f525dc747d1dac5840c
Created
December 13, 2017 14:25
Astropy tests with Python 3.7a3 and Numpy 1.14pre
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| ===================================== test session starts ===================================== | |
| platform linux -- Python 3.7.0a3, pytest-3.3.1, py-1.5.2, pluggy-0.6.0 | |
| Running tests with Astropy version 3.0.dev20889. | |
| Running tests in astropy docs. | |
| Date: 2017-12-13T15:20:29 | |
| Platform: Linux-4.14.4-1-ARCH-x86_64-with-arch |
saimn
/ Table to HTML.ipynb
Created
September 13, 2017 20:57
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| --------------------------------------------------------------------------- | |
| TypeError Traceback (most recent call last) | |
| <ipython-input-24-80ea1cd1ef6b> in <module>() | |
| 5 make_nans_transparent=True, embed_avm_tags=True, | |
| 6 vmin_r=vmin, vmin_g=vmin, vmin_b=vmin, vmax_r=vmax, vmax_g=vmax, vmax_b=vmax, | |
| ----> 7 stretch_r='sqrt', stretch_g='sqrt', stretch_b='sqrt') | |
| 8 | |
| 9 rgb_name = IMAGE.replace('IMAGE', 'IMAGE_RGB').replace('.fits', '.jpg') | |
| ~/miniconda3/lib/python3.6/site-packages/aplpy/rgb.py in make_rgb_image(data, output, indices, vmin_r, vmax_r, pmin_r, pmax_r, stretch_r, vmid_r, exponent_r, vmin_g, vmax_g, pmin_g, pmax_g, stretch_g, vmid_g, exponent_g, vmin_b, vmax_b, pmin_b, pmax_b, stretch_b, vmid_b, exponent_b, make_nans_transparent, embed_avm_tags) |
saimn
/ slowtests.txt
Created
June 15, 2017 21:13
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| ================================= slowest 100 test durations ================================== | |
| 31.77s call lib.linux-x86_64-3.6/astropy/stats/tests/test_spatial.py::test_ripley_large_density[points0-0-1] | |
| 30.63s call lib.linux-x86_64-3.6/astropy/stats/tests/test_spatial.py::test_ripley_modes[points0-5-10] | |
| 30.40s call lib.linux-x86_64-3.6/astropy/stats/tests/test_spatial.py::test_ripley_modes[points1--10--5] | |
| 29.69s call lib.linux-x86_64-3.6/astropy/stats/tests/test_spatial.py::test_ripley_large_density[points1--1-0] | |
| 6.32s call lib.linux-x86_64-3.6/astropy/convolution/tests/test_discretize.py::test_gaussian_eval_2D_integrate_mode | |
| 3.33s call lib.linux-x86_64-3.6/astropy/utils/tests/test_timer.py::test_timer | |
| 3.03s call lib.linux-x86_64-3.6/astropy/vo/samp/tests/test_hub.py::test_SAMPHubServer_run_repeated | |
| 3.02s call lib.linux-x86_64-3.6/astropy/vo/samp/tests/test_hub_script.py::test_hub_script | |
| 2.96s call lib.linux-x86_64-3.6/astropy/units/tests/test_units.py::test_compose_fract |
saimn
/ pre-commit
Last active
February 25, 2019 15:06
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| #!/bin/sh | |
| # | |
| # Git pre commit hook which find the next PR number and replace occurences of | |
| # GUESSPR in the changelog | |
| files_modified=`git diff --cached --name-only --diff-filter=ACM` | |
| if [[ $files_modified == *"CHANGES.rst"* ]]; then | |
| ghurl="https://api.github.com/repos/astropy/astropy/issues?state=all&sort=created&direction=desc&per_page=1" | |
| echo "Fetching PR number from $ghurl" |
saimn
/ Spectrum1D tests.ipynb
Last active
April 21, 2017 19:39
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saimn
/ Spectroscopy Tools for MUSE.ipynb
Last active
April 20, 2017 15:31
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saimn
/ Test-JSViewer.ipynb
Created
December 7, 2016 21:09
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